Table 1 Population descriptive parametersa grouped by continental region

From: Haplotype tagging efficiency in worldwide populations in CTLA4 gene

Continental region Population 2N b S fixed Kh Dh Kmax FNF Kh private (%)
Sub-Saharan Africa Bantu (BAN) 40 2 15 0.8974±0.0284 40 0.65 4 (26.67)
  Biaka Pygmies (BPY) 64 1 21 0.9132±0.0172 66 0.70 5 (23.81)
  Mandenka (MAN) 44 2 18 0.9197±0.0208 41 0.59 3 (16.67)
  Mbuti Pygmies (MPY) 30 2 15 0.9310±0.0241 30 0.53 4 (26.67)
  San (SAN)c 14 5      
  Tanzan (TAN) 64 1 16 0.8150±0.0326 58 0.75 4 (25.00)
  Yoruba (YOR) 38 2 13 0.9033±0.0248 37 0.69 4 (30.77)
  Mean 294   16 0.8966 45 0.65 4.00 (24.93)
North-Africa Moroccan (MRA) 70 0 21 0.8538±0.0253 69 0.72 3 (14.29)
  Mozabite (MOZ) 60 2 20 0.8288±0.0424 58 0.68 4 (20.00)
  Saharaui (SAH) 106 0 28 0.8659±0.0225 104 0.75 7 (25.00)
  Mean 236   23 0.8495 77 0.71 4.67 (19.76)
Middle East Bedouin (BED) 88 0 21 0.8655±0.0258 87 0.77 3 (13.64)
  Druze (DRU) 88 0 26 0.9295±0.0122 84 0.71 9 (34.62)
  Palestinian (PAL) 102 0 20 0.8676±0.0199 95 0.81 5 (25.00)
  Mean 278   22 0.8875 89 0.76 5.67 (24.42)
Europe Adygei (ADY) 34 0 9 0.8235±0.0517 34 0.78 2 (22.22)
  Basque (BAS) 82 0 19 0.8645±0.0233 79 0.78 6 (31.58)
  Catalan (CAT) 40 0 14 0.8474±0.0380 40 0.68 1 (7.14)
  Continental Italian (CIT) 42 0 15 0.8374±0.0497 44 0.69 1 (6.67)
  French (FRE) 46 0 15 0.7923±0.0434 46 0.70 5 (33.33)
  French Basque (FRB) 48 0 11 0.7926±0.0419 47 0.80 1 (9.09)
  Orcadian (ORC) 32 1 6 0.6915±0.0666 32 0.87 0 (0.00)
  Russian (RUS) 50 0 14 0.7608±0.0430 49 0.74 0 (0.00)
  Sardinian (SAR) 54 0 14 0.8435±0.0335 38 0.67 2 (14.29)
  Spanish (SPA) 142 0 25 0.8544±0.0197 136 0.83 8 (32.00)
  Mean 570   14 0.8108 54 0.75 2.50 (14.52)
Central/South Asia Balochi (BAL) 48 0 14 0.7730±0.0584 47 0.73 2 (14.29)
  Brahui (BRA) 50 0 13 0.7869±0.0490 49 0.77 1 (7.69)
  Burusho (BUR) 50 0 11 0.6400±0.0704 49 0.81 0 (0.00)
  Hazara (HAZ) 46 0 9 0.7662±0.0394 47 0.85 0 (0.00)
  Kalash (KAL) 50 1 10 0.6278±0.0752 49 0.83 1 (10.00)
  Makrani (MAK) 44 1 11 0.5920±0.0863 43 0.78 2 (18.18)
  Pathan (PAT) 48 1 9 0.6108±0.0737 48 0.85 1 (11.11)
  Sindhi (SIN) 50 1 11 0.7053±0.0636 49 0.81 1 (9.09)
  Mean 386   11 0.6878 48 0.80 1.00 (8.80)
East Asia Cambodian (CAM) 22 1 7 0.7965±0.0669 22 0.75 1 (14.29)
  Han (HAN) 88 1 11 0.7806±0.0223 89 0.90 3 (27.27)
  Japanese (JAP) 54 1 13 0.8050±0.0297 56 0.79 3 (23.08)
  North China (NCH) 134 1 17 0.7800±0.0208 124 0.88 1 (5.88)
  South China (SCH) 140 1 20 0.8599±0.0146 132 0.86 6 (30.00)
  Yakut (YAK) 50 1 13 0.7437±0.0538 47 0.76 1 (7.69)
  Mean 486   14 0.7943 78 0.82 2.50 (18.04)
Oceania Nan Melanesian (NAN) 36 1 8 0.6556±0.0750 42 0.82 4 (50.00)
  Papuan (PAP) 30 2 8 0.8161±0.0427 30 0.78 2 (25.00)
  Mean 66   8 0.7359 36 0.80 2.50 (29.17)
America Colombian (COL) 26 1 7 0.7662±0.0522 26 0.79 2 (28.57)
  Karitiana (KAR) 46 2 4 0.5295±0.0444 45 0.95 0 (0.00)
  Maya (MAY) 46 0 10 0.7420±0.0424 45 0.81 0 (0.00)
  Pima (PIM) 46 5 8 0.7159±0.0393 45 0.86 1 (12.50)
  Surui (SUR) 42 7 3 0.4866±0.0530 40 0.97 0 (0.00)
  Mean 206   6 0.6480 40 0.88 0.60 (8.21)
  1. a2N (number of chromosomes); S fixed (number of nonpolymorphic SNPs); Kh (total number of haplotypes); Dh (haplotype diversity); Kmax (number of haplotypes expected under equilibrium); FNF (fraction of haplotypes not found for each population); Kh private (%) (number of nonshared haplotypes and percentage)
  2. b2N is not averaged. The value given corresponds to the total number of chromosomes in the geographical group.
  3. cSan haplotypes have not being estimated.