Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Letter
  • Published:

Conformational mutations in human mitochondrial DNA

Abstract

Variation in the human mitochondrial DNA (mtDNA) sequence has been extensively analysed using restriction fragment length polymorphisms (RFLPs)1–11. MtDNA RFLPs have previously been attributed to nucleotide changes within restriction endonuclease recognition sites1–10 or to small insertion–deletion mutations11. We now report that RFLPs detected by polyacrylamide gel electrophoresis can also result from single nucleotide substitutions which alter the mobility of small- to medium-sized restriction fragments that incorporate the sequence. We have defined the mutation responsible at two loci and have identified several possible additional loci. When screening human mtDNAs with multiple restriction endonucleases, such mutations can be misidentified as insertion–deletion mutations or counted as multiple polymorphic restriction sites. This can lead to errors in constructing restriction maps and estimating sequence diversity.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Similar content being viewed by others

References

  1. Brown, W. M. & Goodman, H. M. in Extrachromosomal DNA (eds Cummings, D. J. et al.) 15, 485–499 (Academic, New York, 1979).

    Book  Google Scholar 

  2. Brown, W. M. Proc. natn. Acad. Sci. U.S.A. 77, 3605–3609 (1980).

    Article  ADS  CAS  Google Scholar 

  3. Cann, R. L., Brown, W. M. & Wilson, A. C. Genetics 106, 479–499 (1984).

    CAS  PubMed  PubMed Central  Google Scholar 

  4. Denaro, M. et al. Proc. natn. Acad. Sci. U.S.A. 78, 5768–5772 (1981).

    Article  ADS  CAS  Google Scholar 

  5. Blanc, H., Chen, K.-H., D'Amore, M. A. & Wallace, D. C. Am. J. hum. Genet. 35, 167–176 (1983).

    CAS  PubMed  PubMed Central  Google Scholar 

  6. Johnson, M. J., Wallace, D. C., Ferris, S. D., Rattazi, M. C. & Cavalli-Sforza, L. L. J. molec. Evol. 19, 255–271 (1983).

    Article  ADS  CAS  PubMed  Google Scholar 

  7. Wallace, D. C., Garrison, K. & Knowler, W. C. Am. J. phys. Anthrop, 68, 149–155 (1985).

    Article  CAS  PubMed  Google Scholar 

  8. Brega, A. et al. Am. J. hum. Genet. 39, 502–512 (1986).

    CAS  PubMed  PubMed Central  Google Scholar 

  9. Brega, A. et al. Ann. hum. Genet. 50, 327–338 (1986).

    Article  CAS  PubMed  Google Scholar 

  10. Wallace, D. C. in Medical and Experimental Mammalian Genetics: A Perspective (eds McKusick, V. et al.) 137–190 (Liss, New York, 1987).

    Google Scholar 

  11. Cann, R. L. & Wilson, A. C. Genetics 104, 699–711 (1983).

    CAS  PubMed  PubMed Central  Google Scholar 

  12. Anderson, S. et al. Nature 290, 457–465 (1981).

    Article  ADS  CAS  PubMed  Google Scholar 

  13. Bossi, L. & Smith, D. M. Cell 39, 643–652 (1984).

    Article  CAS  PubMed  Google Scholar 

  14. Snyder, M., Buchman, A. R. & Davis, R. W. Nature 324, 87–89 (1986).

    Article  ADS  CAS  PubMed  Google Scholar 

  15. Zahn, K. & Blattner, R. F. Nature 317, 451–453 (1985).

    Article  ADS  CAS  PubMed  Google Scholar 

  16. Kitchin, P. A. et al. J. biol. Chem. 261, 11302–11309 (1986).

    CAS  PubMed  Google Scholar 

  17. Griffith, J., Bleyman, M., Rauch, C. A., Kitchin, P. A. & Englund, P. T. Cell 46, 717–724 (1986).

    Article  CAS  PubMed  Google Scholar 

  18. Trifonov, E. N., & Sussman, J. L. Proc. natn. Acad. Sci. U.S.A. 77, 3816–3820 (1980).

    Article  ADS  CAS  Google Scholar 

  19. Ulanovsky, L. E. & Trifonov, E. N. Nature 326, 720–722 (1987).

    Article  ADS  CAS  PubMed  Google Scholar 

  20. Wu, H.-M. & Crothers, D. M. Nature 308, 509–513 (1984).

    Article  ADS  CAS  PubMed  Google Scholar 

  21. Koo, H.-S., Wu, H.-M. & Crothers, D. M. Nature 320, 501–506 (1986).

    Article  ADS  CAS  PubMed  Google Scholar 

  22. Wrischnik, L. A. et al. Nucleic Acids Res. 15, 529–542 (1987).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Cann, R. L., Stoneking, M. & Wilson, A. C. Nature 325, 31–36 (1987).

    Article  ADS  CAS  PubMed  Google Scholar 

  24. Oliver, N. A., Greenberg, B. D. & Wallace, D. C. J. biol. Chem. 259, 5834–5839 (1983).

    Google Scholar 

  25. Greenberg, B. D., Newbold, J. E. & Sugino, A. Gene 21, 33–49 (1983).

    Article  CAS  PubMed  Google Scholar 

  26. Vawter, L. & Brown, W. M. Science 234, 194–196 (1986).

    Article  ADS  CAS  PubMed  Google Scholar 

  27. Sanger, F., Nicklens, S. & Coulson, A. R. Proc. natn. Acad. Sci. U.S.A. 74, 5463–5467 (1977).

    Article  ADS  CAS  Google Scholar 

  28. Howell, N. Plasmid 14, 93–96 (1985).

    Article  CAS  PubMed  Google Scholar 

  29. Howell, N., Appel, J., Cook, J. P., Howell, B. & Hauswirth, W. W. J. biol. Chem. 262, 2411–2414 (1987).

    CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Singh, G., Neckelmann, N. & Wallace, D. Conformational mutations in human mitochondrial DNA. Nature 329, 270–272 (1987). https://doi.org/10.1038/329270a0

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/329270a0

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing