Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Original Article
  • Published:

Identification of a novel tumor transforming gene GAEC1 at 7q22 which encodes a nuclear protein and is frequently amplified and overexpressed in esophageal squamous cell carcinoma

Abstract

By comparative DNA fingerprinting, we identified a 357-bp DNA fragment frequently amplified in esophageal squamous cell carcinomas (ESCC). This fragment overlaps with an expressed sequence tag mapped to 7q22. Further 5′ and 3′-rapid amplification of cDNA ends revealed that it is part of a novel, single-exon gene with full-length mRNA of 2052 bp and encodes a nuclear protein of 109 amino acids (15 kDa). This gene, designated as gene amplified in esophageal cancer 1 (GAEC1), was located within a 1–2 Mb amplicon at 7q22.1 identified by high-resolution 1 Mb array- comparative genomic hybridization in 6/10 ESCC cell lines. GAEC1 was ubiquitously expressed in normal tissues including esophageal and gastrointestinal organs; with amplification and overexpression in 6/10 (60%) ESCC cell lines and 34/99 (34%) primary tumors. Overexpression of GAEC1 in 3T3 mouse fibroblasts caused foci formation and colony formation in soft agar, comparable to H-ras and injection of GAEC1-transfected 3T3 cells into athymic nude mice formed undifferentiated sarcoma in vivo, indicating that GAEC1 is a transforming oncogene. Although no significant correlation was observed between GAEC1 amplification and clinicopathological parameters and prognosis, our study demonstrated that overexpressed GAEC1 has tumorigenic potential and suggest that overexpressed GAEC1 may play an important role in ESCC pathogenesis.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1
Figure 2
Figure 3
Figure 4
Figure 5
Figure 6
Figure 7
Figure 8

Similar content being viewed by others

References

  • Ahmed MN, Kim K, Haddad B, Berchuck A, Qumsiyeh MB . (2000). Comparative genomic hybridization studies in hydatidiform moles and choriocarcinoma: amplification of 7q21-q31 and loss of 8p12-p21 in choriocarcinoma. Cancer Genet Cytogenet 116: 10–15.

    Article  CAS  Google Scholar 

  • Ariyama Y, Mori T, Shinomiya T, Sakabe T, Fukuda Y, Kanamaru A et al. (1999). Chromosomal imbalances in adult T-cell leukemia revealed by comparative genomic hybridization: gains at 14q32 and 2p16-22 in cell lines. J Hum Genet 44: 357–363.

    Article  CAS  Google Scholar 

  • Beaudoing E, Freier S, Wyatt JR, Claverie JM, Gautheret D . (2000). Patterns of variant polyadenylation signal usage in human genes. Genome Res 10: 1001–1010.

    Article  CAS  Google Scholar 

  • Deng W, Tsao SW, Guan XY, Lucas JN, Si HX, Leung CS et al. (2004). Distinct profiles of critically short telomeres are a key determinant of different chromosome aberrations in immortalized human cells: whole-genome evidence from multiple cell lines. Oncogene 23: 9090–9101.

    Article  CAS  Google Scholar 

  • Forozan F, Mahlamaki EH, Monni O, Chen Y, Veldman R, Jiang Y et al. (2000). Comparative genomic hybridization analysis of 38 breast cancer cell lines: a basis for interpreting complementary DNA microarray data. Cancer Res 60: 4519–4525.

    CAS  PubMed  Google Scholar 

  • Fujibe T, Saji H, Watahiki MK, Yamamoto KT . (2006). Overexpression of the RADICAL-INDUCED CELL DEATH1 (RCD1) gene of Arabidopsis causes weak rcd1 phenotype with compromised oxidative-stress responses. Biosci Biotechnol Biochem 70: 1827–1831.

    Article  CAS  Google Scholar 

  • Glockner G, Scherer S, Schattevoy R, Boright A, Weber J, Tsui LC et al. (1998). Large-scale sequencing of two regions in human chromosome 7q22: analysis of 650 kb of genomic sequence around the EPO and CUTL1 loci reveals 17 genes. Genome Res 8: 1060–1073.

    Article  CAS  Google Scholar 

  • Greer CE, Peterson SL, Kiviat NB, Manos MM . (1991). PCR amplification from paraffin-embedded tissues. Effects of fixative and fixation time. Am J Clin Pathol 95: 117–124.

    Article  CAS  Google Scholar 

  • Hu YC, Lam KY, Law S, Wong J, Srivastava G . (2001). Identification of differentially expressed genes in esophageal squamous cell carcinoma (ESCC) by cDNA expression array: overexpression of Fra-1, Neogenin, Id-1, and CDC25B genes in ESCC. Clin Cancer Res 7: 2213–2221.

    CAS  PubMed  Google Scholar 

  • Hurst CD, Fiegler H, Carr P, Williams S, Carter NP, Knowles MA . (2004). High-resolution analysis of genomic copy number alterations in bladder cancer by microarray-based comparative genomic hybridization. Oncogene 23: 2250–2263.

    Article  CAS  Google Scholar 

  • Ince N, de la Monte SM, Wands JR . (2000). Overexpression of human aspartyl (asparaginyl) beta-hydroxylase is associated with malignant transformation. Cancer Res 60: 1261–1266.

    CAS  PubMed  Google Scholar 

  • Kang K, Kubin M, Cooper KD, Lessin SR, Trinchieri G, Rook AH . (1996). IL-12 synthesis by human Langerhans cells. J Immunol 156: 1402–1407.

    CAS  PubMed  Google Scholar 

  • Keenan C, Kelleher D . (1998). Protein kinase C and the cytoskeleton. Cell Signal 10: 225–232.

    Article  CAS  Google Scholar 

  • Kozak M . (1987). An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res 15: 8125–8148.

    Article  CAS  Google Scholar 

  • Kwong D, Lam A, Guan X, Law S, Tai A, Wong J et al. (2004). Chromosomal aberrations in esophageal squamous cell carcinoma among Chinese: gain of 12p predicts poor prognosis after surgery. Hum Pathol 35: 309–316.

    Article  CAS  Google Scholar 

  • Lam AK . (2000). Molecular biology of esophageal squamous cell carcinoma. Crit Rev Oncol Hematol 33: 71–90.

    Article  CAS  Google Scholar 

  • Litchfield DW, Luscher B . (1993). Casein kinase II in signal transduction and cell cycle regulation. Mol Cell Biochem 127–128: 187–199.

    Article  Google Scholar 

  • Nowell PC . (1989). Chromosomal and molecular clues to tumor progression. Semin Oncol 16: 116–127.

    CAS  PubMed  Google Scholar 

  • Solinas-Toldo S, Wallrapp C, Muller-Pillasch F, Bentz M, Gress T, Lichter P . (1996). Mapping of chromosomal imbalances in pancreatic carcinoma by comparative genomic hybridization. Cancer Res 56: 3803–3807.

    CAS  PubMed  Google Scholar 

  • Tang JC, Lam KY, Law S, Wong J, Srivastava G . (2001). Detection of genetic alterations in esophageal squamous cell carcinomas and adjacent normal epithelia by comparative DNA fingerprinting using inter-simple sequence repeat PCR. Clin Cancer Res 7: 1539–1545.

    CAS  PubMed  Google Scholar 

  • Watters DJ, Parsons PG . (1999). Critical targets of protein kinase C in differentiation of tumour cells. Biochem Pharmacol 58: 383–388.

    Article  CAS  Google Scholar 

  • Yang ZQ, Yoshida MA, Fukuda Y, Kurihara N, Nakamura Y, Inazawa J . (2000). Molecular cytogenetic analysis of 17 renal cancer cell lines: increased copy number at 5q31-33 in cell lines from nonpapillary carcinomas. Jpn J Cancer Res 91: 156–163.

    Article  CAS  Google Scholar 

  • Ying J, Li H, Seng TJ, Langford C, Srivastava G, Tsao SW et al. (2006). Functional epigenetics identifies a protocadherin PCDH10 as a candidate tumor suppressor for nasopharyngeal, esophageal and multiple other carcinomas with frequent methylation. Oncogene 25: 1070–1080.

    Article  CAS  Google Scholar 

Download references

Acknowledgements

The work on GAEC1 was supported by an RGC grant (PolyU 5262/02 M, JT and GS) and array-CGH work was supported by an RGC Central Allocation Grant (CA06/07.SC03, QT) of Hong Kong.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to J C O Tang.

Additional information

Supplementary Information accompanies the paper on the Oncogene website (http://www.nature.com/onc)

Supplementary information

Rights and permissions

Reprints and permissions

About this article

Cite this article

Law, F., Chen, Y., Wong, K. et al. Identification of a novel tumor transforming gene GAEC1 at 7q22 which encodes a nuclear protein and is frequently amplified and overexpressed in esophageal squamous cell carcinoma. Oncogene 26, 5877–5888 (2007). https://doi.org/10.1038/sj.onc.1210390

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/sj.onc.1210390

Keywords

This article is cited by

Search

Quick links