Review
The Pharmacogenomics Journal (2005) 5, 226–243. doi:10.1038/sj.tpj.6500320
Genetic factors influencing Pyrimidine-antagonist chemotherapy
J G Maring1, H J M Groen2, F M Wachters2, D R A Uges3 and E G E de Vries4
- 1Department of Pharmacy, Diaconessen Hospital Meppel & Bethesda Hospital Hoogeveen, Meppel, The Netherlands
- 2Department of Pulmonary Diseases, University of Groningen & University Medical Center Groningen, Groningen, The Netherlands
- 3Department of Pharmacy, University of Groningen & University Medical Center Groningen, Groningen, The Netherlands
- 4Department of Medical Oncology, University of Groningen & University Medical Center Groningen, Groningen, The Netherlands
Correspondence: Dr JG Maring, Department of Pharmacy, Diaconessen Hospital Meppel & Bethesda Hospital Hoogeveen, Hoogeveenseweg 38, 7943KA Meppel, The Netherlands. Tel: +31 522 234900; Fax: +31 522 243900; E-mail: maring@diacmeppel.nl
Received 17 December 2004; Revised 3 May 2005; Accepted 5 May 2005.
Abstract
Pyrimidine antagonists, for example, 5-fluorouracil (5-FU), cytarabine (ara-C) and gemcitabine (dFdC), are widely used in chemotherapy regimes for colorectal, breast, head and neck, non-small-cell lung cancer, pancreatic cancer and leukaemias. Extensive metabolism is a prerequisite for conversion of these pyrimidine prodrugs into active compounds. Interindividual variation in the activity of metabolising enzymes can affect the extent of prodrug activation and, as a result, act on the efficacy of chemotherapy treatment. Genetic factors at least partly explain interindividual variation in antitumour efficacy and toxicity of pyrimidine antagonists. In this review, proteins relevant for the efficacy and toxicity of pyrimidine antagonists will be summarised. In addition, the role of germline polymorphisms, tumour-specific somatic mutations and protein expression levels in the metabolic pathways and clinical pharmacology of these drugs are described. Germline polymorphisms of uridine monophosphate kinase (UMPK), orotate phosphoribosyl transferase (OPRT), thymidylate synthase (TS), dihydropyrimidine dehydrogenase (DPD) and methylene tetrahydrofolate reductase (MTHFR) and gene expression levels of OPRT, UMPK, TS, DPD, uridine phosphorylase, uridine kinase, thymidine phosphorylase, thymidine kinase, deoxyuridine triphosphate nucleotide hydrolase are discussed in relation to 5-FU efficacy. Cytidine deaminase (CDD) and 5'-nucleotidase (5NT) gene polymorphisms and CDD, 5NT, deoxycytidine kinase and MRP5 gene expression levels and their potential relation to dFdC and ara-C cytotoxicity are reviewed.
Keywords:
pyrimidine antagonists, 5-fluorouracil, gemcitabine, cytarabine, polymorphisms, mutations, gene expression
Abbreviations:
AML, acute myeloid leukaemia; ara-C, cytarabine; ara-CMP, cytarabine monophosphate; ara-U, uracil-arabinoside; BSA, body surface area; BUP1,
-ureidopropionase; CDD, cytidine deaminase; CMF, cyclophosphamide, methotrexate and 5-fluorouracil; CMP, deoxycytidine monophosphate; CYP450, cytochrome P450; CYP1A2, cytochrome P450 1A2; CYP2A6, cytochrome P450 2A6; CYP2C8, cytochrome P450 2C8; dCDP, deoxycytidine diphosphate; dCK, deoxycytidine kinase; dCTP, deoxycytidine triphosphate; dFCR, 5'-deoxy-5-fluorocytidine; dFdC, gemcitabine; dFdCDP, gemcitabine diphosphate; dFdCMP, gemcitabine monophosphate; dFdCTP, gemcitabine triphosphate; dFdU, 2'-deoxy-2', 2'-difluorouridine; dFdUMP, 2'-deoxy-2', 2'-difluorouridine monophosphate; dFUR, 5'-deoxy-5-fluorouridine; DPD, dihydropyrimidine dehydrogenase; DPYD, dihydropyrimidine dehydrogenase gene; DPYS, dihydropyrimidinase; dTMP, deoxy-thymidine monophosphate; dUMP, deoxyuridine monophosphate; dUTP, deoxy-uridine triphosphate; dUTPase, dUTP nucleotidohydrolase; ECGF, endothelial cell growth factor; FdUDP, 5-fluoro-deoxy-uridine-diphosphate; FdUMP, 5-fluoro-deoxy-uridine monophosphate; FdUTP, 5-fluoro-deoxy-uridine-triphosphate; 5-FU, 5-fluorouracil; FUDP, 5-fluoro-uridine-diphosphate; FUDR, 5-fluoro-deoxy-uridine; FUMP, 5-fluoro-uridine-monophosphate; FUTP, 5-fluoro-uridine-triphosphate; IFN, interferon; IHC, immunohistochemistry; LV, leucovorin; MITO, mitomycine; MITOX, mitoxantrone; MRP, multi-drug resistance protein; MTHFR, methylene tetrahydrofolate reductase; MTX, methotrexate; 5NT, 5'-nucleotidase; OPRT, orotate phosphoribosyl transferase; RNR, ribonucleotide reductase; SNP, single-nucleotide polymorphism; TK, thymidine kinase; TP, thymidine phosphorylase; TS, thymidine synthase; UDPK, uridine diphosphate kinase; UK, uridine kinase; UMPK, uridine monophosphate kinase; UP, uridine phosphorylase; USF, upstream stimulatory factor
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