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Repurposing non-pharmacological interventions for Alzheimer's disease through link prediction on biomedical literature
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A novel corpus of molecular to higher-order events that facilitates the understanding of the pathogenic mechanisms of idiopathic pulmonary fibrosis
- Nozomi Nagano
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Integrated multi-omics analysis of Alzheimer’s disease shows molecular signatures associated with disease progression and potential therapeutic targets
- Pradeep Kodam
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Effects of monensin supplementation on lactation performance of dairy cows: a systematic review and dose–response meta‑analysis
- M. R. Rezaei Ahvanooei
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Outcome of pulpotomy in permanent teeth with irreversible pulpitis: a systematic review and meta-analysis
- Amber Ather
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A bioinformatics approach to the identification of novel deleterious mutations of human TPMT through validated screening and molecular dynamics
- Sidharth Saxena
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Integrated network-based multiple computational analyses for identification of co-expressed candidate genes associated with neurological manifestations of COVID-19
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Understanding the genetics of viral drug resistance by integrating clinical data and mining of the scientific literature
- An Goto
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- & Garrett M. Morris
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A computational pipeline for functional gene discovery
- Aolani Colon
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TrendyGenes, a computational pipeline for the detection of literature trends in academia and drug discovery
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Leveraging network analysis to evaluate biomedical named entity recognition tools
- Eduardo P. García del Valle
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The microRNA analysis portal is a next-generation tool for exploring and analyzing miRNA-focused data in the literature
- Stefano Pirrò
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Discovering microbe-disease associations from the literature using a hierarchical long short-term memory network and an ensemble parser model
- Yesol Park
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Predictive modeling of clinical trial terminations using feature engineering and embedding learning
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Structural insights and evaluation of the potential impact of missense variants on the interactions of SLIT2 with ROBO1/4 in cancer progression
- Debmalya Sengupta
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Microbe-set enrichment analysis facilitates functional interpretation of microbiome profiling data
- Yan Kou
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Exploring food contents in scientific literature with FoodMine
- Forrest Hooton
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MAGPEL: an autoMated pipeline for inferring vAriant-driven Gene PanEls from the full-length biomedical literature
- Nafiseh Saberian
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Automatic extraction, prioritization and analysis of gut microbial metabolites from biomedical literature
- QuanQiu Wang
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Characterization of Matricellular Protein Expression Signatures in Mechanistically Diverse Mouse Models of Kidney Injury
- Daniel Feng
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Integrative analysis of clinical and bioinformatics databases to identify anticancer properties of digoxin
- Satoshi Yokoyama
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Article
| Open AccessUse of Natural Language Processing to identify Obsessive Compulsive Symptoms in patients with schizophrenia, schizoaffective disorder or bipolar disorder
- David Chandran
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Extracellular matrix composition of connective tissues: a systematic review and meta-analysis
- Turney J. McKee
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SMAC, a computational system to link literature, biomedical and expression data
- Stefano Pirrò
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Predictions of novel Schistosoma mansoni - human protein interactions consistent with experimental data
- J. White Bear
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SciRide Finder: a citation-based paradigm in biomedical literature search
- Adam Volanakis
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Toxicity Classification of Oxide Nanomaterials: Effects of Data Gap Filling and PChem Score-based Screening Approaches
- My Kieu Ha
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Constructing Genetic Networks using Biomedical Literature and Rare Event Classification
- Amira Al-Aamri
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Testing scientific models using Qualitative Reasoning: Application to cellulose hydrolysis
- Kamal Kansou
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Systematic Assessment of the Climate Sensitivity of Important Human and Domestic Animals Pathogens in Europe
- K. Marie McIntyre
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Machine learning workflow to enhance predictions of Adverse Drug Reactions (ADRs) through drug-gene interactions: application to drugs for cutaneous diseases
- Kalpana Raja
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An analysis of disease-gene relationship from Medline abstracts by DigSee
- Jeongkyun Kim
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A novel algorithm for analyzing drug-drug interactions from MEDLINE literature
- Yin Lu
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An evidence-based knowledgebase of metastasis suppressors to identify key pathways relevant to cancer metastasis
- Min Zhao
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Exploring novel mechanistic insights in Alzheimer’s disease by assessing reliability of protein interactions
- Ashutosh Malhotra
- , Erfan Younesi
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miRegulome: a knowledge-base of miRNA regulomics and analysis
- Debmalya Barh
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dbEMT: an epithelial-mesenchymal transition associated gene resource
- Min Zhao
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Pedican: an online gene resource for pediatric cancers with literature evidence
- Min Zhao
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TRRUST: a reference database of human transcriptional regulatory interactions
- Heonjong Han
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Potential routes of plastics biotransformation involving novel plastizymes revealed by global multi-omic analysis of plastic associated microbes