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| Open AccessBat species assemblage predicts coronavirus prevalence
Human encroachment into nature alters species communities and can lead to changes in disease dynamics. Here, Meyer et al. find that coronavirus prevalence increased in less diverse bat communities, which were dominated by susceptible host species.
- Magdalena Meyer
- , Dominik W. Melville
- & Simone Sommer
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| Open AccessInverse relationship between species competitiveness and intraspecific trait variability may enable species coexistence in experimental seedling communities
Intraspecific trait variation could influence competitive interactions among species. Here, the authors show that higher intraspecific variation in seedling traits and performance may enable competitively inferior plant species to coexist with competitively superior species.
- Jing Yang
- , Xiya Wang
- & Guochun Shen
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| Open AccessGenome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities
Identifying the metabolic interactions that underlie microbial communities is challenging. Here, the authors combine Tara Oceans -omics data with co-activity networks and genome-scale metabolic models to predict biotic interactions among planktonic prokaryotes in the upper ocean.
- Nils Giordano
- , Marinna Gaudin
- & Samuel Chaffron
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| Open AccessNon-native ants are breaking down biogeographic boundaries and homogenizing community assemblages
Global biogeographic patterns have resulted from millions of years of evolution. Here, the authors show that the global dispersal of non-native ant species is rapidly redefining these biogeographic patterns by homogenizing species assemblages, disproportionally affecting tropical regions and islands.
- Lucie Aulus-Giacosa
- , Sébastien Ollier
- & Cleo Bertelsmeier
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| Open AccessCross-basin and cross-taxa patterns of marine community tropicalization and deborealization in warming European seas
Climate change is shifting species distribution globally. Here, the authors track four decades of changes in the thermal affinity of 1,817 marine species across European seas, showing that most communities have responded to ongoing ocean warming via increases of warm-water species or decreases of cold-water species.
- Guillem Chust
- , Ernesto Villarino
- & Martin Lindegren
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| Open AccessEffects of plant diversity on productivity strengthen over time due to trait-dependent shifts in species overyielding
Species-rich plant communities often have higher productivity than monocultures. Here, the authors analyse biodiversity-ecosystem functioning experiments in grasslands and forests and find that the biodiversity effects on community productivity strengthen over time thanks to shifts in contributions of species with different resource acquisition traits.
- Liting Zheng
- , Kathryn E. Barry
- & Yann Hautier
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| Open AccessDiverging effects of host density and richness across biological scales drive diversity-disease outcomes
A core challenge is to understand how biodiversity shapes infectious disease across scales. Here, infection assays combined with sampling of amphibian communities show that host richness consistently reduces transmission, but increases in density weaken the effect at the community scale.
- Pieter T. J. Johnson
- , Tara E. Stewart Merrill
- & Andy Fenton
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| Open AccessWarming underpins community turnover in temperate freshwater and terrestrial communities
Predicting species responses to climate change may be complicated by the influence of other factors. Here, the authors report that warming is linked to terrestrial and freshwater community shifts towards warm-adapted species overall, but body size, thermal niche breadth, species richness and baseline temperature modulate the trends.
- Imran Khaliq
- , Christian Rixen
- & Anita Narwani
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| Open AccessMarine protected areas promote stability of reef fish communities under climate warming
Protected areas are meant to defend species from direct exploitation and habitat loss, but they might also reduce climate change impacts. Here, the authors show that marine protected areas mitigate the impacts of marine heatwaves on reef fish communities.
- Lisandro Benedetti-Cecchi
- , Amanda E. Bates
- & Eneko Aspillaga
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| Open AccessEffects of human disturbances on wildlife behaviour and consequences for predator-prey overlap in Southeast Asia
Prior studies showed that humans are causing species to become more active at night. Here the authors show that this trend is not consistent across hyperdiverse wildlife communities, as camera trap surveys in Southeast Asia show that responses depend on species traits and do not affect the temporal overlap of biotic interactions.
- Samuel Xin Tham Lee
- , Zachary Amir
- & Matthew Scott Luskin
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| Open AccessA slow-fast trait continuum at the whole community level in relation to land-use intensification
Although co-occurring species may differ widely in their response traits, coordinated functional trait shifts may emerge at the community level in response to environmental factors. Here, the authors use data from 150 grassland sites to identify a coordinated slow-fast strategy response to land-use intensification across above- and belowground taxa.
- Margot Neyret
- , Gaëtane Le Provost
- & Peter Manning
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| Open AccessSteeper size spectra with decreasing phytoplankton biomass indicate strong trophic amplification and future fish declines
Using a global synthesis of size spectra data from pelagic food webs, this study finds that size structure is not driven by temperature as often suggested, but by the nutrient status of the system. This means that modest phytoplankton declines projected for key fishing grounds at mid-latitudes will amplify into substantial reductions in the supportable biomass of fish.
- Angus Atkinson
- , Axel G. Rossberg
- & Constantin Frangoulis
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| Open AccessClimate-driven invasion and incipient warnings of kelp ecosystem collapse
Climate change is redistributing species poleward, threatening widespread socio-ecological disruption as key tipping-points are exceeded. This study examines space-time dynamics of kelp ecosystem collapse over a 15-year period along the warming coastline of eastern Tasmania and shows that an early-warning signal of kelp ecosystem collapse is recognisable well-in-advance.
- Scott D. Ling
- & John P. Keane
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Article
| Open AccessUnfamiliarity generates costly aggression in interspecific avian dominance hierarchies
Although intraspecific dominance hierarchies are common, large scale interspecific dominance hierarchies are unknown. Using data from hundreds of avian species, the authors find that species that are more familiar with each other engage in less aggression and the aggression is resolved more directly.
- Gavin M. Leighton
- , Jonathan P. Drury
- & Eliot T. Miller
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| Open AccessSeasonal variation in dragonfly assemblage colouration suggests a link between thermal melanism and phenology
Body colour may be an important factor in insect phenology. Here, the authors show that colour lightness of dragonfly assemblages from the UK, collected between May and October from 1990-2020, varies in response to seasonal changes in solar radiation, suggesting a link between colour-based thermoregulation and insect phenology.
- Roberto Novella-Fernandez
- , Roland Brandl
- & Christian Hof
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| Open AccessEdge effects on tree architecture exacerbate biomass loss of fragmented Amazonian forests
Forest responses can have major effects on tree architecture and community structure near the edges of forest fragments. Here, using terrestrial LiDAR scanning data from long-term forest plots, the authors find a net negative effect of fragmentation on Amazonian Forest aboveground biomass.
- Matheus Henrique Nunes
- , Marcel Caritá Vaz
- & Eduardo Eiji Maeda
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Article
| Open AccessA global synthesis and assessment of free-ranging domestic cat diet
Free-ranging domestic cats have major ecological impacts globally. Here, Lepczyk et al. compile records of the species consumed by cats, identifying thousands of species consumed, including hundreds of species that are of conservation concern.
- Christopher A. Lepczyk
- , Jean E. Fantle-Lepczyk
- & John C. Z. Woinarski
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| Open AccessDung removal increases under higher dung beetle functional diversity regardless of grazing intensification
Ecosystem services provided by dung beetles are an underappreciated component of terrestrial ecosystems. Here, the authors report a standardized distributed experiment which shows that dung removal rate, a key ecosystem process in pastures, is greater under high beetle functional diversity regardless of grazing intensity.
- Jorge Ari Noriega
- , Joaquín Hortal
- & Ana M. C. Santos
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| Open AccessRegulation of species metabolism in synthetic community systems by environmental pH oscillations
Most synthetic communities are unidirectional or two-way interaction without dynamic feedback. Here, the authors report a dynamic feedback system involving artificial cell species, biological cell species, and their environment using pH-sensitive molecule that phase-shift between fluid and gel phases.
- Shubin Li
- , Yingming Zhao
- & Xiaojun Han
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| Open AccessA latitudinal gradient in Darwin’s naturalization conundrum at the global scale for flowering plants
Alien species could be either more or less likely to become naturalized where closely related species occur. This study reveals a global latitudinal pattern whereby successfully naturalized alien plants are more closely related to natives at higher latitudes, reinforced by human modification of the environment.
- Shu-ya Fan
- , Qiang Yang
- & Mark van Kleunen
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| Open AccessMultidimensional responses of grassland stability to eutrophication
Anthropogenic eutrophication is a driver of plant community shifts in many grassland ecosystems. Here, the authors use data from a globally distributed experiment to assess how nutrient addition affects multiple facets of grassland ecological stability and their correlations.
- Qingqing Chen
- , Shaopeng Wang
- & Yann Hautier
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| Open AccessAccelerated body size evolution in upland environments is correlated with recent speciation in South American freshwater fishes
While speciation rates vary across regions, the causes of this disparity and its impact on biodiversity patterns still puzzle scientists. Studying South American fish speciation, Cerezer et al. uncover key associations of body size evolution—especially rapid changes in uplands—with accelerated speciation.
- Felipe O. Cerezer
- , Cristian S. Dambros
- & Catherine H. Graham
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| Open AccessThe role of intra-guild indirect interactions in assembling plant-pollinator networks
Colonizer establishment produces fundamental building blocks that shape the structure of assembling pollination networks. In this model, while colonizers leverage indirect competition to establish, adaptive foraging by pollinators maintains species coexistence which produces nested networks.
- Sabine Dritz
- , Rebecca A. Nelson
- & Fernanda S. Valdovinos
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| Open AccessDisruption of trait-environment relationships in African megafauna occurred in the middle Pleistocene
Mammalian megafaunal biodiversity has declined since the Plio-Pleistocene. Here, the authors apply ecometric methods to evaluate the functional link between eastern African herbivorous megafauna and their environments, showing that some biodiversity loss coincided with community ecological function disturbance.
- Daniel A. Lauer
- , A. Michelle Lawing
- & Jenny L. McGuire
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| Open AccessHerbivory and nutrients shape grassland soil seed banks
Seed banks are reservoirs of plant diversity. This study shows that nutrient addition decreases diversity of grassland seed banks, increases their similarity to aboveground communities and interacts with aboveground herbivory to affect their abundance.
- Anu Eskelinen
- , Maria-Theresa Jessen
- & Lauren L. Sullivan
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| Open AccessTop-down identification of keystone taxa in the microbiome
Keystone taxa in ecological communities are native taxa that have an especially important role in the stability of their ecosystem. This study introduces a novel method for detecting keystones in microbial communities by comparing data with and without specific species.
- Guy Amit
- & Amir Bashan
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| Open AccessRelationships of temperature and biodiversity with stability of natural aquatic food webs
Climate change effects on food webs may be modulated by ecological variables. Here, the authors report how planktonic food web stability depends on temperature and biodiversity, and show that trophic dynamics and synchrony help elucidate the patterns.
- Qinghua Zhao
- , Paul J. Van den Brink
- & Frederik De Laender
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| Open AccessGlobally consistent response of plant microbiome diversity across hosts and continents to soil nutrients and herbivores
Drivers responsible for plant microbiome variation between sites remain elusive. Here, the authors test how soil nutrient addition and herbivore exclusion affect plant microbiota in grasslands worldwide, showing that microbiota diversity responded to environmental variation similarly across sites.
- Eric W. Seabloom
- , Maria C. Caldeira
- & Elizabeth T. Borer
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| Open AccessClarifying the effect of biodiversity on productivity in natural ecosystems with longitudinal data and methods for causal inference
Isolating the relationships between biodiversity and ecosystem functioning in natural ecosystems is challenging. Here, the authors apply a causal inference approach to observational data from grasslands and find a negative effect of biodiversity on productivity driven by non-native and rare species.
- Laura E. Dee
- , Paul J. Ferraro
- & Michel Loreau
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| Open AccessTemperate functional niche availability not resident-invader competition shapes tropicalisation in reef fishes
This study examines how the tropicalisation of shallow reefs changes functional niches for fishes in Japan and Australia. They discover that functional niches in tropical-temperate transitional communities are asynchronously invaded by tropical species, mediated more by habitat availability than competition with resident temperate species.
- Mark G. R. Miller
- , James D. Reimer
- & Maria Beger
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| Open AccessExperimental warming causes mismatches in alpine plant-microbe-fauna phenology
Phenological shifts driven by climate change are well-studied in plants and aboveground animals, but scarcely in belowground biota. Here, the authors show that soil warming causes phenological mismatches between plants, soil microbes and soil microarthropods in an alpine meadow.
- Rui Yin
- , Wenkuan Qin
- & Biao Zhu
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| Open AccessEnvironmental heterogeneity modulates the effect of plant diversity on the spatial variability of grassland biomass
The insurance hypothesis posits that more diverse communities are more stable through time. Here, the authors show that plant biodiversity reduces the spatial variability of productivity in grassland communities, demonstrating that the insurance hypothesis applies also across space.
- Pedro Daleo
- , Juan Alberti
- & Yann Hautier
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Article
| Open AccessHigher productivity in forests with mixed mycorrhizal strategies
Trees often associate with mycorrhizal fungi, arbuscular mycorrhizal (AM) or ectomycorrhizal (ECM) fungi. Luo et al. analyze 74,563 forest plots across the contiguous USA, showing that forests with mixed AM and ECM tree species are more productive than when dominated by AM or ECM tree species.
- Shan Luo
- , Richard P. Phillips
- & Nico Eisenhauer
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| Open AccessContribution of tree community structure to forest productivity across a thermal gradient in eastern Asia
The link between forest productivity, species diversity and climate remains contentious. Here, Kohyama et al. examine stand productivity and tree diversity in old-growth forests from Japan to Indonesia, showing that warmer sites are more productive, largely due to small-biomass species.
- Tetsuo I. Kohyama
- , Douglas Sheil
- & Takashi S. Kohyama
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| Open AccessA density functional theory for ecology across scales
Modelling diverse ecological phenomena across scales with a single mathematical framework is challenging. Here, the authors draw on density functional theory to develop a framework that bridges between mechanistic theories at fine scales and statistical models at large scales.
- Martin-I. Trappe
- & Ryan A. Chisholm
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| Open AccessNovel plant–frugivore network on Mauritius is unlikely to compensate for the extinction of seed dispersers
Many plant species depend on frugivores for seed dispersal. Here, the authors investigate plant-frugivore networks in Mauritius, finding that the new interactions gained from the arrival of non-native seed predators are unlikely to compensate for the extinction of seed dispersers.
- Julia H. Heinen
- , F. B. Vincent Florens
- & Michael K. Borregaard
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| Open AccessFaunal engineering stimulates landscape-scale accretion in southeastern US salt marshes
The contribution of animal ecosystem engineers to coastal geomorphological processes is often neglected. Here, the authors combine observational, experimental and modelling work to demonstrate that ecosystem engineering by mussels is a much stronger driver of salt marsh accretion rates than expected.
- Sinéad M. Crotty
- , Daniele Pinton
- & Christine Angelini
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| Open AccessClimate-trait relationships exhibit strong habitat specificity in plant communities across Europe
Climatic variables are useful but often weak predictors of plant functional trait variation across ecosystems. Here the authors investigate how assigning plant communities to a habitat hierarchy improves the explanatory power of climate-trait relationships at the continental scale.
- Stephan Kambach
- , Francesco Maria Sabatini
- & Helge Bruelheide
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| Open AccessDivergent roles of herbivory in eutrophying forests
Ungulate herbivory is an important driver of ecological change in forests. Here, the authors combine vegetation resurveys showing herbivory effects are highly dependent on soil eutrophication, promoting non-natives under high N-conditions, yet benefiting threatened species under low N-conditions.
- Josiane Segar
- , Henrique M. Pereira
- & Ingmar R. Staude
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| Open AccessNumber of simultaneously acting global change factors affects composition, diversity and productivity of grassland plant communities
Multiple co-acting environmental pressures could affect ecosystems in ways not predictable based on single factors or pairwise combinations. Here, the authors show that the number of global change factors affects productivity, species composition and diversity of grassland plant communities.
- Benedikt Speißer
- , Rutger A. Wilschut
- & Mark van Kleunen
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| Open AccessBiodiversity stabilizes plant communities through statistical-averaging effects rather than compensatory dynamics
Positive relationships between biodiversity and temporal stability through species asynchrony are well-documented, but the underlying mechanisms remain debated. Here, the authors show that statistical averaging is the main mechanism of plant diversity effects on community stability.
- Lei Zhao
- , Shaopeng Wang
- & Daniel C. Reuman
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Article
| Open AccessBiodiversity–stability relationships strengthen over time in a long-term grassland experiment
Biodiversity-ecosystem functioning relationships may change over time. Here, Wagg et al. show that richness-productivity and richness stability relationships grow stronger over time in an experimental grassland community, and shed light on the ecological mechanisms.
- Cameron Wagg
- , Christiane Roscher
- & Bernhard Schmid
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Article
| Open AccessDifferent roles of concurring climate and regional land-use changes in past 40 years’ insect trends
Drivers of long-term trends in insect populations are usually inferred from space-for-time substitution studies rather than from time-series data. Here, the authors investigate insect trends across a 40-year period in Switzerland and test their linkages with climate change, land use change and their interactions.
- Felix Neff
- , Fränzi Korner-Nievergelt
- & Eva Knop
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Article
| Open AccessIncreases in reef size, habitat and metacommunity complexity associated with Cambrian radiation oxygenation pulses
During the Cambrian Radiation, oxygenation occurred in a series of short pulses. Here, the authors quantify episodic changes in reef size, extent of habitat and in metacommunity ecological complexity associated with these oxygenation pulses by examining archaeocyath sponges.
- Andrey Yu. Zhuravlev
- , Emily G. Mitchell
- & Amelia Penny
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| Open AccessPlant genetic diversity affects multiple trophic levels and trophic interactions
Plant intraspecific diversity genetic diversity could affect also other trophic levels. This meta-analysis shows that increasing plant genetic diversity improves the performance of plants and natural enemies of herbivores, while decreasing the performance of plant antagonists.
- Nian-Feng Wan
- , Liwan Fu
- & Christoph Scherber
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Article
| Open AccessConsistent diel activity patterns of forest mammals among tropical regions
Temporal niche partitioning is an important feature of animal communities. Here, Vallejo-Vargas and colleagues analyze standardized camera trap survey data from protected areas across the tropics to investigate diel patterns of forest mammals in relation to body mass and trophic guild.
- Andrea F. Vallejo-Vargas
- , Douglas Sheil
- & Richard Bischof
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Article
| Open AccessBlue and green food webs respond differently to elevation and land use
Aquatic (blue) and terrestrial (green) food webs are part of the same landscape, but it remains unclear whether they respond similarly to shared environmental gradients. Using long-term monitoring data from Switzerland and a metaweb approach, this study reveals how inferred blue and green food webs exhibit different properties along an elevation gradient and among land-use types.
- Hsi-Cheng Ho
- , Jakob Brodersen
- & Florian Altermatt
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| Open AccessA functional vulnerability framework for biodiversity conservation
At a time when protecting the environment is urgent, dealing with inherent uncertainties in the responses of biodiversity to disturbances is essential. This study promotes a promising tool to assess the vulnerability of species assemblages to guide protection efforts even if species response and disturbance regimes are poorly documented.
- Arnaud Auber
- , Conor Waldock
- & David Mouillot
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| Open AccessRaptors avoid the confusion effect by targeting fixed points in dense aerial prey aggregations
Flocking, schooling, and swarming prey are thought to benefit from a confusion effect. However, here the authors show that hawks attacking swarming bats avoid confusion by steering towards a fixed point in the swarm instead of targeting any one individual.
- Caroline H. Brighton
- , Laura N. Kloepper
- & Graham K. Taylor