Subjects - Techniques and methods

  • Animals

    • Getting past the pump

      Nature Methods
      1 December 2004

    • Large-scale database searching using tandem mass spectra: Looking up the answer in the back of the book

      Nature Methods
      18 November 2004

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Bioinformatics for the 'bench biologist': how to find regulatory regions in genomic DNA

      Nature Immunology
      1 August 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • TEAM: a tool for the integration of expression, and linkage and association maps

      European Journal of Human Genetics
      28 April 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

    • Mining microarray data to identify transcription factors expressed in naïve resting but not activated T lymphocytes

      Genes and Immunity
      1 January 2004

  • Archaea

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Arthropods

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • RNAi living-cell microarrays for loss-of-function screens in Drosophila melanogaster cells

      Nature Methods
      21 October 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Bacteria

    • Accurate multiplex gene synthesis from programmable DNA microchips

      Nature
      23 December 2004

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Genome-scale models of microbial cells: evaluating the consequences of constraints

      Nature Reviews Microbiology
      1 November 2004

    • Seeing is believing: the impact of structural genomics on antimicrobial drug discovery

      Nature Reviews Microbiology
      1 September 2004

    • Analysis of genomic context: prediction of functional associations from conserved bidirectionally transcribed gene pairs

      Nature Biotechnology
      30 June 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Functional genomics: Guilt by multiple association

      Heredity
      7 April 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

    • Antimicrobial drug discovery through bacteriophage genomics

      Nature Biotechnology
      11 January 2004

  • Chordates

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Eukaryotes

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • RNAi in a postmodern, postgenomic era

      Oncogene
      1 November 2004

    • RNA interference-based functional genomics in cancer research – an introduction

      Oncogene
      1 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Cell-free protein production and labeling protocol for NMR-based structural proteomics

      Nature Methods
      21 October 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Firmicutes

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Fungi

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • High-resolution genome-wide mapping of histone modifications

      Nature Biotechnology
      4 July 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Expression profiling using a hexamer-based universal microarray

      Nature Biotechnology
      14 March 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

    • Intensity-based protein identification by machine learning from a library of tandem mass spectra

      Nature Biotechnology
      18 January 2004

  • Green plants

    • A proposed framework for the description of plant metabolomics experiments and their results

      Nature Biotechnology
      6 December 2004

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Centromeric heterochromatin comes clean with DNA methylation

      Nature Methods
      1 October 2004

    • Whole-genome fractionation rapidly purifies DNA from centromeric regions

      Nature Methods
      29 September 2004

    • Analysis of the transcriptional complexity of Arabidopsis thaliana by massively parallel signature sequencing

      Nature Biotechnology
      11 July 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Human

    • Immunoaffinity profiling of tyrosine phosphorylation in cancer cells

      Nature Biotechnology
      12 December 2004

    • Intergenomic consensus in multifactorial inheritance loci: the case of multiple sclerosis

      Genes and Immunity
      1 December 2004

    • Too much information? Not for long

      Nature Methods
      1 December 2004

    • Characterisation of breast fine-needle aspiration biopsies by centrosome aberrations and genomic instability

      British Journal of Cancer
      23 November 2004

    • Production of complex nucleic acid libraries using highly parallel in situ oligonucleotide synthesis

      Nature Methods
      18 November 2004

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Promoter prediction analysis on the whole human genome

      Nature Biotechnology
      4 November 2004

    • The Collaborative Cross, a community resource for the genetic analysis of complex traits

      Nature Genetics
      1 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Shotgun sequence assembly and recent segmental duplications within the human genome

      Nature
      21 October 2004

    • A highly informative SNP linkage panel for human genetic studies

      Nature Methods
      21 October 2004

    • Identifying and quantifying in vivo methylation sites by heavy methyl SILAC

      Nature Methods
      21 October 2004

    • Microarray-based, high-throughput gene expression profiling of microRNAs

      Nature Methods
      21 October 2004

    • SAGE takes a look at the 5' end

      Nature Methods
      1 October 2004

    • Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics

      Nature Biotechnology
      15 August 2004

    • Genomic profiling of interpopulation diversity guides prioritization of candidate-genes for autoimmunity

      Genes and Immunity
      22 July 2004

    • Assessment of clonal relationships in ipsilateral and bilateral multiple breast carcinomas by comparative genomic hybridisation and hierarchical clustering analysis

      British Journal of Cancer
      13 July 2004

    • A multivariate analysis of genomic polymorphisms: prediction of clinical outcome to 5-FU/oxaliplatin combination chemotherapy in refractory colorectal cancer

      British Journal of Cancer
      22 June 2004

    • Proteomic-based identification of haptoglobin-1 precursor as a novel circulating biomarker of ovarian cancer

      British Journal of Cancer
      15 June 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • TEAM: a tool for the integration of expression, and linkage and association maps

      European Journal of Human Genetics
      28 April 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • Identification and characterisation of constitutional chromosome abnormalities using arrays of bacterial artificial chromosomes

      British Journal of Cancer
      23 February 2004

    • A tiling resolution DNA microarray with complete coverage of the human genome

      Nature Genetics
      15 February 2004

    • Predicting biomarkers for ovarian cancer using gene-expression microarrays

      British Journal of Cancer
      9 February 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

    • The HUPO PSI's Molecular Interaction format—a community standard for the representation of protein interaction data

      Nature Biotechnology
      30 January 2004

    • A physical and functional map of the human TNF-alpha/NF-kappaB signal transduction pathway

      Nature Cell Biology
      25 January 2004

    • Intensity-based protein identification by machine learning from a library of tandem mass spectra

      Nature Biotechnology
      18 January 2004

  • Mammals

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • 5,000 RNAi experiments on a chip

      Nature Methods
      1 November 2004

    • Cloning of short hairpin RNAs for gene knockdown in mammalian cells

      Nature Methods
      1 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Genotyping over 100,000 SNPs on a pair of oligonucleotide arrays

      Nature Methods
      21 October 2004

    • Getting a handle on protein farnesylation

      Nature Methods
      1 October 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Metagenomics

    • Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes

      Nature Biotechnology
      19 December 2004

    • A proposed framework for the description of plant metabolomics experiments and their results

      Nature Biotechnology
      6 December 2004

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Genome-scale models of microbial cells: evaluating the consequences of constraints

      Nature Reviews Microbiology
      1 November 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Expression profiling using a hexamer-based universal microarray

      Nature Biotechnology
      14 March 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Nematodes

    • High-throughput matchmaking

      Nature Methods
      1 December 2004

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Genome-wide RNAi identifies p53-dependent and -independent regulators of germ cell apoptosis in C. elegans

      Cell Death and Differentiation
      23 July 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Primates

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Proteobacteria

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

  • Rodents

    • Intergenomic consensus in multifactorial inheritance loci: the case of multiple sclerosis

      Genes and Immunity
      1 December 2004

    • Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas

      Nature Methods
      18 November 2004

    • Production of complex nucleic acid libraries using highly parallel in situ oligonucleotide synthesis

      Nature Methods
      18 November 2004

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • SAGE takes a look at the 5' end

      Nature Methods
      1 October 2004

    • Long-range intrachromosomal interactions in the T helper type 2 cytokine locus

      Nature Immunology
      19 September 2004

    • The Knockout Mouse Project

      Nature Genetics
      1 September 2004

    • The European dimension for the mouse genome mutagenesis program

      Nature Genetics
      1 September 2004

    • Bioinformatics for the 'bench biologist': how to find regulatory regions in genomic DNA

      Nature Immunology
      1 August 2004

    • Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture

      Nature Biotechnology
      18 July 2004

    • Mutagenic Insertion and Chromosome Engineering Resource (MICER)

      Nature Genetics
      4 July 2004

    • A public gene trap resource for mouse functional genomics

      Nature Genetics
      1 June 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

    • Intensity-based protein identification by machine learning from a library of tandem mass spectra

      Nature Biotechnology
      18 January 2004

  • Viruses

    • A common open representation of mass spectrometry data and its application to proteomics research

      Nature Biotechnology
      4 November 2004

    • Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources

      Nature Reviews Genetics
      1 November 2004

    • Data standards for 'omic' science

      Nature Biotechnology
      1 May 2004

    • Advanced sequencing technologies: methods and goals

      Nature Reviews Genetics
      1 May 2004

    • Biologists think bigger

      EMBO reports
      1 March 2004

    • TILLING — a high-throughput harvest for functional genomics

      Nature Reviews Genetics
      1 February 2004

    • Antimicrobial drug discovery through bacteriophage genomics

      Nature Biotechnology
      11 January 2004

    • Mining microarray data to identify transcription factors expressed in naïve resting but not activated T lymphocytes

      Genes and Immunity
      1 January 2004

    • All the king's horses and all the king's men...

      Nature Reviews Genetics
      1 January 2004

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