Organisms - Bacteria

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• Chemical genomics

  • title

    Chemical genomics in Escherichia coli identifies an inhibitor of bacterial lipoprotein targeting

    journal

    Nature Chemical Biology

    date

    27 September 2009

    • Abstract
    • Full text
    • PDF (1,210K)

  • title

    Enzymatic assembly of DNA molecules up to several hundred kilobases

    journal

    Nature Methods

    date

    12 April 2009

    • Abstract
    • Full text
    • PDF (220K)

• Comparative, evolutionary and population genomics

  • title

    Comparative genomic and phylogeographic analysis of Mycobacterium leprae

    journal

    Nature Genetics

    date

    1 November 2009

    • Abstract
    • Full text
    • PDF (986K)

  • title

    Genome evolution and adaptation in a long-term experiment with Escherichia coli

    journal

    Nature

    date

    18 October 2009

    • Abstract
    • Full text
    • PDF (376K)

  • title

    The versatility and adaptation of bacteria from the genus Stenotrophomonas

    journal

    Nature Reviews Microbiology

    date

    1 July 2009

    • Abstract
    • Full text
    • PDF (1,564K)

  • title

    The microbial ocean from genomes to biomes

    journal

    Nature

    date

    13 May 2009

    • Abstract
    • Full text
    • PDF (2,147K)

• Genetics of Gene Expression

  • title

    The transcription unit architecture of the Escherichia coli genome

    journal

    Nature Biotechnology

    date

    1 November 2009

    • Abstract
    • Full text
    • PDF (623K)

• Genome sequence and analysis

  • title

    Comparative genomic and phylogeographic analysis of Mycobacterium leprae

    journal

    Nature Genetics

    date

    1 November 2009

    • Abstract
    • Full text
    • PDF (986K)

  • title

    Computational methods for discovering structural variation with next-generation sequencing

    journal

    Nature Methods

    date

    15 October 2009

    • Abstract
    • Full text
    • PDF (490K)

  • title

    Network coverage

    journal

    PSI Structural Genomics Knowledgebase

    date

    14 October 2009

    • Abstract
    • Full text

  • title

    Technology: The sequencing game

    journal

    Nature Reviews Genetics

    date

    1 August 2009

    • Full text
    • PDF (132K)

  • title

    Unravelling ancient microbial history with community proteogenomics and lipid geochemistry

    journal

    Nature Reviews Microbiology

    date

    1 August 2009

    • Abstract
    • Full text
    • PDF (352K)

  • title

    The versatility and adaptation of bacteria from the genus Stenotrophomonas

    journal

    Nature Reviews Microbiology

    date

    1 July 2009

    • Abstract
    • Full text
    • PDF (1,564K)

  • title

    Small RNAs: Microbial metatranscriptomics goes deep

    journal

    Nature Reviews Genetics

    date

    9 June 2009

    • Full text
    • PDF (121K)

  • title

    Application of 'next-generation' sequencing technologies to microbial genetics

    journal

    Nature Reviews Microbiology

    date

    23 February 2009

    • Abstract
    • Full text
    • PDF (434K)

  • title

    Host genetics: Opening the door to TB

    journal

    Nature Reviews Microbiology

    date

    1 February 2009

    • Full text
    • PDF (240K)

• Glycomics

  • title

    Unravelling ancient microbial history with community proteogenomics and lipid geochemistry

    journal

    Nature Reviews Microbiology

    date

    1 August 2009

    • Abstract
    • Full text
    • PDF (352K)

• Metabolomics/nomics

  • title

    Systematic phenome analysis of Escherichia coli multiple-knockout mutants reveals hidden reactions in central carbon metabolism

    journal

    Molecular Systems Biology

    date

    15 September 2009

    • Abstract
    • Full text
    • PDF (2,878K)

  • title

    Metabolomics-driven quantitative analysis of ammonia assimilation in E. coli

    journal

    Molecular Systems Biology

    date

    18 August 2009

    • Abstract
    • Full text
    • PDF (2,508K)

  • title

    Unravelling ancient microbial history with community proteogenomics and lipid geochemistry

    journal

    Nature Reviews Microbiology

    date

    1 August 2009

    • Abstract
    • Full text
    • PDF (352K)

• Pharmacogenomics

  • title

    Drug interactions and the evolution of antibiotic resistance

    journal

    Nature Reviews Microbiology

    date

    1 June 2009

    • Abstract
    • Full text
    • PDF (999K)

• Proteomics

  • title

    The transcription unit architecture of the Escherichia coli genome

    journal

    Nature Biotechnology

    date

    1 November 2009

    • Abstract
    • Full text
    • PDF (623K)

  • title

    Network coverage

    journal

    PSI Structural Genomics Knowledgebase

    date

    14 October 2009

    • Abstract
    • Full text

  • title

    One system to express them all

    journal

    PSI Structural Genomics Knowledgebase

    date

    14 October 2009

    • Abstract
    • Full text

  • title

    Comparative analysis to guide quality improvements in proteomics

    journal

    Nature Methods

    date

    1 October 2009

    • Abstract
    • Full text
    • PDF (498K)

  • title

    The power of SAXS

    journal

    PSI Structural Genomics Knowledgebase

    date

    16 September 2009

    • Abstract
    • Full text

  • title

    Proteomics: Getting the numbers right

    journal

    Nature Reviews Molecular Cell Biology

    date

    1 September 2009

    • Full text
    • PDF (186K)

  • title

    Proteome-wide cellular protein concentrations of the human pathogen Leptospira interrogans

    journal

    Nature

    date

    15 July 2009

    • Abstract
    • Full text
    • PDF (626K)

• Systems biology

  • title

    Evolution of biomolecular networks — lessons from metabolic and protein interactions

    journal

    Nature Reviews Molecular Cell Biology

    date

    1 November 2009

    • Abstract
    • Full text
    • PDF (764K)

  • title

    The second wave of synthetic biology: from modules to systems

    journal

    Nature Reviews Molecular Cell Biology

    date

    1 June 2009

    • Abstract
    • Full text
    • PDF (540K)

  • title

    Drug interactions and the evolution of antibiotic resistance

    journal

    Nature Reviews Microbiology

    date

    1 June 2009

    • Abstract
    • Full text
    • PDF (999K)

  • title

    Using movies to analyse gene circuit dynamics in single cells

    journal

    Nature Reviews Microbiology

    date

    1 May 2009

    • Abstract
    • Full text
    • PDF (884K)

  • title

    The role of predictive modelling in rationally re-engineering biological systems

    journal

    Nature Reviews Microbiology

    date

    2 March 2009

    • Abstract
    • Full text
    • PDF (475K)

• Techniques and methods

  • title

    Computation for ChIP-seq and RNA-seq studies

    journal

    Nature Methods

    date

    15 October 2009

    • Abstract
    • Full text
    • PDF (1,014K)

  • title

    Computational methods for discovering structural variation with next-generation sequencing

    journal

    Nature Methods

    date

    15 October 2009

    • Abstract
    • Full text
    • PDF (490K)

  • title

    One system to express them all

    journal

    PSI Structural Genomics Knowledgebase

    date

    14 October 2009

    • Abstract
    • Full text

  • title

    Comparative analysis to guide quality improvements in proteomics

    journal

    Nature Methods

    date

    1 October 2009

    • Abstract
    • Full text
    • PDF (498K)

  • title

    The power of SAXS

    journal

    PSI Structural Genomics Knowledgebase

    date

    16 September 2009

    • Abstract
    • Full text

  • title

    Proteomics: Getting the numbers right

    journal

    Nature Reviews Molecular Cell Biology

    date

    1 September 2009

    • Full text
    • PDF (186K)

  • title

    Genome engineering: Breakneck evolution

    journal

    Nature Reviews Genetics

    date

    11 August 2009

    • Full text
    • PDF (122K)

  • title

    Technology: The sequencing game

    journal

    Nature Reviews Genetics

    date

    1 August 2009

    • Full text
    • PDF (132K)

  • title

    Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins

    journal

    Nature Biotechnology

    date

    28 June 2009

    • Abstract
    • Full text
    • PDF (384K)

  • title

    Hybrid selection of discrete genomic intervals on custom-designed microarrays for massively parallel sequencing

    journal

    Nature Protocols

    date

    28 May 2009

    • Abstract
    • Full text
    • PDF (607K)

  • title

    Construction and flow cytometric screening of targeted enzyme libraries

    journal

    Nature Protocols

    date

    21 May 2009

    • Abstract
    • Full text
    • PDF (393K)

  • title

    A sensitive mass spectrometric method for hypothesis-driven detection of peptide post-translational modifications: multiple reaction monitoring-initiated detection and sequencing (MIDAS)

    journal

    Nature Protocols

    date

    14 May 2009

    • Abstract
    • Full text
    • PDF (370K)

  • title

    Using movies to analyse gene circuit dynamics in single cells

    journal

    Nature Reviews Microbiology

    date

    1 May 2009

    • Abstract
    • Full text
    • PDF (884K)

  • title

    A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics

    journal

    Nature Protocols

    date

    16 April 2009

    • Abstract
    • Full text
    • PDF (467K)

  • title

    Enzymatic assembly of DNA molecules up to several hundred kilobases

    journal

    Nature Methods

    date

    12 April 2009

    • Abstract
    • Full text
    • PDF (220K)

  • title

    Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome

    journal

    Nature Protocols

    date

    26 February 2009

    • Abstract
    • Full text
    • PDF (316K)

  • title

    Application of 'next-generation' sequencing technologies to microbial genetics

    journal

    Nature Reviews Microbiology

    date

    23 February 2009

    • Abstract
    • Full text
    • PDF (434K)

• Transcriptomics

  • title

    The transcription unit architecture of the Escherichia coli genome

    journal

    Nature Biotechnology

    date

    1 November 2009

    • Abstract
    • Full text
    • PDF (623K)

  • title

    Computation for ChIP-seq and RNA-seq studies

    journal

    Nature Methods

    date

    15 October 2009

    • Abstract
    • Full text
    • PDF (1,014K)

  • title

    Small RNAs: Microbial metatranscriptomics goes deep

    journal

    Nature Reviews Genetics

    date

    9 June 2009

    • Full text
    • PDF (121K)