Organisms - Bacteria

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• Cancer genomics

  • title

    Reporting data from high-throughput screening of small-molecule libraries

    journal

    Nature Chemical Biology

    date

    1 August 2007

    • Abstract
    • Full text
    • PDF (1,531K)

  • title

    High-throughput screening assays for the identification of chemical probes

    journal

    Nature Chemical Biology

    date

    18 July 2007

    • Abstract
    • Full text
    • PDF (2,440K)

  • title

    Mining and engineering natural-product biosynthetic pathways

    journal

    Nature Chemical Biology

    date

    18 June 2007

    • Abstract
    • Full text
    • PDF (1,329K)

• Chemical genomics

  • title

    Metabolic modeling of a mutualistic microbial community

    journal

    Molecular Systems Biology

    date

    13 March 2007

    • Abstract
    • Full text
    • PDF (413K)

• Comparative, evolutionary and population genomics

  • title

    Functional microarray analysis of nitrogen and carbon cycling genes across an Antarctic latitudinal transect

    journal

    The ISME Journal

    date

    24 May 2007

    • Abstract
    • Full text
    • PDF (274K)

  • title

    GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes

    journal

    The ISME Journal

    date

    1 May 2007

    • Abstract
    • Full text
    • PDF (271K)

  • title

    Use of simulated data sets to evaluate the fidelity of metagenomic processing methods

    journal

    Nature Methods

    date

    29 April 2007

    • Abstract
    • Full text
    • PDF (332K)

  • title

    Metabolic modeling of a mutualistic microbial community

    journal

    Molecular Systems Biology

    date

    13 March 2007

    • Abstract
    • Full text
    • PDF (413K)

  • title

    All in a day's work...

    journal

    Nature Reviews Microbiology

    date

    1 January 2007

    • Full text
    • PDF (473K)

• Genetics of Gene Expression

  • title

    High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons

    journal

    Nature Biotechnology

    date

    1 April 2007

    • Abstract
    • Full text
    • PDF (581K)

• Genome sequence and analysis

  • title

    Complete genome sequence of the myxobacterium Sorangium cellulosum

    journal

    Nature Biotechnology

    date

    28 October 2007

    • Abstract
    • Full text
    • PDF (658K)

  • title

    The importance of culturing bacterioplankton in the 'omics' age

    journal

    Nature Reviews Microbiology

    date

    1 October 2007

    • Abstract
    • Full text
    • PDF (642K)

  • title

    Complete genome sequence of the fish pathogen Flavobacterium psychrophilum

    journal

    Nature Biotechnology

    date

    24 June 2007

    • Abstract
    • Full text
    • PDF (434K)

  • title

    Functional microarray analysis of nitrogen and carbon cycling genes across an Antarctic latitudinal transect

    journal

    The ISME Journal

    date

    24 May 2007

    • Abstract
    • Full text
    • PDF (274K)

  • title

    GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes

    journal

    The ISME Journal

    date

    1 May 2007

    • Abstract
    • Full text
    • PDF (271K)

  • title

    Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus

    journal

    Nature Biotechnology

    date

    29 April 2007

    • Abstract
    • Full text
    • PDF (594K)

  • title

    High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons

    journal

    Nature Biotechnology

    date

    1 April 2007

    • Abstract
    • Full text
    • PDF (581K)

• Metabolomics/nomics

  • title

    A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

    journal

    Molecular Systems Biology

    date

    26 June 2007

    • Abstract
    • Full text
    • PDF (953K)

  • title

    A top-down systems biology view of microbiome-mammalian metabolic interactions in a mouse model

    journal

    Molecular Systems Biology

    date

    22 May 2007

    • Abstract
    • Full text
    • PDF (654K)

  • title

    Metabolic modeling of a mutualistic microbial community

    journal

    Molecular Systems Biology

    date

    13 March 2007

    • Abstract
    • Full text
    • PDF (413K)

• Proteomics

  • title

    A proteome chip approach reveals new DNA damage recognition activities in Escherichia coli

    journal

    Nature Methods

    date

    16 December 2007

    • Abstract
    • Full text
    • PDF (411K)

  • title

    N^pro fusion technology to produce proteins with authentic N termini in E. coli

    journal

    Nature Methods

    date

    18 November 2007

    • Abstract
    • Full text
    • PDF (315K)

  • title

    The protein network of bacterial motility

    journal

    Molecular Systems Biology

    date

    31 July 2007

    • Abstract
    • Full text
    • PDF (608K)

  • title

    Network-based prediction of protein function

    journal

    Molecular Systems Biology

    date

    13 March 2007

    • Abstract
    • Full text
    • PDF (353K)

• Systems biology

  • title

    Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli

    journal

    Molecular Systems Biology

    date

    10 July 2007

    • Abstract
    • Full text
    • PDF (278K)

  • title

    A genome-scale computational study of the interplay between transcriptional regulation and metabolism

    journal

    Molecular Systems Biology

    date

    17 April 2007

    • Abstract
    • Full text
    • PDF (155K)

  • title

    High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons

    journal

    Nature Biotechnology

    date

    1 April 2007

    • Abstract
    • Full text
    • PDF (581K)

  • title

    RNA visualization in live bacterial cells using fluorescent protein complementation

    journal

    Nature Methods

    date

    1 April 2007

    • Abstract
    • Full text
    • PDF (1,645K)

• Techniques and methods

  • title

    High-throughput screening assays for the identification of chemical probes

    journal

    Nature Chemical Biology

    date

    18 July 2007

    • Abstract
    • Full text
    • PDF (2,440K)

  • title

    Functional microarray analysis of nitrogen and carbon cycling genes across an Antarctic latitudinal transect

    journal

    The ISME Journal

    date

    24 May 2007

    • Abstract
    • Full text
    • PDF (274K)

  • title

    GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes

    journal

    The ISME Journal

    date

    1 May 2007

    • Abstract
    • Full text
    • PDF (271K)

  • title

    High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons

    journal

    Nature Biotechnology

    date

    1 April 2007

    • Abstract
    • Full text
    • PDF (581K)

  • title

    How to infer gene networks from expression profiles

    journal

    Molecular Systems Biology

    date

    13 February 2007

    • Abstract
    • Full text
    • PDF (173K)

• Transcriptomics

  • title

    High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons

    journal

    Nature Biotechnology

    date

    1 April 2007

    • Abstract
    • Full text
    • PDF (581K)

  • title

    RNA visualization in live bacterial cells using fluorescent protein complementation

    journal

    Nature Methods

    date

    1 April 2007

    • Abstract
    • Full text
    • PDF (1,645K)

  • title

    How to infer gene networks from expression profiles

    journal

    Molecular Systems Biology

    date

    13 February 2007

    • Abstract
    • Full text
    • PDF (173K)