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Letter
Nature Structural Biology  9, 806 - 811 (2002)
Published online: 15 October 2002; | doi:10.1038/nsb853

Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease I-TevI

Patrick Van Roey1, Lisa Meehan1, Joseph C. Kowalski1, 2, Marlene Belfort1, 2 & Victoria Derbyshire1, 2

1  Wadsworth Center, New York State Department Health, Albany, New York 12201-0509, USA.

2  Department of Biomedical Sciences, School of Public Health, State University of New York at Albany, Albany, New York 12201-0509, USA.

Correspondence should be addressed to Patrick Van Roey vanroey@wadsworth.org
I-TevI, a member of the GIY-YIG family of homing endonucleases, consists of an N-terminal catalytic domain and a C-terminal DNA-binding domain joined by a flexible linker. The GIY-YIG motif is in the N-terminal domain of I-TevI, which corresponds to a phylogenetically widespread catalytic cartridge that is often associated with mobile genetic elements. The crystal structure of the catalytic domain of I-TevI, the first of any GIY-YIG endonuclease, reveals a novel alpha/beta-fold with a central three-stranded antiparallel beta-sheet flanked by three helices. The most conserved and putative catalytic residues are located on a shallow, concave surface and include a metal coordination site. Similarities in the three-dimensional arrangement of the catalytically important residues and the cation-binding site with those of the His-Cys box endonuclease I-PpoI suggest the possibility of mechanistic relationships among these different families of homing endonucleases despite completely different folds.


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Nature Structural & Molecular Biology
ISSN: 1545-9993
EISSN: 1545-9985
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