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TER1, the RNA subunit of fission yeast telomerase

Abstract

Telomerase is the ribonucleoprotein complex that adds telomeric repeats to the ends of chromosomes. Its protein subunit TERT is highly conserved among eukaryotes, whereas the RNA subunit varies greatly in size and sequence, hindering the identification of telomerase RNAs in some important model organisms. Here we report the identification and functional characterization of TER1, the telomerase RNA component from fission yeast Schizosaccharomyces pombe. Deletion of ter1+ caused progressive shortening of telomeres and cellular senescence followed by chromosome circularization. Interactions between Est1 and Trt1, the two known protein components of fission yeast telomerase, were dependent on TER1, supporting its role as a scaffold for the assembly of protein subunits. Using a series of template mutations, we show that translocation or dissociation site variability and template-primer slippage account for the sequence heterogeneity of fission yeast telomeres.

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Figure 1: Isolation of telomerase RNA subunit.
Figure 2: Phenotypes associated with deletion of ter1+.
Figure 3: TER1 biogenesis.
Figure 4: Est1 and Trt1 interact independently with Ter1.
Figure 5: Effect of template mutations on telomere length and sequence.
Figure 6: Primer alignment and repeat heterogeneity.

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References

  1. Collins, K. The biogenesis and regulation of telomerase holoenzymes. Nat. Rev. Mol. Cell Biol. 7, 484–494 (2006).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Cech, T.R. Beginning to understand the end of the chromosome. Cell 116, 273–279 (2004).

    Article  CAS  PubMed  Google Scholar 

  3. Nakamura, T.M. et al. Telomerase catalytic subunit homologs from fission yeast and human. Science 277, 955–959 (1997).

    Article  CAS  PubMed  Google Scholar 

  4. Lingner, J., Cech, T.R., Hughes, T.R. & Lundblad, V. Three Ever Shorter Telomere (EST) genes are dispensable for in vitro yeast telomerase activity. Proc. Natl. Acad. Sci. USA 94, 11190–11195 (1997).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Beernink, H.T., Miller, K., Deshpande, A., Bucher, P. & Cooper, J.P. Telomere maintenance in fission yeast requires an Est1 ortholog. Curr. Biol. 13, 575–580 (2003).

    Article  CAS  PubMed  Google Scholar 

  6. Reichenbach, P. et al. A human homolog of yeast Est1 associates with telomerase and uncaps chromosome ends when overexpressed. Curr. Biol. 13, 568–574 (2003).

    Article  CAS  PubMed  Google Scholar 

  7. Snow, B.E. et al. Functional conservation of the telomerase protein Est1p in humans. Curr. Biol. 13, 698–704 (2003).

    Article  CAS  PubMed  Google Scholar 

  8. Greider, C.W. & Blackburn, E.H. A telomeric sequence in the RNA of Tetrahymena telomerase required for telomere repeat synthesis. Nature 337, 331–337 (1989).

    Article  CAS  PubMed  Google Scholar 

  9. Feng, J. et al. The RNA component of human telomerase. Science 269, 1236–1241 (1995).

    Article  CAS  PubMed  Google Scholar 

  10. Chen, J.L., Blasco, M.A. & Greider, C.W. Secondary structure of vertebrate telomerase RNA. Cell 100, 503–514 (2000).

    Article  CAS  PubMed  Google Scholar 

  11. McEachern, M.J. & Blackburn, E.H. Runaway telomere elongation caused by telomerase RNA gene mutations. Nature 376, 403–409 (1995).

    Article  CAS  PubMed  Google Scholar 

  12. Singer, M.S. & Gottschling, D.E. TLC1: template RNA component of Saccharomyces cerevisiae telomerase. Science 266, 404–409 (1994).

    Article  CAS  PubMed  Google Scholar 

  13. Vulliamy, T. et al. Disease anticipation is associated with progressive telomere shortening in families with dyskeratosis congenita due to mutations in TERC. Nat. Genet. 36, 447–449 (2004).

    Article  CAS  PubMed  Google Scholar 

  14. Cooper, J.P., Nimmo, E.R., Allshire, R.C. & Cech, T.R. Regulation of telomere length and function by a Myb-domain protein in fission yeast. Nature 385, 744–747 (1997).

    Article  CAS  PubMed  Google Scholar 

  15. Kanoh, J. & Ishikawa, F. spRap1 and spRif1, recruited to telomeres by Taz1, are essential for telomere function in fission yeast. Curr. Biol. 11, 1624–1630 (2001).

    Article  CAS  PubMed  Google Scholar 

  16. Baumann, P. & Cech, T.R. Pot1, the putative telomere end-binding protein in fission yeast and humans. Science 292, 1171–1175 (2001).

    Article  CAS  PubMed  Google Scholar 

  17. Hiraoka, Y., Henderson, E. & Blackburn, E.H. Not so peculiar: fission yeast telomere repeats. Trends Biochem. Sci. 23, 126 (1998).

    Article  CAS  PubMed  Google Scholar 

  18. Trujillo, K.M., Bunch, J.T. & Baumann, P. Extended DNA binding site in Pot1 broadens sequence specificity to allow recognition of heterogeneous fission yeast telomeres. J. Biol. Chem. 280, 9119–9128 (2005).

    Article  CAS  PubMed  Google Scholar 

  19. Haering, C.H., Nakamura, T.M., Baumann, P. & Cech, T.R. Analysis of telomerase catalytic subunit mutants in vivo and in vitro in Schizosaccharomyces pombe. Proc. Natl. Acad. Sci. USA 97, 6367–6372 (2000).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  20. Lue, N.F. & Peng, Y. Identification and characterization of a telomerase activity from Schizosaccharomyces pombe. Nucleic Acids Res. 25, 4331–4337 (1997).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  21. Naito, T., Matsuura, A. & Ishikawa, F. Circular chromosome formation in a fission yeast mutant defective in two ATM homologues. Nat. Genet. 20, 203–206 (1998).

    Article  CAS  PubMed  Google Scholar 

  22. Nakamura, T.M., Cooper, J.P. & Cech, T.R. Two modes of survival of fission yeast without telomerase. Science 282, 493–496 (1998).

    Article  CAS  PubMed  Google Scholar 

  23. Nakamura, T.M., Moser, B.A. & Russell, P. Telomere binding of checkpoint sensor and DNA repair proteins contributes to maintenance of functional fission yeast telomeres. Genetics 161, 1437–1452 (2002).

    CAS  PubMed  PubMed Central  Google Scholar 

  24. Dandjinou, A.T. et al. A phylogenetically based secondary structure for the yeast telomerase RNA. Curr. Biol. 14, 1148–1158 (2004).

    Article  CAS  PubMed  Google Scholar 

  25. Seto, A.G., Zaug, A.J., Sobel, S.G., Wolin, S.L. & Cech, T.R. Saccharomyces cerevisiae telomerase is an Sm small nuclear ribonucleoprotein particle. Nature 401, 177–180 (1999).

    Article  CAS  PubMed  Google Scholar 

  26. Jady, B.E., Bertrand, E. & Kiss, T. Human telomerase RNA and box H/ACA scaRNAs share a common Cajal body-specific localization signal. J. Cell Biol. 164, 647–652 (2004).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  27. Lei, M., Podell, E.R., Baumann, P. & Cech, T.R. DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA. Nature 426, 198–203 (2003).

    Article  CAS  PubMed  Google Scholar 

  28. Zappulla, D.C., Goodrich, K. & Cech, T.R. A miniature yeast telomerase RNA functions in vivo and reconstitutes activity in vitro. Nat. Struct. Mol. Biol. 12, 1072–1077 (2005).

    Article  CAS  PubMed  Google Scholar 

  29. Zappulla, D.C. & Cech, T.R. Yeast telomerase RNA: a flexible scaffold for protein subunits. Proc. Natl. Acad. Sci. USA 101, 10024–10029 (2004).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  30. Livengood, A.J., Zaug, A.J. & Cech, T.R. Essential regions of Saccharomyces cerevisiae telomerase RNA: separate elements for Est1p and Est2p interaction. Mol. Cell. Biol. 22, 2366–2374 (2002).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  31. Chapon, C., Cech, T.R. & Zaug, A.J. Polyadenylation of telomerase RNA in budding yeast. RNA 3, 1337–1351 (1997).

    CAS  PubMed  PubMed Central  Google Scholar 

  32. Mitchell, J.R., Cheng, J. & Collins, K. A box H/ACA small nucleolar RNA-like domain at the human telomerase RNA 3′ end. Mol. Cell. Biol. 19, 567–576 (1999).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  33. Fu, D. & Collins, K. Human telomerase and Cajal body ribonucleoproteins share a unique specificity of Sm protein association. Genes Dev. 20, 531–536 (2006).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  34. Forstemann, K. & Lingner, J. Molecular basis for telomere repeat divergence in budding yeast. Mol. Cell. Biol. 21, 7277–7286 (2001).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  35. Baumann, P. & Cech, T.R. Protection of telomeres by the Ku protein in fission yeast. Mol. Biol. Cell 11, 3265–3275 (2000).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  36. Brun, C., Dubey, D.D. & Huberman, J.A. pDblet, a stable autonomously replicating shuttle vector for Schizosaccharomyces pombe. Gene 164, 173–177 (1995).

    Article  CAS  PubMed  Google Scholar 

  37. Church, G.M. & Gilbert, W. Genomic sequencing. Proc. Natl. Acad. Sci. USA 81, 1991–1995 (1984).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  38. Li, S.G., Zhou, H., Luo, Y.P., Zhang, P. & Qu, L.H. Identification and functional analysis of 20 Box H/ACA small nucleolar RNAs (snoRNAs) from Schizosaccharomyces pombe. J. Biol. Chem. 280, 16446–16455 (2005).

    Article  CAS  PubMed  Google Scholar 

  39. Zaug, A.J., Linger, J. & Cech, T.R. Method for determining RNA 3′ ends and application to human telomerase RNA. Nucleic Acids Res. 24, 532–533 (1996).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  40. Bunch, J.T., Bae, N.S., Leonardi, J. & Baumann, P. Distinct requirements for Pot1 in limiting telomere length and maintaining chromosome stability. Mol. Cell. Biol. 25, 5567–5578 (2005).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

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Acknowledgements

We thank X. Wang for her help and advice, G. Zakian and C. Webb for their willingness to coordinate publication of similar, independently obtained results, J. Huberman (Roswell Park Cancer Institute) for plasmid pDblet, M. Cook and E. Glynn for computational help, D. Baumann, C. Haering, X. Wang and D. Zapulla for critical reading of the manuscript and the Stowers Institute Molecular Biology Facility staff for site-directed mutagenesis and sequencing. We also thank T. Cech, M. Blanchette and D. Zapulla for discussions. Work in our laboratory is supported by the Stowers Institute for Medical Research, a Basil O'Connor Starter Scholar Research Award to P.B. (5-FY03-134) and the Pew Scholars Program in Biomedical Sciences.

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J.L. isolated and cloned the RNA subunit and performed immunoprecipitation and telomerase assays; J.A.B. contributed DNA constructs, fission yeast strains and telomere length analyses; J.T.B. generated northern blots and telomere sequence data; and P.B. designed the experiments and contributed RACE data, telomerase assays and pulsed-field gel electrophoresis analysis.

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Correspondence to Peter Baumann.

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Leonardi, J., Box, J., Bunch, J. et al. TER1, the RNA subunit of fission yeast telomerase. Nat Struct Mol Biol 15, 26–33 (2008). https://doi.org/10.1038/nsmb1343

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