Table of contents
July 2009 Vol 7 No 7
In this issue
p477 | doi:10.1038/nrmicro2179
Editorial: Safety from farm to fork
p478 | doi:10.1038/nrmicro2181
Research Highlights
Bacterial pathogenesis: Taking iron from the fire | PDF (224 KB)
p479 | doi:10.1038/nrmicro2172
Parasitology: PADding up for differentiation | PDF (152 KB)
p480 | doi:10.1038/nrmicro2168
Antiviral immunity: TRIMming the response | PDF (182 KB)
p480 | doi:10.1038/nrmicro2170
Phage biology: Uncorking the phage capsid | PDF (145 KB)
p480 | doi:10.1038/nrmicro2180
In brief
Environmental microbiology | Microbial ecology | Fungal genomics | PDF (136 KB)
p481 | doi:10.1038/nrmicro2177
Bacterial pathogenesis: Disruptive influence | PDF (140 KB)
p482 | doi:10.1038/nrmicro2173
Bacterial physiology: Release the vesicles | PDF (103 KB)
p482 | doi:10.1038/nrmicro2178
News and Analysis
Genome watch
Milk and two oligosaccharides | PDF (267 KB)
p483 | doi:10.1038/nrmicro2169
Disease watch
In the News | PDF (164 KB)
p484 | doi:10.1038/nrmicro2175
Progress
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis
K. Heran Darwin
p485 | doi:10.1038/nrmicro2148
Tagging eukaryotic proteins with ubiquitin can target them for proteasomal degradation. However, despite the presence of proteasomes in several bacterial and all archaeal species, prokaryotic homologues of ubiquitin were presumed to be absent. In this Progress article, Heran Darwin describes the characterization of a prokaryotic ubiquitin-like protein (Pup) that is covalently attached to proteins, resulting in their proteasome-mediated degradation.
Reviews
Common strategies for antigenic variation by bacterial, fungal and protozoan pathogens
Kirk W. Deitsch, Sheila A. Lukehart & James R. Stringer
p493 | doi:10.1038/nrmicro2145
To evade immune responses in mammalian hosts, many pathogens use complex genetic systems to vary the surface antigens that are recognized by host defences. In this Review, Kirk Deitsch and colleagues highlight how bacterial, protozoan and fungal pathogens from distinct evolutionary lineages have evolved surprisingly similar mechanisms for antigenic variation.
Epigenetic regulation in African trypanosomes: a new kid on the block
Luisa M. Figueiredo, George A. M. Cross & Christian J. Janzen
p504 | doi:10.1038/nrmicro2149
The identification of post-translational histone modifications and chromatin-modifying enzymes in eukaryotic parasites has widened the field of research into epigenetic regulation. Figueiredo, Cross and Janzen compare the role of epigenetics in Trypanosoma brucei and humans and discuss how studies in such parasites might yield useful information about the evolution of epigenetic processes.
The versatility and adaptation of bacteria from the genus Stenotrophomonas
Robert P. Ryan, Sebastien Monchy, Massimiliano Cardinale, Safiyh Taghavi, Lisa Crossman, Matthew B. Avison, Gabriele Berg, Daniel van der Lelie & J. Maxwell Dow
p514 | doi:10.1038/nrmicro2163
Bacteria from the genus Stenotrophomonas are found in a wide range of different environments. Here, Ryan et al. compare the recently sequenced genomes of two different Stenotrophomonas species to highlight the possible genetic basis of adaptation to these different niches.
Clostridium difficile infection: new developments in epidemiology and pathogenesis
Maja Rupnik, Mark H. Wilcox & Dale N. Gerding
p526 | doi:10.1038/nrmicro2164
Since 2001, the prevalence and severity of Clostridium difficile infection have increased substantially, and C. difficile is now considered to be one of the most important causes of health care-associated infections. Here, Rupnik, Wilcox and Gerding discuss the recent epidemiological changes in C. difficile infection and our current knowledge of C. difficile virulence factors.
Perspectives
Opinion
Myths and misconceptions: the origin and evolution of Mycobacterium tuberculosis
Noel H. Smith, R. Glyn Hewinson, Kristin Kremer, Roland Brosch & Stephen V. Gordon
p537 | doi:10.1038/nrmicro2165
The evolution and molecular characteristics of the Mycobacterium tuberculosis complex are hotly debated. Here, Noel Smith and colleagues address several misconceptions about the origins of tuberculosis that have arisen over the years.


