Table of contents


cover image
Top

Protocols



Transcription factor binding predictions using TRAP for the analysis of ChIP-seq data and regulatory SNPs pp1860 - 1869

Morgane Thomas-Chollier, Andrew Hufton, Matthias Heinig, Sean O'Keeffe, Nassim El Masri, Helge G Roider, Thomas Manke & Martin Vingron

doi:10.1038/nprot.2011.409

Subject terms: Genomics | Computational biology


Multiplexed array-based and in-solution genomic enrichment for flexible and cost-effective targeted next-generation sequencing pp1870 - 1886

Magdalena Harakalova, Michal Mokry, Barbara Hrdlickova, Ivo Renkens, Karen Duran, Henk van Roekel, Nico Lansu, Mark van Roosmalen, Ewart de Bruijn, Isaac J Nijman, Wigard P Kloosterman & Edwin Cuppen

doi:10.1038/nprot.2011.396

Subject terms: Genomics | Isolation, purification and separation | Isolation, purification and separation | Nucleic acid based molecular biology


Imaging of rat optic nerve axons in vivo pp1887 - 1896

Jan C Koch, Johanna Knöferle, Lars Tönges, Uwe Michel, Mathias Bähr & Paul Lingor

doi:10.1038/nprot.2011.403

Subject terms: Cell biology | Imaging | Model organisms | Neuroscience




Generating human intestinal tissue from pluripotent stem cells in vitro pp1920 - 1928

Kyle W McCracken, Jonathan C Howell, James M Wells & Jason R Spence

doi:10.1038/nprot.2011.410

Subject terms: Cell culture | Model organisms | Tissue culture



Vertebrate neural stem cell segmentation, tracking and lineaging with validation and editing pp1942 - 1952

Mark Winter, Eric Wait, Badrinath Roysam, Susan K Goderie, Rania Ahmed Naguib Ali, Erzsebet Kokovay, Sally Temple & Andrew R Cohen

doi:10.1038/nprot.2011.422

Subject terms: Neuroscience | Imaging | Computational biology


Determining the number of specific proteins in cellular compartments by quantitative microscopy pp1953 - 1968

Sarah A Mutch, Jennifer C Gadd, Bryant S Fujimoto, Patricia Kensel-Hammes, Perry G Schiro, Sandra M Bajjalieh & Daniel T Chiu

doi:10.1038/nprot.2011.414

Subject terms: Proteomics | Imaging



Prospective isolation of adult neural stem cells from the mouse subependymal zone pp1981 - 1989

Judith Fischer, Ruth Beckervordersandforth, Pratibha Tripathi, Andrea Steiner-Mezzadri, Jovica Ninkovic & Magdalena Götz

doi:10.1038/nprot.2011.412

Subject terms: Cell biology | Cell culture | Isolation, purification and separation | Model organisms | Neuroscience




Design and self-assembly of siRNA-functionalized RNA nanoparticles for use in automated nanomedicine pp2022 - 2034

Kirill A Afonin, Wade W Grabow, Faye M Walker, Eckart Bindewald, Marina A Dobrovolskaia, Bruce A Shapiro & Luc Jaeger

doi:10.1038/nprot.2011.418

Subject terms: Nanotechnology | Nucleic acid based molecular biology




Top

Extra navigation

Subscribe to Nature Protocols

Subscribe

natureevents

ADVERTISEMENT