Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site-specific stable isotope tagging
In-gel digestion for mass spectrometric characterization of proteins and proteomes
Andrej Shevchenko, Henrik Tomas, Jan Havlis, Jesper V Olsen & Matthias Mann Nature Protocols1, 2856-2860 (2007) Abstract|Full text|PDF
A practical recipe for stable isotope labeling by amino acids in cell culture (SILAC)
Shao-En Ong & Matthias Mann Nature Protocols1, 2650-2660 (2007) Abstract|Full text|PDF
Tandem orthogonal proteolysis-activity-based protein profiling (TOP-ABPP)—a general method for mapping sites of probe modification in proteomes
Eranthie Weerapana, Anna E Speers & Benjamin F Cravatt Nature Protocols2, 1414-1425 (2007) Abstract|Full text|PDF
Labeling, detection and identification of newly synthesized proteomes with bioorthogonal non-canonical amino-acid tagging
Daniela C Dieterich, Jennifer J Lee, A James Link, Johannes Graumann, David A Tirrell & Erin M Schuman Nature Protocols2, 532-540 (2007) Abstract|Full text|PDF
Unrestrictive identification of post-translational modifications through peptide mass spectrometry
Stephen Tanner, Pavel A Pevzner & Vineet Bafna Nature Protocols1, 67-72 (2006) Abstract|Full text|PDF
In-gel stable isotope labeling for relative quantification using mass spectrometry
John M Asara, Xiang Zhang, Bin Zheng, Lisa A Maroney, Heather R Christofk, Ning Wu & Lewis C Cantley Nature Protocols1, 46-51 (2006) Abstract|Full text|PDF
Liquid-based free-flow electrophoresis-reversed-phase HPLC: a proteomic tool
Robert L Moritz & Richard J Simpson Nature Methods2, 863-873 (2005) Full text|PDF