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A sensitive and high-throughput assay to detect low-abundance proteins in serum

Abstract

The ability to detect antigens immunologically is limited by the affinity of the antibodies and the amount of antigens. We have now succeeded in creating a modular, facile amplification system, termed fluorescent amplification catalyzed by T7 polymerase technique (FACTT). Such a system can detect protein targets specifically at subfemtomolar levels (0.08 fM). We describe here the detection of Her2 (also known as Neu) from rodent and human sera. FACTT is adaptable to high-throughput screening and automation and provides a practical method to enhance current ELISAs in medical practice.

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Figure 1: Illustration of FACTT.
Figure 2: Detection of streptavidin.
Figure 3: Detection of Her2.
Figure 4: Detection of serum Her2 in tumor-bearing mice.
Figure 5: Detection of Her2 from human sera.

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References

  1. Porstmann, T. & Kiessig, S.T. Enzyme immunoassay techniques. An overview. J. Immunol. Methods 150, 5–21 (1992).

    Article  CAS  Google Scholar 

  2. Porstmann, B., Porstmann, T., Nugel, E. & Evers, U. Which of the commonly used marker enzymes gives the best results in colorimetric and fluorimetric enzyme immunoassays: horseradish peroxidase, alkaline phosphatase or beta-galactosidase? J. Immunol. Methods 79, 27–37 (1985).

    Article  CAS  Google Scholar 

  3. Zhang, H.T., Kacharmina, J.E., Miyashiro, K., Greene, M.I. & Eberwine, J. Protein quantification from complex protein mixtures using a proteomics methodology with single-cell resolution. Proc. Natl. Acad. Sci. USA 98, 5497–5502 (2001).

    Article  CAS  Google Scholar 

  4. Jones, L.J., Yue, S.T., Cheung, C.Y. & Singer, V.L. RNA quantitation by fluorescence-based solution assay: RiboGreen reagent characterization. Anal. Biochem. 265, 368–374 (1998).

    Article  CAS  Google Scholar 

  5. Slamon, D.J. et al. Studies of the HER-2/neu proto-oncogene in human breast and ovarian cancer. Science 244, 707–712 (1989).

    Article  CAS  Google Scholar 

  6. Cohen, J.A. et al. Expression pattern of the neu (NGL) gene-encoded growth factor receptor protein (p185neu) in normal and transformed epithelial tissues of the digestive tract. Oncogene 4, 81–88 (1989).

    CAS  PubMed  Google Scholar 

  7. Lodato, R.F., Maguire, H.C., Jr., Greene, M.I., Weiner, D.B. & LiVolsi, V.A. Immunohistochemical evaluation of c-erbB-2 oncogene expression in ductal carcinoma in situ and atypical ductal hyperplasia of the breast. Mod. Pathol. 3, 449–454 (1990).

    CAS  PubMed  Google Scholar 

  8. Maguire, H.C., Jr. & Greene, M.I. Neu (c-erbB-2), a tumor marker in carcinoma of the female breast. Pathobiology 58, 297–303 (1990).

    Article  Google Scholar 

  9. Williams, T.M., Weiner, D.B., Greene, M.I. & Maguire, H.C., Jr. Expression of c-erbB-2 in human pancreatic adenocarcinomas. Pathobiology 59, 46–52 (1991).

    Article  CAS  Google Scholar 

  10. Jardines, L., Weiss, M., Fowble, B. & Greene, M. neu(c-erbB-2/HER2) and the epidermal growth factor receptor (EGFR) in breast cancer. Pathobiology 61, 268–282 (1993).

    Article  CAS  Google Scholar 

  11. Kandl, H., Seymour, L. & Bezwoda, W.R. Soluble c-erbB-2 fragment in serum correlates with disease stage and predicts for shortened survival in patients with early-stage and advanced breast cancer. Br. J. Cancer 70, 739–742 (1994).

    Article  CAS  Google Scholar 

  12. Fehm, T., Maimonis, P., Katalinic, A. & Jager, W.H. The prognostic significance of c-erbB-2 serum protein in metastatic breast cancer. Oncology 55, 33–38 (1998).

    Article  CAS  Google Scholar 

  13. Yamauchi, H. et al. Prediction of response to antiestrogen therapy in advanced breast cancer patients by pretreatment circulating levels of extracellular domain of the HER-2/c-neu protein. J. Clin. Oncol. 15, 2518–2525 (1997).

    Article  CAS  Google Scholar 

  14. Park, B.W. et al. Rationally designed anti-HER2/neu peptide mimetic disables P185HER2/neu tyrosine kinases in vitro and in vivo. Nat. Biotechnol. 18, 194–198 (2000).

    Article  CAS  Google Scholar 

  15. Di Leo, A., Dowsett, M., Horten, B. & Penault-Llorca, F. Current status of HER2 testing. Oncology 63, 25–32 (2002).

    Article  CAS  Google Scholar 

  16. Vogel, C.L. et al. Efficacy and safety of trastuzumab as a single agent in first-line treatment of HER2-overexpressing metastatic breast cancer. J. Clin. Oncol. 20, 719–726 (2002).

    Article  CAS  Google Scholar 

  17. Saghatchian, M. et al. Serum HER-2 extracellular domain: Relationship with clinicobiological presentation and prognostic value before and after primary treatment in 701 breast cancer patients. Int. J. Biol. Markers 19, 14–22 (2004).

    Article  CAS  Google Scholar 

  18. Luftner, D. et al. Discordant results obtained for different methods of HER-2/neu testing in breast cancer — a question of standardization, automation and timing. Int. J. Biol. Markers 19, 1–13 (2004).

    Article  CAS  Google Scholar 

  19. Schweitzer, B. et al. Inaugural article: immunoassays with rolling circle DNA amplification: a versatile platform for ultrasensitive antigen detection. Proc. Natl. Acad. Sci. USA 97, 10113–10119 (2000).

    Article  CAS  Google Scholar 

  20. Schweitzer, B. et al. Multiplexed protein profiling on microarrays by rolling-circle amplification. Nat. Biotechnol. 20, 359–365 (2002).

    Article  CAS  Google Scholar 

  21. Tannous, B.A., Laios, E. & Christopoulos, T.K. T7 RNA polymerase as a self-replicating label for antigen quantification. Nucleic Acids Res. 30, e140 (2002).

    Article  Google Scholar 

  22. Arnold, S. et al. Kinetic modeling and simulation of in vitro transcription by phage T7 RNA polymerase. Biotechnol. Bioeng. 72, 548–561 (2001).

    Article  CAS  Google Scholar 

  23. Nam, J.M., Thaxton, C.S. & Mirkin, C.A. Nanoparticle-based bio-bar codes for the ultrasensitive detection of proteins. Science 301, 1884–1886 (2003).

    Article  CAS  Google Scholar 

  24. Lubec, G., Krapfenbauer, K. & Fountoulakis, M. Proteomics in brain research: potentials and limitations. Prog. Neurobiol. 69, 193–211 (2003).

    Article  CAS  Google Scholar 

  25. Li, P., Li, Y., Li, J.Y. & Liu, J. Characterization and utilization of two novel anti-erbB-2 monoclonal antibodies in detection of soluble ErbB-2 for breast cancer prognosis. Cancer Lett. 193, 139–148 (2003).

    Article  CAS  Google Scholar 

  26. Zhang, H. et al. Shared antigenic epitopes and pathobiological functions of anti-p185(her2/neu) monoclonal antibodies. Exp. Mol. Pathol. 67, 15–25 (1999).

    Article  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by grants from the Abramson Family Cancer Research Institute to M.I.G. We thank X. (G.) Xu for the control sera from healthy volunteers and A. Massey for the preparation of the illustration for FACTT in Figure 1.

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Correspondence to Mark I Greene.

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The authors declare no competing financial interests.

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Zhang, H., Cheng, X., Richter, M. et al. A sensitive and high-throughput assay to detect low-abundance proteins in serum. Nat Med 12, 473–477 (2006). https://doi.org/10.1038/nm1378

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