Table of contents
November 2009, Volume 41 No 11 pp1157-1257
About the coverEditorial
Data divorce - p1157
doi:10.1038/ng1109-1157
Abstract - Data divorce | Full Text - Data divorce | PDF (88 KB) - Data divorce
Obituary
Richard S. Spielman 1946–2009 - p1159
Jurg Ott
doi:10.1038/ng1109-1159
Full Text - Richard S. Spielman 1946–2009 | PDF (91 KB) - Richard S. Spielman 1946–2009
News and Views
Genes determining blood cell traits - pp1161 - 1162
Nancy C Andrews
doi:10.1038/ng1109-1161
Full Text - Genes determining blood cell traits | PDF (238 KB) - Genes determining blood cell traits
See also: Brief Communication by Chambers et al. | Brief Communication by Benyamin et al. | Article by Soranzo et al. | Article by Ganesh et al.
Not so lost in the genetic crowd - pp1163 - 1164
Nicholas J Schork & Vikas Bansal
doi:10.1038/ng1109-1163
Full Text - Not so lost in the genetic crowd | PDF (2,456 KB) - Not so lost in the genetic crowd
See also: Letter by Jacobs et al.
DNA methylation is a guardian of stem cell self-renewal and multipotency - pp1164 - 1166
Laurraine-Marcelle Gereige & Hanna K A Mikkola
doi:10.1038/ng1109-1164
Full Text - DNA methylation is a guardian of stem cell self-renewal and multipotency | PDF (974 KB) - DNA methylation is a guardian of stem cell self-renewal and multipotency
See also: Article by Bröske et al.
Research Highlights
Research highlights - p1167
doi:10.1038/ng1109-1167
Full Text - Research highlights | PDF (119 KB) - Research highlights
Brief Communications
Genome-wide association study identifies variants in TMPRSS6 associated with hemoglobin levels - pp1170 - 1172
John C Chambers, Weihua Zhang, Yun Li, Joban Sehmi, Mark N Wass, Delilah Zabaneh, Clive Hoggart, Henry Bayele, Mark I McCarthy, Leena Peltonen, Nelson B Freimer, Surjit K Srai, Patrick H Maxwell, Michael J E Sternberg, Aimo Ruokonen, Gonçalo Abecasis, Marjo-Riitta Jarvelin, James Scott, Paul Elliott & Jaspal S Kooner
doi:10.1038/ng.462
John Chambers and colleagues report the association of SNPs in TMPRSS6, which encodes a regulator of hepicidin synthesis, to hemoglobin levels.
Abstract - Genome-wide association study identifies variants in : TMPRSS6: associated with hemoglobin levels | Full Text - Genome-wide association study identifies variants in TMPRSS6 associated with hemoglobin levels | PDF (301 KB) - Genome-wide association study identifies variants in TMPRSS6 associated with hemoglobin levels | Supplementary information
See also: News and Views by Andrews | Brief Communication by Benyamin et al. | Article by Soranzo et al. | Article by Ganesh et al.
Common variants in TMPRSS6 are associated with iron status and erythrocyte volume - pp1173 - 1175
Beben Benyamin, Manuel A R Ferreira, Gonneke Willemsen, Scott Gordon, Rita P S Middelberg, Brian P McEvoy, Jouke-Jan Hottenga, Anjali K Henders, Megan J Campbell, Leanne Wallace, Ian H Frazer, Andrew C Heath, Eco J C de Geus, Dale R Nyholt, Peter M Visscher, Brenda W Penninx, Dorret I Boomsma, Nicholas G Martin, Grant W Montgomery & John B Whitfield
doi:10.1038/ng.456
Beben Benyamin and colleagues report a genome-wide association study to iron status, identifying variants in TMPRSS6 associated with serum iron, transferrin saturation and erythrocyte volume.
Abstract - Common variants in : TMPRSS6: are associated with iron status and erythrocyte volume | Full Text - Common variants in TMPRSS6 are associated with iron status and erythrocyte volume | PDF (298 KB) - Common variants in TMPRSS6 are associated with iron status and erythrocyte volume | Supplementary information
See also: News and Views by Andrews | Brief Communication by Chambers et al. | Article by Soranzo et al. | Article by Ganesh et al.
T (brachyury) gene duplication confers major susceptibility to familial chordoma - pp1176 - 1178
Xiaohong R Yang, David Ng, David A Alcorta, Norbert J Liebsch, Eamonn Sheridan, Sufeng Li, Alisa M Goldstein, Dilys M Parry & Michael J Kelley
doi:10.1038/ng.454
Dilys Parry and colleagues show that duplications of the T gene confer susceptibility to familial chordoma, a cancer of presumed notochordal origin. The T gene product, known as brachyury, is a transcription factor that plays an important role in notochord development.
Abstract - T: (brachyury) gene duplication confers major susceptibility to familial chordoma | Full Text - T (brachyury) gene duplication confers major susceptibility to familial chordoma | PDF (453 KB) - T (brachyury) gene duplication confers major susceptibility to familial chordoma | Supplementary information
Mutations in FAM134B, encoding a newly identified Golgi protein, cause severe sensory and autonomic neuropathy - pp1179 - 1181
Ingo Kurth, Torsten Pamminger, J Christopher Hennings, Désirée Soehendra, Antje K Huebner, Annelies Rotthier, Jonathan Baets, Jan Senderek, Haluk Topaloglu, Sandra A Farrell, Gudrun Nürnberg, Peter Nürnberg, Peter De Jonghe, Andreas Gal, Christoph Kaether, Vincent Timmerman & Christian A Hübner
doi:10.1038/ng.464
Ingo Kurth and Christian Hübner report the identification of loss-of-function mutations in FAM134B, which encodes a novel cis-Golgi protein, in hereditary sensory and autonomic neuropathy type II.
Abstract - Mutations in : FAM134B: , encoding a newly identified Golgi protein, cause severe sensory and autonomic neuropathy | Full Text - Mutations in FAM134B, encoding a newly identified Golgi protein, cause severe sensory and autonomic neuropathy | PDF (524 KB) - Mutations in FAM134B, encoding a newly identified Golgi protein, cause severe sensory and autonomic neuropathy | Supplementary information
Articles
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium - pp1182 - 1190
Nicole Soranzo, Tim D Spector, Massimo Mangino, Brigitte Kühnel, Augusto Rendon, Alexander Teumer, Christina Willenborg, Benjamin Wright, Li Chen, Mingyao Li, Perttu Salo, Benjamin F Voight, Philippa Burns, Roman A Laskowski, Yali Xue, Stephan Menzel, David Altshuler, John R Bradley, Suzannah Bumpstead, Mary-Susan Burnett, Joseph Devaney, Angela Döring, Roberto Elosua, Stephen E Epstein, Wendy Erber, Mario Falchi, Stephen F Garner, Mohammed J R Ghori, Alison H Goodall, Rhian Gwilliam, Hakon H Hakonarson, Alistair S Hall, Naomi Hammond, Christian Hengstenberg, Thomas Illig, Inke R König, Christopher W Knouff, Ruth McPherson, Olle Melander, Vincent Mooser, Matthias Nauck, Markku S Nieminen, Christopher J O'Donnell, Leena Peltonen, Simon C Potter, Holger Prokisch, Daniel J Rader, Catherine M Rice, Robert Roberts, Veikko Salomaa, Jennifer Sambrook, Stefan Schreiber, Heribert Schunkert, Stephen M Schwartz, Jovana Serbanovic-Canic, Juha Sinisalo, David S Siscovick, Klaus Stark, Ida Surakka, Jonathan Stephens, John R Thompson, Uwe Völker, Henry Völzke, Nicholas A Watkins, George A Wells, H-Erich Wichmann, David A Van Heel, Chris Tyler-Smith, Swee Lay Thein, Sekar Kathiresan, Markus Perola, Muredach P Reilly, Alexandre F R Stewart, Jeanette Erdmann, Nilesh J Samani, Christa Meisinger, Andreas Greinacher, Panos Deloukas, Willem H Ouwehand & Christian Gieger
doi:10.1038/ng.467
Nicole Soranzo and colleagues report a meta-analysis of genome-wide association datasets identifying 22 associations to 8 clinically relevant hematological traits. They also identify a long-range haplotype at 12q24 that includes variants associated with platelet counts as well as coronary artery disease and shows evidence of a selective sweep in Europeans.
Abstract - A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium | Full Text - A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium | PDF (834 KB) - A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium | Supplementary information
See also: News and Views by Andrews | Brief Communication by Chambers et al. | Brief Communication by Benyamin et al. | Article by Ganesh et al.
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium - pp1191 - 1198
Santhi K Ganesh, Neil A Zakai, Frank J A van Rooij, Nicole Soranzo, Albert V Smith, Michael A Nalls, Ming-Huei Chen, Anna Kottgen, Nicole L Glazer, Abbas Dehghan, Brigitte Kuhnel, Thor Aspelund, Qiong Yang, Toshiko Tanaka, Andrew Jaffe, Joshua C M Bis, Germaine C Verwoert, Alexander Teumer, Caroline S Fox, Jack M Guralnik, Georg B Ehret, Kenneth Rice, Janine F Felix, Augusto Rendon, Gudny Eiriksdottir, Daniel Levy, Kushang V Patel, Eric Boerwinkle, Jerome I Rotter, Albert Hofman, Jennifer G Sambrook, Dena G Hernandez, Gang Zheng, Stefania Bandinelli, Andrew B Singleton, Josef Coresh, Thomas Lumley, André G Uitterlinden, Janine M vanGils, Lenore J Launer, L Adrienne Cupples, Ben A Oostra, Jaap-Jan Zwaginga, Willem H Ouwehand, Swee-Lay Thein, Christa Meisinger, Panos Deloukas, Matthias Nauck, Tim D Spector, Christian Gieger, Vilmundur Gudnason, Cornelia M van Duijn, Bruce M Psaty, Luigi Ferrucci, Aravinda Chakravarti, Andreas Greinacher, Christopher J O'Donnell, Jacqueline C M Witteman, Susan Furth, Mary Cushman, Tamara B Harris & Jing-Ping Lin
doi:10.1038/ng.466
Santhi Ganesh and colleagues report meta-analyses of genome-wide association studies of six erythrocyte traits within the CHARGE consortium, with replication in cohorts of the HaemGen consortium. They report 23 loci associated with a range of clinically relevant red blood cell traits.
First Paragraph - Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium | Full Text - Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium | PDF (817 KB) - Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium | Supplementary information
See also: News and Views by Andrews | Brief Communication by Chambers et al. | Brief Communication by Benyamin et al. | Article by Soranzo et al.
Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies - pp1199 - 1206
Fernando Rivadeneira, Unnur Styrkársdottir, Karol Estrada, Bjarni V Halldórsson, Yi-Hsiang Hsu, J Brent Richards, M Carola Zillikens, Fotini K Kavvoura, Najaf Amin, Yurii S Aulchenko, L Adrienne Cupples, Panagiotis Deloukas, Serkalem Demissie, Elin Grundberg, Albert Hofman, Augustine Kong, David Karasik, Joyce B van Meurs, Ben Oostra, Tomi Pastinen, Huibert A P Pols, Gunnar Sigurdsson, Nicole Soranzo, Gudmar Thorleifsson, Unnur Thorsteinsdottir, Frances M K Williams, Scott G Wilson, Yanhua Zhou, Stuart H Ralston, Cornelia M van Duijn, Timothy Spector, Douglas P Kiel, Kari Stefansson, John P A Ioannidis & André G Uitterlinden for the Genetic Factors for Osteoporosis (GEFOS) Consortium
doi:10.1038/ng.446
Fernando Rivadeneira and colleagues report findings from a large-scale meta-analysis of genome-wide association studies for bone mineral density. The loci identified in this study map to genes in signaling pathways relevant to bone metabolism and highlight the complex genetic architecture underlying osteoporosis.
Abstract - Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies | Full Text - Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies | PDF (723 KB) - Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies | Supplementary information
DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction - pp1207 - 1215
Ann-Marie Bröske, Lena Vockentanz, Shabnam Kharazi, Matthew R Huska, Elena Mancini, Marina Scheller, Christiane Kuhl, Andreas Enns, Marco Prinz, Rudolf Jaenisch, Claus Nerlov, Achim Leutz, Miguel A Andrade-Navarro, Sten Eirik W Jacobsen & Frank Rosenbauer
doi:10.1038/ng.463
Frank Rosenbauer and colleagues show that alternative functional programs of hematopoietic stem cells are governed by gradual differences in the cellular DNA methylation level.
Abstract - DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction | Full Text - DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction | PDF (1,161 KB) - DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction | Supplementary information
See also: News and Views by Gereige & Mikkola
Global patterns of cis variation in human cells revealed by high-density allelic expression analysis - pp1216 - 1222
Bing Ge, Dmitry K Pokholok, Tony Kwan, Elin Grundberg, Lisanne Morcos, Dominique J Verlaan, Jennie Le, Vonda Koka, Kevin C L Lam, Vincent Gagné, Joana Dias, Rose Hoberman, Alexandre Montpetit, Marie-Michele Joly, Edward J Harvey, Daniel Sinnett, Patrick Beaulieu, Robert Hamon, Alexandru Graziani, Ken Dewar, Eef Harmsen, Jacek Majewski, Harald H H Göring, Anna K Naumova, Mathieu Blanchette, Kevin L Gunderson & Tomi Pastinen
doi:10.1038/ng.473
Tomi Pastinen and colleagues report a genome-wide analysis of allelic expression variation in lymphoblastoid cell lines from HapMap individuals.
Abstract - Global patterns of : cis: variation in human cells revealed by high-density allelic expression analysis | Full Text - Global patterns of cis variation in human cells revealed by high-density allelic expression analysis | PDF (649 KB) - Global patterns of cis variation in human cells revealed by high-density allelic expression analysis | Supplementary information
Letters
Microduplications of 16p11.2 are associated with schizophrenia - pp1223 - 1227
Shane E McCarthy, Vladimir Makarov, George Kirov, Anjene M Addington, Jon McClellan, Seungtai Yoon, Diana O Perkins, Diane E Dickel, Mary Kusenda, Olga Krastoshevsky, Verena Krause, Ravinesh A Kumar, Detelina Grozeva, Dheeraj Malhotra, Tom Walsh, Elaine H Zackai, Paige Kaplan, Jaya Ganesh, Ian D Krantz, Nancy B Spinner, Patricia Roccanova, Abhishek Bhandari, Kevin Pavon, B Lakshmi, Anthony Leotta, Jude Kendall, Yoon-ha Lee, Vladimir Vacic, Sydney Gary, Lilia M Iakoucheva, Timothy J Crow, Susan L Christian, Jeffrey A Lieberman, T Scott Stroup, Terho Lehtimäki, Kaija Puura, Chad Haldeman-Englert, Justin Pearl, Meredith Goodell, Virginia L Willour, Pamela DeRosse, Jo Steele, Layla Kassem, Jessica Wolff, Nisha Chitkara, Francis J McMahon, Anil K Malhotra, James B Potash, Thomas G Schulze, Markus M Nöthen, Sven Cichon, Marcella Rietschel, Ellen Leibenluft, Vlad Kustanovich, Clara M Lajonchere, James S Sutcliffe, David Skuse, Michael Gill, Louise Gallagher, Nancy R Mendell, Wellcome Trust Case Control Consortium, Nick Craddock, Michael J Owen, Michael C O'Donovan, Tamim H Shaikh, Ezra Susser, Lynn E DeLisi, Patrick F Sullivan, Curtis K Deutsch, Judith Rapoport, Deborah L Levy, Mary-Claire King & Jonathan Sebat
doi:10.1038/ng.474
Jonathan Sebat and colleagues report the association of microduplication on chromosome 16p11.2 with schizophrenia, while the reciprocal microdeletion was associated with autism and developmental disorders.
Abstract - Microduplications of 16p11.2 are associated with schizophrenia | Full Text - Microduplications of 16p11.2 are associated with schizophrenia | PDF (363 KB) - Microduplications of 16p11.2 are associated with schizophrenia | Supplementary information
A large-scale replication study identifies TNIP1, PRDM1, JAZF1, UHRF1BP1 and IL10 as risk loci for systemic lupus erythematosus - pp1228 - 1233
Vesela Gateva, Johanna K Sandling, Geoff Hom, Kimberly E Taylor, Sharon A Chung, Xin Sun, Ward Ortmann, Roman Kosoy, Ricardo C Ferreira, Gunnel Nordmark, Iva Gunnarsson, Elisabet Svenungsson, Leonid Padyukov, Gunnar Sturfelt, Andreas Jönsen, Anders A Bengtsson, Solbritt Rantapää-Dahlqvist, Emily C Baechler, Elizabeth E Brown, Graciela S Alarcón, Jeffrey C Edberg, Rosalind Ramsey-Goldman, Gerald McGwin Jr, John D Reveille, Luis M Vilá, Robert P Kimberly, Susan Manzi, Michelle A Petri, Annette Lee, Peter K Gregersen, Michael F Seldin, Lars Rönnblom, Lindsey A Criswell, Ann-Christine Syvänen, Timothy W Behrens & Robert R Graham
doi:10.1038/ng.468
Robert Graham and colleagues report results of a large-scale replication study for systemic lupus erythematosus (SLE) in individuals of European ancestry. Their findings expand the number of confirmed SLE susceptibility loci and implicate several key immunologic pathways in SLE pathogenesis.
Abstract - A large-scale replication study identifies : TNIP1, PRDM1, JAZF1, UHRF1BP1: and : IL10: as risk loci for systemic lupus erythematosus | Full Text - A large-scale replication study identifies TNIP1, PRDM1, JAZF1, UHRF1BP1 and IL10 as risk loci for systemic lupus erythematosus | PDF (1,267 KB) - A large-scale replication study identifies TNIP1, PRDM1, JAZF1, UHRF1BP1 and IL10 as risk loci for systemic lupus erythematosus | Supplementary information
Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus - pp1234 - 1237
Jian-Wen Han, Hou-Feng Zheng, Yong Cui, Liang-Dan Sun, Dong-Qing Ye, Zhi Hu, Jin-Hua Xu, Zhi-Ming Cai, Wei Huang, Guo-Ping Zhao, Hong-Fu Xie, Hong Fang, Qian-Jin Lu, Jian-Hua Xu, Xiang-Pei Li, Yun-Feng Pan, Dan-Qi Deng, Fan-Qin Zeng, Zhi-Zhong Ye, Xiao-Yan Zhang, Qing-Wen Wang, Fei Hao, Li Ma, Xian-Bo Zuo, Fu-Sheng Zhou, Wen-Hui Du, Yi-Lin Cheng, Jian-Qiang Yang, Song-Ke Shen, Jian Li, Yu-Jun Sheng, Xiao-Xia Zuo, Wei-Fang Zhu, Fei Gao, Pei-Lian Zhang, Qing Guo, Bo Li, Min Gao, Feng-Li Xiao, Cheng Quan, Chi Zhang, Zheng Zhang, Kun-Ju Zhu, Yang Li, Da-Yan Hu, Wen-Sheng Lu, Jian-Lin Huang, Sheng-Xiu Liu, Hui Li, Yun-Qing Ren, Zai-Xing Wang, Chun-Jun Yang, Pei-Guang Wang, Wen-Ming Zhou, Yong-Mei Lv, An-Ping Zhang, Sheng-Quan Zhang, Da Lin, Yi Li, Hui Qi Low, Min Shen, Zhi-Fang Zhai, Ying Wang, Feng-Yu Zhang, Sen Yang, Jian-Jun Liu & Xue-Jun Zhang
doi:10.1038/ng.472
Xuejun Zhang and colleagues report results of a genome-wide association study of systemic lupus erythematosus (SLE) in a Chinese Han population. Their work identifies nine new SLE susceptibility loci and reveals overlap in the spectrum of risk alleles shared between Chinese Han and European populations.
Abstract - Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus | Full Text - Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus | PDF (372 KB) - Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus | Supplementary information
SOX2 is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas - pp1238 - 1242
Adam J Bass, Hideo Watanabe, Craig H Mermel, Soyoung Yu, Sven Perner, Roel G Verhaak, So Young Kim, Leslie Wardwell, Pablo Tamayo, Irit Gat-Viks, Alex H Ramos, Michele S Woo, Barbara A Weir, Gad Getz, Rameen Beroukhim, Michael O'Kelly, Amit Dutt, Orit Rozenblatt-Rosen, Piotr Dziunycz, Justin Komisarof, Lucian R Chirieac, Christopher J LaFargue, Veit Scheble, Theresia Wilbertz, Changqing Ma, Shilpa Rao, Hiroshi Nakagawa, Douglas B Stairs, Lin Lin, Thomas J Giordano, Patrick Wagner, John D Minna, Adi F Gazdar, Chang Qi Zhu, Marcia S Brose, Ivan Cecconello, Ulysses Ribeiro Jr, Suely K Marie, Olav Dahl, Ramesh A Shivdasani, Ming-Sound Tsao, Mark A Rubin, Kwok K Wong, Aviv Regev, William C Hahn, David G Beer, Anil K Rustgi & Matthew Meyerson
doi:10.1038/ng.465
Matthew Meyerson and colleagues report that SOX2, which encodes a transcription factor necessary for normal esophageal development, is an amplified lineage survival oncogene in lung and esophageal squamous cell carcinomas.
Abstract - SOX2: is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas | Full Text - SOX2 is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas | PDF (687 KB) - SOX2 is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas | Supplementary information
Rearrangement of CRLF2 in B-progenitor– and Down syndrome–associated acute lymphoblastic leukemia - pp1243 - 1246
Charles G Mullighan, J Racquel Collins-Underwood, Letha A A Phillips, Michael G Loudin, Wei Liu, Jinghui Zhang, Jing Ma, Elaine Coustan-Smith, Richard C Harvey, Cheryl L Willman, Fady M Mikhail, Julia Meyer, Andrew J Carroll, Richard T Williams, Jinjun Cheng, Nyla A Heerema, Giuseppe Basso, Andrea Pession, Ching-Hon Pui, Susana C Raimondi, Stephen P Hunger, James R Downing, William L Carroll & Karen R Rabin
doi:10.1038/ng.469
Charles Mullighan and colleagues report a recurrent rearrangement of CRLF2 in B-progenitor and Down syndrome-associated acute lymphoblastic leukemia. Their genetic and functional evidence indicates that CRLF2 cooperates with activated JAK2 to promote leukemogenesis.
Abstract - Rearrangement of : CRLF2: in B-progenitor- and Down syndrome-associated acute lymphoblastic leukemia | Full Text - Rearrangement of CRLF2 in B-progenitor– and Down syndrome–associated acute lymphoblastic leukemia | PDF (510 KB) - Rearrangement of CRLF2 in B-progenitor– and Down syndrome–associated acute lymphoblastic leukemia | Supplementary information
Activating mutations in FGFR3 and HRAS reveal a shared genetic origin for congenital disorders and testicular tumors - pp1247 - 1252
Anne Goriely, Ruth M S Hansen, Indira B Taylor, Inge A Olesen, Grete Krag Jacobsen, Simon J McGowan, Susanne P Pfeifer, Gilean A T McVean, Ewa Rajpert-De Meyts & Andrew O M Wilkie
doi:10.1038/ng.470
Andrew Wilkie and colleagues report that activating paternal-effect mutations in FGFR3 and HRAS promote clonal expansion in the testis, leading to spermatocytic seminomas. The same mutation in FGFR3 leads to the lethal disorder thanatophoric dysplasia, revealing a shared genetic mechanism for congenital disorders and testicular tumors.
Abstract - Activating mutations in : FGFR3: and : HRAS: reveal a shared genetic origin for congenital disorders and testicular tumors | Full Text - Activating mutations in FGFR3 and HRAS reveal a shared genetic origin for congenital disorders and testicular tumors | PDF (718 KB) - Activating mutations in FGFR3 and HRAS reveal a shared genetic origin for congenital disorders and testicular tumors | Supplementary information
A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies - pp1253 - 1257
Kevin B Jacobs, Meredith Yeager, Sholom Wacholder, David Craig, Peter Kraft, David J Hunter, Justin Paschal, Teri A Manolio, Margaret Tucker, Robert N Hoover, Gilles D Thomas, Stephen J Chanock & Nilanjan Chatterjee
doi:10.1038/ng.455
Kevin Jacobs and colleagues report a new test statistic for detection of membership of an individual within a genome-wide association study, based on reporting of study genotype frequencies.
Abstract - A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies | Full Text - A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies | PDF (548 KB) - A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies | Supplementary information
See also: News and Views by Schork & Bansal


