Correspondence should be addressed to Agnar Helgason agnar@decode.is
The impact of population structure on association studies undertaken to identify genetic variants underlying common human diseases is an issue of growing interest1,
2,
3,
4. Spurious associations of alleles with disease phenotypes may be obtained or true associations overlooked when allele frequencies differ notably among subpopulations that are not represented equally among cases and controls. Population structure influences even carefully designed studies and can affect the validity of association results1,
2. Most study designs address this problem by sampling cases and controls from groups that share the same nationality or self-reported ethnic background, with the implicit assumption that no substructure exists within such groups. We examined population structure in the Icelandic gene pool using extensive genealogical and genetic data. Our results indicate that sampling strategies need to take account of substructure even in a relatively homogenous5 genetic isolate6. This will probably be even more important in larger populations.
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