Journal home
Advance online publication
Current issue
Archive
Press releases
Free Association (blog)
Supplements
Focuses
Guide to authors
Online submissionOnline submission
For referees
Free online issue
Contact the journal
Subscribe
Advertising
work@npg
Reprints and permissions
About this site
For librarians
 
NPG Resources
Nature
Nature Biotechnology
Nature Cell Biology
Nature Medicine
Nature Methods
Nature Reviews Cancer
Nature Reviews Genetics
Nature Reviews Molecular Cell Biology
news@nature.com
Nature Conferences
RNAi Gateway
NPG Subject areas
Biotechnology
Cancer
Chemistry
Clinical Medicine
Dentistry
Development
Drug Discovery
Earth Sciences
Evolution & Ecology
Genetics
Immunology
Materials Science
Medical Research
Microbiology
Molecular Cell Biology
Neuroscience
Pharmacology
Physics
Browse all publications
Letter
Nature Genetics  15, 277 - 280 (1997)
doi:10.1038/ng0397-277

Localization of the gene for familial primary pulmonary hypertension to chromosome 2q31−32

William C. Nichols1, Daniel L. Koller4, Bonnie Slovis3, Tatiana Foroud4, Valeri H. Terry3, Nathan D. Arnold3, David R. Siemieniak3, Lisa Wheeler5, John A. Phillips III6, John H. Newman5, P. Michael Conneally4, David Ginsburg1, 2, 3 & James E. Loyd5

  1Departments of Internal Medicine, University of Michigan Medical Center, Ann Arbor, Michigan 48109, USA.

  2Departments of Human Genetics, University of Michigan Medical Center, Ann Arbor, Michigan 48109, USA.

  3Departments of Howard Hughes Medical Institute, University of Michigan Medical Center, Ann Arbor, Michigan 48109, USA.

  4Department of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana 46202, USA.

  5Departments of Internal Medicine, Vanderbilt University Medical Center, Nashville, Tennessee 37232, USA.

  6Departments of Pediatrics, Vanderbilt University Medical Center, Nashville, Tennessee 37232, USA.

  7Correspondence should be addressed to: D. G. at 4520 MSRBI, 1150 W. Medical Center Drive, Ann Arbor, Michigan 48109-0650, USA. e-mail: ginsburg@umich.edu.

Primary pulmonary hypertension (PPH)f an often fatal disease, is characterized by elevated pulmonary artery pressures in the absence of a secondary cause1. Endovascular occlusion in the smallest pulmonary arteries occurs by proliferation of cells and matrix, with thrombus and vasospasm2. Diagnosis is often delayed because the initial symptoms of fatigue and dyspnea on exertion are nonspecific and definitive diagnosis requires invasive procedures. The average life expectancy after diagnosis is two to three years with death usually due to progressive right heart failure3. The aetiology of the disease is unknown. Although most cases appear to be sporadic, approx6% of cases recorded in the NIH Primary Pulmonary Hypertension Registry are inherited in an autosomal dominant manner with reduced penetrance4−6. Following a genome-wide search using a set of highly polymorphic short tandem repeat (STR) markers and 19 affected individuals from six families, initial evidence for linkage was obtained with two chromosome 2q markers. We subsequently genotyped patients and all available family members for 19 additional markers spanning approx40 centiMorgans (cM) on the long arm of chromosome 2. We obtained a maximum two-point lod score of 6.97 at theta=0 with the marker D2S389; multipoint linkage analysis yielded a maximum lod score of 7.86 with the marker D2S311. Haplotype analysis established a minimum candidate interval of approx25 cM.


REFERENCES
  1. Rubin, L.J. Primary pulmonary hypertension. Chest 104, 236−250 (1993). | PubMed  | ISI | ChemPort |
  2. Loyd, J.E. Atkinson, J.B. Pietra, G.G. Virmani, R. & Newman, J.H. Heterogeneity of pathologic lesions in familial primary pulmonary hypertension. Am. Rev. Respir. Dis. 138, 952−957 (1988). | PubMed  | ISI | ChemPort |
  3. D'Alonzo, G.E. et al. Survival in patients with primary pulmonary hypertension. Results from a national prospective registry. Ann. Intern. Med. 115, 343−349 (1991). | PubMed  | ChemPort |
  4. Rich, S. et al. Primary pulmonary hypertension. A national prospective study. Ann. Intern. Med. 107, 216−223 (1987). | PubMed  | ISI | ChemPort |
  5. Loyd, J.E. et al. Genetic anticipation and abnormal gender ratio at birth in familial primary pulmonary hypertension. Am. J. Respir. Crit. Care Med. 152, 93−97 (1995). | PubMed  | ISI | ChemPort |
  6. Loyd, J.E. Primm, R.K. & Newman, J.H. Familial primary pulmonary hypertension: clinical patterns. Am. Rev. Respir. Dis. 129, 194−197 (1984). | PubMed  | ISI | ChemPort |
  7. O'Connell, J.R. & Weeks, D.E. The VITESSE algorithm for rapid exact multilocus linkage analysis via genotype set-recoding and fuzzy inheritance. Nature Genet. 11, 402−408 (1995). | Article | PubMed  | ChemPort |
  8. Matise, T.C. Perlin, M. & Chakravarti, A. Automated construction of genetic linkage maps using an expert system (Multimap): a human genome linkage map. Nature Genet. 6, 384−390 (1994). | Article | PubMed  | ISI | ChemPort |
  9. Terwilliger, J.D. & Ott, J. Handbook of Human Genetic Linkage (Johns Hopkins University Press, Baltimore, 1994).
  10. Ott, J. Analysis of Human Genetic Linkage (Johns Hopkins University Press, Baltimore, 1991).
  11. Dresdale, D.T. Schultz, M. & Michtom, R.J. Primary pulmonary hypertension: 1 Clinical and hemodynamic study. Am. J. Med. 11, 686−701 (1951). | Article | PubMed  | ISI | ChemPort |
  12. Dresdale, D.T. Michtom, R.J. & Schultz, M. Recent studies in primary pulmonary hypertension including pharmacodynamic observartions on pulmonary vascular resistance. Bull. N.Y. Acad. Med. 30, 195−207 (1954). | ChemPort |
  13. Morse, J.H. Barst, R.J. & Fotino, M. Familial pulmonary hypertension: immunogenetic findings in four Caucasian kindreds. Am. Rev. Respir. Dis. 145, 787−792 (1992). | PubMed  | ISI | ChemPort |
  14. Girard, T.J. et al. Structure of the human lipoprotein-associated coagulation inhibitor gene. Intron/exon gene organization and localization of the gene to chromosome 2. J. Biol. Chem. 266, 5036−5041 (1991). | PubMed  | ISI | ChemPort |
  15. Fernandez-Ruiz, E. Pardo-Manuel de Villena, R. Rodriguez de Cordoba, S. & Sanchez-Madrid, F. Regional localization of the human vitronectin receptor alpha subunit gene(VNRA) to chromosome 2q31−q32. Cytogenet. Cell Genet. 62, 26−28 (1993). | PubMed  | ChemPort |
  16. Solomon, E. et al. Chromosomal assignments of the genes coding for human types II, III, and IV collagen: a dispersed gene family. Proc. Natl. Acad. Sci. USA 82, 3330−3334 (1985). | PubMed  | ChemPort |
  17. Emanuel, B.S. Cannizzaro, L.A. Seyer, J.M. & Myers, J.C. Human alpha 1(111) and alpha 2(V) procollagen genes are located on the long arm of chromosome 2. Proc. Natl. Acad. Sci. USA 82, 3385−3389 (1985). | PubMed  | ChemPort |
  18. Acampora, D. et al. The human HOX gene family. Nucl. Acids Res. 17, 10385−10402 (1989). | PubMed  | ISI | ChemPort |
  19. Willems, P.J. Dynamic mutations hit double figures. Nature Genet. 8, 213−215 (1994). | Article | PubMed  | ISI | ChemPort |
  20. Morahan, G. Huang, D. Tait, B.D. Colman, P.G. & Harrison, L.C. Markers on distal chromosome 2q linked to insulin-dependent diabetes mellitus. Science 272, 1811−1813 (1996). | PubMed  | ISI | ChemPort |
  21. Schuler, G.D. et al. A gene map of the human genome. Science 274, 540−546 (1996). | Article | PubMed  | ISI | ChemPort |
  22. Abenhaim, L. et al. Appetite-suppressant drugs and the risk of primary pulmonary hypertension. International Primary Pulmonary Hypertension Study Group. N. Engl. J. Med. 335, 609−616 (1996). | Article | PubMed  | ISI | ChemPort |
  23. Dib, C. et al. A comprehensive genetic map of the human genome based on 5,264 microsatellites. Nature 380, 152−154 (1996). | Article | PubMed  | ISI | ChemPort |
  24. Sheffield, V.C. et al. A collection of tri- and tetranucleotide repeat markers used to generate high quality, high resolution human genome-wide linkage maps. Hum. Mol. Genet. 4, 1837−1844 (1995). | PubMed  | ISI | ChemPort |
  25. Murray, J.C. et al. A comprehensive human linkage map with centimorgan density. Science 265, 2049−2054 (1994). | PubMed  | ISI | ChemPort |
  26. Hudson, T.J. et al. An STS-based map of the human genome. Science 270, 1945−1954 (1995). | PubMed  | ISI | ChemPort |
  27. Schaffer, A.A. Gupta, S.K. Shriram, K. & Cottingham, R.W.Jr. Avoiding recomputation in linkage analysis. Hum. Hered. 44, 225−237 (1994). | PubMed  | ISI | ChemPort |
  28. Cottingham, R.W.Jr. Idury, R.M. & Schaffer, A.A. Faster sequential genetic linkage computations. Am. J. Hum. Genet. 53, 252−263 (1993). | PubMed  | ISI |
  29. Lathrop, G.M. & Lalouel, J.M. Easy calculations of lod scores and genetic risks on small computers. Am. J. Hum. Genet. 36, 460−465 (1984). | PubMed  | ISI | ChemPort |
  30. Boehnke, M. Allele frequency estimation from data on relatives. Am. J. Hum. Genet. 48, 22−25 (1991). | PubMed  | ISI | ChemPort |
 Top
 Top
References
Previous | Next
Table of contents
Download PDFDownload PDF
Send to a friendSend to a friend
Save this linkSave this link

Open Innovation Challenges

naturejobs

  • Carbohydrate Chemistry

    • Praj Matrix - Praj Industries Ltd
    • Pune, Maharashtra Pune-411021 India
  • Executive Director & Deans

    • Translational Health Science and Technology Institute (THSTI); C / o National Institute of Immunology
    • Delhi 110067 India
References
Export citation
Export references
natureproducts

Search buyers guide:

 
ADVERTISEMENT
 
Nature Genetics
ISSN: 1061-4036
EISSN: 1546-1718
Journal home | Advance online publication | Current issue | Archive | Press releases | Supplements | Focuses | For authors | Online submission | Permissions | For referees | Free online issue | About the journal | Contact the journal | Subscribe | Advertising | work@npg | naturereprints | About this site | For librarians
Nature Publishing Group, publisher of Nature, and other science journals and reference works©1997 Nature Publishing Group | Privacy policy