In this issue - pv
doi:10.1038/nchembio0307-v
doi:10.1038/nchembio0307-127
Scientists from across the chemistry and biology communities often have divergent ideas of what constitutes mechanistic insight into a biological system. Science that forges a middle ground between these disciplines offers the best way forward for chemical biologists.
Full Text - A mechanistic meeting point | PDF (350 KB) - A mechanistic meeting point
Stefan Lutz
doi:10.1038/nchembio0307-128
The broad range of techniques used in chemical biology presents many challenges in reporting, translating and implementing experimental knowledge. By taking advantage of some readily available solutions and instituting some new approaches, it should be possible to more effectively disseminate technological advances.
Full Text - Tools, tricks and trade secrets: the challenges of disseminating methodology | PDF (566 KB) - Tools, tricks and trade secrets: the challenges of disseminating methodology
Rami N Hannoush
doi:10.1038/nchembio0307-131
Chemical and genetic approaches are extensively used to probe living systems at the subcellular level and to advance therapeutic target discovery. The 2006 American Society for Cell Biology meeting highlighted the growing importance of chemical biology approaches in cell biology research.
Full Text - Probing cellular systems with chemistry | PDF (626 KB) - Probing cellular systems with chemistry
Young-Tae Chang
doi:10.1038/nchembio0307-135
The zebrafish is a highly promising model system for vertebrate genetics study, but the temporal control of gene expression has remained underdeveloped. A new chemical genetic system using a small-molecule switch for protein synthesis promises to increase the usefulness of the zebrafish as a vertebrate model system.
Full Text - Small-molecule switch for zebrafish gene expression | PDF (718 KB) - Small-molecule switch for zebrafish gene expression
See also: Brief Communication by Esengil et al.
John J Rossi
doi:10.1038/nchembio0307-136
Short double-stranded RNA duplexes are the triggers for post-transcriptional gene silencing and can also induce epigenetic silencing of genes at the level of transcription. A surprising new finding is that short RNA duplexes targeted to promoter regions can also mediate potent enhancement of transcription.
Full Text - Transcriptional activation by small RNA duplexes | PDF (862 KB) - Transcriptional activation by small RNA duplexes
See also: Article by Janowski et al.
Morten Frödin
doi:10.1038/nchembio0307-138
The presence of 491 very similar protein kinases in humans has proven to be a serious obstacle to generating specific kinase inhibitors and assessing their selectivity. Now, rational drug design has led to the generation of an irreversible kinase inhibitor with built-in features for demonstrating specificity in cells.
Full Text - A RSK kinase inhibitor reporting its selectivity in vivo | PDF (705 KB) - A RSK kinase inhibitor reporting its selectivity in vivo
See also: Letter by Cohen et al.
Urs Albrecht
doi:10.1038/nchembio0307-139
The circadian clock runs with a period of about 24 h and therefore allows mammals to predict sunrise at the cellular level. Phosphorylation of the clock protein period 2 influences this process by varying the clock's period length.
Full Text - Per2 has time on its side | PDF (1,031 KB) - Per2 has time on its side
G Balázsi & J J Collins
doi:10.1038/nchembio0307-141
Despite having an increasingly accurate parts list for biological cells, much is left to discover about how these parts act together to create functional cells, and how distinct individual cells interact to create functional tissues and organs. Biologists are increasingly aware of the cell-to-cell variability in molecule copy numbers—a trend that is revealed by several new techniques, including one that permits counting molecules in single cells.
Full Text - Taking the inventory inside single cells | PDF (1,295 KB) - Taking the inventory inside single cells
doi:10.1038/nchembio0307-143
Full Text - Research highlights | PDF (373 KB) - Research highlights
Abdullah Ozer & Richard K Bruick
doi:10.1038/nchembio863

Abstract - Non-heme dioxygenases: cellular sensors and regulators jelly rolled into one? | Full Text - Non-heme dioxygenases: cellular sensors and regulators jelly rolled into one? | PDF (1,370 KB) - Non-heme dioxygenases: cellular sensors and regulators jelly rolled into one?
Hanife Esengil, Vicky Chang, John K Mich & James K Chen
doi:10.1038/nchembio858

Abstract - Small-molecule regulation of zebrafish gene expression | Full Text - Small-molecule regulation of zebrafish gene expression | PDF (424 KB) - Small-molecule regulation of zebrafish gene expression | Supplementary information | Chemical compounds
See also: News and Views by Chang
Michael S Cohen, Haralambos Hadjivassiliou & Jack Taunton
doi:10.1038/nchembio859

First Paragraph - A clickable inhibitor reveals context-dependent autoactivation of p90 RSK | Full Text - A clickable inhibitor reveals context-dependent autoactivation of p90 RSK | PDF (545 KB) - A clickable inhibitor reveals context-dependent autoactivation of p90 RSK | Supplementary information | Chemical compounds
See also: News and Views by Frödin
M D Mostaqul Huq, Nien-Pei Tsai, Ya-Ping Lin, LeeAnn Higgins & Li-Na Wei
doi:10.1038/nchembio861

First Paragraph - Vitamin B6 conjugation to nuclear corepressor RIP140 and its role in gene regulation | Full Text - Vitamin B6 conjugation to nuclear corepressor RIP140 and its role in gene regulation | PDF (545 KB) - Vitamin B6 conjugation to nuclear corepressor RIP140 and its role in gene regulation | Supplementary information | Chemical compounds
Bethany A Janowski, Scott T Younger, Daniel B Hardy, Rosalyn Ram, Kenneth E Huffman & David R Corey
doi:10.1038/nchembio860

Abstract - Activating gene expression in mammalian cells with promoter-targeted duplex RNAs | Full Text - Activating gene expression in mammalian cells with promoter-targeted duplex RNAs | PDF (558 KB) - Activating gene expression in mammalian cells with promoter-targeted duplex RNAs | Supplementary information | Chemical compounds
See also: News and Views by Rossi
Thomas Voets, Grzegorz Owsianik, Annelies Janssens, Karel Talavera & Bernd Nilius
doi:10.1038/nchembio862

Abstract - TRPM8 voltage sensor mutants reveal a mechanism for integrating thermal and chemical stimuli | Full Text - TRPM8 voltage sensor mutants reveal a mechanism for integrating thermal and chemical stimuli | PDF (848 KB) - TRPM8 voltage sensor mutants reveal a mechanism for integrating thermal and chemical stimuli | Supplementary information | Chemical compounds
Yelena Margolin, Jean-Francois Cloutier, Vladimir Shafirovich, Nicholas E Geacintov & Peter C Dedon
doi:10.1038/nchembio0307-183
Full Text - Corrigendum: Paradoxical hotspots for guanine oxidation by a chemical mediator of inflammation | PDF (322 KB) - Corrigendum: Paradoxical hotspots for guanine oxidation by a chemical mediator of inflammation
Nature Chemical Biology
ISSN: 1552-4450
EISSN: 1548-7105
