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Please quote Nature Biotechnology as the source of these items.

The August 2006 issue of Nature Biotechnology is available online.

 August 2006 Previous Next

New class of cancer therapeutic

Nature Biotechnology pp 1005 - 1015

Scientists have created a new class of cancer drug that combines the targeting strength of one type of ribonucleic acid (RNA) therapy with the therapeutic potency of another. Bruce Sullenger and colleagues have created a hybrid drug molecule that not only precisely targets diseased prostate cancer cells but also reduces levels of proteins that normally protect cancer cells from self destructing. The cancer agent is shown to effectively kill prostate tumors in mice, in a paper to be published in the August issue of Nature Biotechnology.

Aptamers are short nucleic acids with highly specific shapes that enable them to bind tightly to specific protein targets. There is already one aptamer drug on the market for the treatment of the eye disease age-related macular degeneration. Small-interfering RNAs, which specifically block the formation of proteins, are also making headlines as they progress through to the clinic.

The team's new type of RNA therapy combines the exquisite targeting capacity of an aptamer, which binds to a protein expressed specifically on the surface of prostate cancer cells, with the ability of two siRNA molecules to destroy RNA messages within the cancer cells that promote their survival.

Until now, approaches for delivering siRNA therapies to patients have been hampered by poor efficiency, a lack of specificity and unwanted immune responses in patients. It is hoped that the incorporation of aptamers into other siRNA therapies may overcome some of these problems and provide an effective means of targeting and killing diseased cells, although this will clearly require further experiments and studies to establish long-term side-effects and benefits.


Cell type-specific delivery of siRNAs with aptamer-siRNA chimeras pp 1005 - 1015
James O McNamara II, Eran R Andrechek, Yong Wang, Kristi D Viles, Rachel E Rempel, Eli Gilboa, Bruce A Sullenger & Paloma H Giangrande
Published online: 25 June 2006 | doi:10.1038/nbt1223
Abstract | Full text | PDF | Supplementary Information
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Genomic blueprint for oil slick cleanup bacterium

Nature Biotechnology pp 997 - 1004

The complete genome sequence of an oil-eating bacterium that plays a key role in the cleanup of oil spills is reported in the August issue of Nature Biotechnology. The genome sequence of the bacterium, Alcanivorax borkumensis, provides the complete blueprint of biochemical functions and physiological adaptations that allow this bug to so efficiently biodegrade crude oil in the ocean.

Oil tanker accidents account for only a small percentage of the 1.3 million tons of petroleum released either accidentally or deliberately into the oceans annually. However, thanks to the appetite of some specialized marine bacteria for the hydrocarbons contained in oil, spills in our oceans can be slowly broken down.

Schneiker and colleagues have now sequenced the 3.1 Mb long genome of A. borkumensis. Among oil-eating bacteria, A. borkumensis stands out as one that almost exclusively degrades linear and branched organic compounds called alkanes, two major, resilient components of crude oil. The gene sequence of the bug contains 2,755 predicted open reading frames that include a wide range of alkane-degrading systems in addition to other functions, such as emulsifying compounds and exopolymers, which contribute to the formation of oil droplets that facilitate oil breakdown by A. borkumensis.


Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis pp 997 - 1004
Susanne Schneiker, Vítor AP Martins dos Santos, Daniela Bartels, Thomas Bekel, Martina Brecht, Jens Buhrmester, Tatyana N Chernikova, Renata Denaro, Manuel Ferrer, Christoph Gertler, Alexander Goesmann, Olga V Golyshina, Filip Kaminski, Amit N Khachane, Siegmund Lang, Burkhard Linke, Alice C McHardy, Folker Meyer, Taras Nechitaylo, Alfred Pühler, Daniela Regenhardt, Oliver Rupp, Julia S Sabirova, Werner Selbitschka, Michail M Yakimov, Kenneth N Timmis, Frank-Jörg Vorhölter, Stefan Weidner, Olaf Kaiser & Peter N Golyshin
Published online: 30 July 2006 | doi:10.1038/nbt1232
Abstract | Full text | PDF | Supplementary Information
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ISSN: 1087-0156
EISSN: 1546-1696
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