Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • News & Views
  • Published:

Uniting ENCODE with genome-wide proteomics

An important goal of future omics research is to determine how the annotated regions of the genome control the production of protein isoforms.

This is a preview of subscription content, access via your institution

Relevant articles

Open Access articles citing this article.

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Synergies to be achieved by uniting ENCODE and C-HPP.

References

  1. ENCODE Project Consortium. Nature 489, 57–74 (2012).

  2. Paik, Y.K. et al. Nat. Biotechnol. 30, 221–223 (2012).

    Article  CAS  Google Scholar 

  3. Sidoli, S. et al. J. Proteomics 75, 3419–3433 (2012).

    Article  CAS  Google Scholar 

  4. Tran, J.C. et al. Nature 480, 254–258 (2011).

    Article  CAS  Google Scholar 

  5. Harrow, J. et al. Genome Res. 22, 1760–1774 (2012).

    Article  CAS  Google Scholar 

  6. http://www.ensembl.org/, http://www.genecards.org/, http://www.nextprot.org/, http://gpmdb.thegpm.org/, http://www.peptideatlas.org/, http://www.proteinatlas.org/.

  7. Lundberg, E. et al. Mol. Syst. Biol. 6, 450 (2010).

    Article  Google Scholar 

  8. Germann, S. et al. J. Nucleic Acids. 2012, 269570 (2012).

    Article  Google Scholar 

  9. Califano, A. et al. Nat. Genet. 44, 841–847 (2012).

    Article  CAS  Google Scholar 

  10. Kauraniemi, P. et al. Cancer Res. 61, 8235–8240 (2001).

    CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Young-Ki Paik or William S Hancock.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Paik, YK., Hancock, W. Uniting ENCODE with genome-wide proteomics. Nat Biotechnol 30, 1065–1067 (2012). https://doi.org/10.1038/nbt.2416

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/nbt.2416

This article is cited by

Search

Quick links

Nature Briefing: Translational Research

Sign up for the Nature Briefing: Translational Research newsletter — top stories in biotechnology, drug discovery and pharma.

Get what matters in translational research, free to your inbox weekly. Sign up for Nature Briefing: Translational Research