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Data quality in genomics and microarrays

Nature Biotechnology volume 24, pages 1112–1113 (2006)Cite this article

Objective quality control indices are needed to facilitate clinical implementation of DNA microarrays used in transcriptional profiling as well as other types of genomic analysis.

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Figure 1: DNA microarray analysis of human tissues involves multiple steps and protocols.

References

  1. Steinmetz, L.M. & Davis, R.W. Nat. Rev. Genet. 5, 190–201 (2004).

    Article  CAS  Google Scholar 

  2. Tan, P.K. et al. Nucleic Acids Res. 31, 5676–5684 (2003).

    Article  CAS  Google Scholar 

  3. Tibshirani, R. N. Engl. J. Med. 352, 1496–1497 (2005).

    Article  CAS  Google Scholar 

  4. Jarvinen, A.K. et al. Genomics 83, 1164–1168 (2004).

    Article  CAS  Google Scholar 

  5. Bammler, T. et al. Nat. Methods 2, 351–356 (2005).

    Article  Google Scholar 

  6. Irizarry, R.A. et al. Nat. Methods 2, 345–350 (2005).

    Article  CAS  Google Scholar 

  7. Larkin, J.E., Frank, B.C., Gavras, H., Sultana, R. & Quackenbush, J. Nat. Methods 2, 337–344 (2005).

    Article  CAS  Google Scholar 

  8. Shi, L. et al. BMC Bioinformatics 6 Suppl 2, S12 (2005).

    Article  Google Scholar 

  9. MACQ Consortium. Nat. Biotechnol. 24, 1151–1161 (2006).

  10. Baker, S.C. et al. Nat. Methods 2, 731–734 (2005).

    Article  CAS  Google Scholar 

  11. Cobb, J.P. et al. Proc. Natl. Acad. Sci. USA 102, 4801–4806 (2005).

    Article  CAS  Google Scholar 

  12. van Bakel, H. & Holstege, F.C. EMBO Rep. 5, 964–969 (2004).

    Article  CAS  Google Scholar 

  13. Eason, R.G. et al. Proc. Natl. Acad. Sci. USA 101, 11046–11051 (2004).

    Article  CAS  Google Scholar 

Download references

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Authors and Affiliations

  1. Department of Medicine, Division of Oncology,

    Hanlee Ji & Ronald W Davis

  2. Department of Biochemistry and Department of Genetics at Stanford University School of Medicine, 269 Campus Drive, CCSR 1115, Stanford, 94305-5151, California, USA

    Hanlee Ji & Ronald W Davis

Authors
  1. Hanlee Ji
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  2. Ronald W Davis
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Ji, H., Davis, R. Data quality in genomics and microarrays. Nat Biotechnol 24, 1112–1113 (2006). https://doi.org/10.1038/nbt0906-1112

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