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Technical Report
Nature Biotechnology  20, 500 - 505 (2002)
doi:10.1038/nbt0502-500

Expression of small interfering RNAs targeted against HIV-1 rev transcripts in human cells

Nan Sook Lee1, Taikoh Dohjima1, Gerhard Bauer1, Haitang Li1, Ming-Jie Li1, Ali Ehsani1, 3, Paul Salvaterra2, 3 & John Rossi1, 3

1  Division of Molecular Biology, Graduate School of Biological Sciences, City of Hope, Duarte, CA 91010.

2  Division of Neuroscience, Graduate School of Biological Sciences, City of Hope, Duarte, CA 91010.

3  Division of Beckman Research Institute of the City of Hope, Graduate School of Biological Sciences, City of Hope, Duarte, CA 91010.

Correspondence should be addressed to John Rossi jrossi@bricoh.edu
RNA interference (RNAi) is the process of sequence-specific, posttranscriptional gene silencing in animals and plants initiated by double-stranded (ds) RNA that is homologous to the silenced gene1, 2, 3, 4, 5, 6, 7. This technology has usually involved injection or transfection of dsRNA in model nonvertebrate organisms. The longer dsRNAs are processed into short (19−25 nucleotides) small interfering RNAs (siRNAs) by a ribonucleotide−protein complex that includes an RNAse III−related nuclease (Dicer)7, a helicase family member8, and possibly a kinase9 and an RNA-dependent RNA polymerase (RdRP)10, 11. In mammalian cells it is known that dsRNA 30 base pairs or longer can trigger interferon responses that are intrinsically sequence-nonspecific12, thus limiting the application of RNAi as an experimental and therapeutic agent. Duplexes of 21-nucleotide siRNAs with short 3' overhangs, however, can mediate RNAi in a sequence-specific manner in cultured mammalian cells12, 13. One limitation in the use of siRNA as a therapeutic reagent in vertebrate cells is that short, highly defined RNAs need to be delivered to target cells—a feat thus far only accomplished by the use of synthetic, duplex RNAs delivered exogenously to cells12, 13. In this report, we describe a mammalian Pol III promoter system capable of expressing functional double-stranded siRNAs following transfection into human cells. In the case of the 293 cells cotransfected with the HIV-1 pNL4-3 proviral DNA and the siRNA-producing constructs, we were able to achieve up to 4 logs of inhibition of expression from the HIV-1 DNA.

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Nature Biotechnology
ISSN: 1087-0156
EISSN: 1546-1696
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