Nature Biotechnology
14, 629 - 634 (1996)
doi:10.1038/nbt0596-629
Translational level is a critical factor for the secretion of heterologous proteins in Escherichia coliLaura C. Simmons1, *
& Daniel G. Yansura1
1Department of Molecular Biology, Genentech, Inc., 460 Point San Bruno Blvd., South San Francisco, CA 94080.
*e-mail: simmons@gene.com. A method for enhancing the secretion of heterologous proteins in Escherichia coli by optimizing, as opposed to simply maximizing, the translational level of a given protein is described. Random alteration of the translational initiation region (TIR) of the Heat-Stable Enterotoxin II (STII) signal sequence resulted in a library of vectors with varied translational strengths. Subsequent screening of this library using E. coli alkaline phosphatase as a reporter led to the selection of several TIR variants covering a 10-fold range of translational strength. These TIR variants, in combination with several previously generated variants, are shown to dramatically improve the secretion of a number of heterologous proteins. In fact, the heterologous proteins tested required a narrow translational range for optimal high-level secretion into the periplasm. Interestingly, the secretion of two native E. coli proteins was unaffected by TIR strength when tested over an identical range. The dependence of secretion on a narrow translational level demonstrates its critical role in the secretion of heterologous proteins in E. coli. REFERENCES
- Yansura, D.G. and Henner, D.J. 1990. Use of Escherichia coli trp promoter for direct expression of proteins. Methods Enzymol. 185: 54−60. | Article | PubMed | ChemPort |
- Studier, F.W., Rosenberg, A.H., Dunn, J.J. and Dubendorff, J.W. 1990. Use of T7 RNA polymerase to direct expression of cloned genes. Methods Enzymol. 185: 60−89. | PubMed | ChemPort |
- Das, A. 1990. Overproduction of proteins in Escherichia coli: Vectors, hosts and strategies. Methods Enzymol. 182: 93−112. | Article | PubMed | ISI | ChemPort |
- Yansura, D.G. and Simmons, L.C. 1992. Nucleotide sequence selection for increased expression of heterologous genes in Escherichia coli. Methods: A Companion to Methods Enzymol. 4: 151−158. | ChemPort |
- Yansura, D.G. 1990. Expression as trpE fusion. Methods in Enzymol. 185: 161−166. | Article | ChemPort |
- Frangioni, J.V. and Neel, B.G. 1993. Solubilization and purification of enzymatically active glutathione S-transferase (pGEX) fusion proteins. Anal. Biochem. 210: 179−187. | Article | PubMed | ISI | ChemPort |
- Uhlen, M. and Moks, T. 1990. Gene fusions for purpose of expression: An introduction. Methods in Enzymol. 185: 129−143. | Article | ChemPort |
- Bardwell, J.C.A., Lee, J., Jander, G., Martin, N., Belin, D. and Beckwith, J. 1993. A pathway for disulfide bond formation in vivo. Proc. Natl. Acad. Sci. USA 90: 1038−1042. | PubMed | ChemPort |
- Gray, G.L., Baldridge, J.S., McKeown, K.S., Heyneker, H.L. and Chang, C.N. 1985. Periplasmic production of correctly processed human growth hormone in Escherichia coli: natural and bacterial signal sequences are interchangeable. Gene 39: 247−254. | Article | PubMed | ISI | ChemPort |
- Klein, B.K., Polazzi, J.O., Devine, C.S., Rangwala, S.H. and Olins, P.O. 1992. Effects of signal peptide changes on the secretion of bovine somatotropin (bST) from Escherichia coli. Protein Eng. 5: 511−517. | PubMed | ISI | ChemPort |
- Wong, E.Y., Seetharam, R., Kotts, C.E., Heeren, R.A., Klein, B.K., Braford, S.R. et al. 1988. Expression of secreted insulin-like growth factor-1 in Escherichia coli. Gene 68: 193−203. | Article | PubMed | ISI | ChemPort |
- Denefle, P., Kovarik, S., Ciora, T., Gosselet, N., Benichou, J., Latta, M. et al. 1989. Heterologous protein export in Escherichia coli: influence of bacterial signal peptides on the export of human interleukin 1
. Gene 85: 499−510. | Article | PubMed | ISI | ChemPort |
- Chang, C., Rey, M., Bochner, B., Heyneker, H. and Gray, G. 1987. High-level secretion of human growth hormone by Escherichia coli. Gene 55: 189−196. | Article | PubMed | ISI | ChemPort |
- Morioka-Fujimoto, K., Marumoto, R. and Fukuda, T. 1991. Modified enterotoxin signal sequences increase secretion level of the recombinant human epidermal growth factor in Escherichia coli. J. Biol. Chem. 266: 1728−1732. | PubMed | ChemPort |
- Goldstein, J., Lehnhardt, S. and Inouye, M. 1990. Enhancement of protein translocation across the membrane by specific mutations in the hydrophobic region of the signal peptide. J. Bacteriol. 172: 1225−1231. | PubMed | ISI | ChemPort |
- Lehnhardt, S., Pollitt, S. and Inouye, M. 1987. The differential effect on two hybrid proteins of deletion mutations within the hydrophobic region of the Escherichia coli OmpA signal peptide. J. Biol. Chem. 262: 1716−1719. | PubMed | ISI | ChemPort |
- Perez-Perez, J., Marquez, G., Barbero, J. and Gutierrez, J. 1994. Increasing the efficiency of protein export in Escherichia coli. Bio/Technology 12: 178−180. | PubMed | ChemPort |
- van Dijl, J.M., De Jong, A., Smith, H., Bron, S. and Venema, G. 1991. Signal peptidase I overproduction results in increased efficiencies of export and maturation of hybrid secretory proteins in Escherichia coli. Mol. Gen. Genet. 227: 40−48. | PubMed | ChemPort |
- McCarthy, J.E.G. and Gualerzi, C. 1990. Translational control of prokaryotic gene expression. Trends in Genetics 6: 78−85. | Article | PubMed | ISI | ChemPort |
- Gold, L. 1988. Posttranscriptional regulatory mechanisms in Escherichia coli. Ann. Rev. Biochem. 57: 199−233. | Article | PubMed | ISI | ChemPort |
- Picken, R.N., Mazaitis, A.J., Maas, W.K., Rey, M. and Heyneker, H. 1983. Nucleotide sequence of the gene for Heat-Stable Enterotoxin II of Escherichia coli. Infect Immun. 42: 269−275. | PubMed | ISI | ChemPort |
- Inouye, H., Michaelis, S., Wright, A. and Beckwith, J. 1981. Cloning and restriction mapping of the alkaline phosphatase structural gene (phoA) of Escherichia coli and generation of deletion mutants in vitro. J. Bacteriol. 146: 668−675. | PubMed | ISI | ChemPort |
- Amemura, M., Shinagawa, H., Makino, K., Otsuji, N. and Nakata, A. 1982. Cloning and complementation tests with alkaline phosphatase regulatory genes (phoS and phoT) of Escherichia coli. J. Bacteriol. 152: 692−701. | PubMed | ISI | ChemPort |
- Varenne, S., Buc, J., Lloubes, R. and Lazdunski, C. 1984. Translation is a non-uniform process: Effect of tRNA availability on the rate of elongation of nascent polypeptide chains. J. Mol. Biol. 180: 549−576. | PubMed | ISI | ChemPort |
- Hartz, D., McPheeters, D.S. and Gold, L. 1991. Influence of mRNA determinants on translation initiation in Escherichia coli. J. Mol. Biol. 218: 83−97. | PubMed | ISI | ChemPort |
- Ringquist, S., Shinedling, S., Barrick, D., Green, L., Binkley, J., Stormo, G.D. et al. 1992. Translation initiation in Escherichia coli: sequences within the ribosome-binding site. Mol. Microbiol. 6(9): 1219−1229. | PubMed | ISI | ChemPort |
- Schall, T.J., Jongstra, J., Dyer, B.J., Jorgensen, J., Clayberger, C., Davis, M.M. et al. 1988. A human T cell-specific molecule is a member of a new gene family. J. Immunol. 141: 1018−1025. | PubMed | ISI | ChemPort |
- Jones, K.R. and Reichardt, L.F. 1990. Molecular cloning of a human gene that is a member of the nerve growth factor family. Proc. Natl. Acad. Sci. USA 87: 8060−8064. | PubMed | ChemPort |
- Staunton, D.E., Marlin, S.D., Stratowa, C., Dustin, M.L. and Springer, T.A. 1988. Primary structure of ICAM-1 demonstrates interaction between members of the immunoglobin and integrin supergene families. Cell 52: 925−933. | PubMed | ISI | ChemPort |
- Leung, D.W., Cachianes, G., Kuang, W., Goeddel, D.V. and Ferrara, N. 1989. Vascular endothelial growth factor is a secreted angiogenic mitogen. Science 246: 1306−1309. | PubMed | ISI | ChemPort |
- Ullrich, A., Gray, A., Berman, C. and Dull, T. 1983. Human
-nerve growth factor gene sequence highly homologous to that of mouse. Nature 303: 821−825. | PubMed | ISI | ChemPort |
- Derynck, R., Jarrett, J.A., Chen, E.Y., Eaton, D.H., Bell, J.R., Assoian, K.R. et al. 1985. Human transforming growth factor-
complementary DNA sequence and expression in normal and transformed cells. Nature 316: 701−705. | PubMed | ISI | ChemPort |
- McGrath, M.E., Hines, W.M., Sakanari, J.A., Fletterick, R.J. and Craik, C.S. 1991. The sequence and reactive site of Ecotin. J. Biol. Chem. 266: 6620−6625. | PubMed | ISI | ChemPort |
- Kadokura, H., Yoda, K., Watanabe, S., kikuchi, Y., Tamura, G., and Yamasaki, M. 1994. Enhancement of protein secretion by optimizing protein synthesis: Isolation and characterization of Escherichia coli mutants with increased secretion ability of alkaline phosphatase. Appl. Microbiol. Biotechnol. 41: 163−169. | Article | ISI | ChemPort |
- Lee, C.A. and Beckwith, J. 1986. Suppression of growth and protein secretion defects in Escherichia coli secA mutants by decreasing protein synthesis. J. Bacteriol. 166: 878−883. | PubMed | ISI | ChemPort |
- Shiba, K., Ito, K. and Yura, T. 1984. Mutation that suppresses the protein export defect of the secY mutation and causes cold-sensitive growth of Escherichia coli. J. Bacteriol. 160: 696−701. | PubMed | ISI | ChemPort |
- Sutcliffe, J.G. 1978. Complete nucleotide sequence of the Escherichia coli plasmid pBR322. Cold Spring Harbor. Symp. Quant. Biol. 43: 77−90.
- Matsudaira, P. 1987. Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes. J. Biol. Chem. 262: 10035−10038. | PubMed | ISI | ChemPort |
- Henzel, W.J., Grimley, C., Bourell, J.H., Billed, T.M., Wong, S.C. and Stults, J.T. 1994. Analysis of two-dimensional gel proteins by mass spectrometry and microsequencing. Methods: A Companion to Methods Enzymol. 6: 239−247. | Article | ChemPort |
|