Supplementary information
From the following article:
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
Brian J. Haas, Sophien Kamoun, Michael C. Zody, Rays H. Y. Jiang, Robert E. Handsaker, Liliana M. Cano, Manfred Grabherr, Chinnappa D. Kodira, Sylvain Raffaele, Trudy Torto-Alalibo, Tolga O. Bozkurt, Audrey M. V. Ah-Fong, Lucia Alvarado, Vicky L. Anderson, Miles R. Armstrong, Anna Avrova, Laura Baxter, Jim Beynon, Petra C. Boevink, Stephanie R. Bollmann, Jorunn I. B. Bos, Vincent Bulone, Guohong Cai, Cahid Cakir, James C. Carrington, Megan Chawner, Lucio Conti, Stefano Costanzo, Richard Ewan, Noah Fahlgren, Michael A. Fischbach, Johanna Fugelstad, Eleanor M. Gilroy, Sante Gnerre, Pamela J. Green, Laura J. Grenville-Briggs, John Griffith, Niklaus J. Grünwald, Karolyn Horn, Neil R. Horner, Chia-Hui Hu, Edgar Huitema, Dong-Hoon Jeong, Alexandra M. E. Jones, Jonathan D. G. Jones, Richard W. Jones, Elinor K. Karlsson, Sridhara G. Kunjeti, Kurt Lamour, Zhenyu Liu, LiJun Ma, Daniel MacLean, Marcus C. Chibucos, Hayes McDonald, Jessica McWalters, Harold J. G. Meijer, William Morgan, Paul F. Morris, Carol A. Munro, Keith O'Neill, Manuel Ospina-Giraldo, Andrés Pinzón, Leighton Pritchard, Bernard Ramsahoye, Qinghu Ren, Silvia Restrepo, Sourav Roy, Ari Sadanandom, Alon Savidor, Sebastian Schornack, David C. Schwartz, Ulrike D. Schumann, Ben Schwessinger, Lauren Seyer, Ted Sharpe, Cristina Silvar, Jing Song, David J. Studholme, Sean Sykes, Marco Thines, Peter J. I. van de Vondervoort, Vipaporn Phuntumart, Stephan Wawra, Rob Weide, Joe Win, Carolyn Young, Shiguo Zhou, William Fry, Blake C. Meyers, Pieter van West, Jean Ristaino, Francine Govers, Paul R. J. Birch, Stephen C. Whisson, Howard S. Judelson & Chad Nusbaum
Nature 461, 393-398(17 September 2009)
doi:10.1038/nature08358
Supplementary Information
This file contains Supplementary Notes and Supplementary Tables S1, S4-S6, S-A2, S-A3.
Supplementary Figures
This file contains Supplementary Figures S1-S28 with Legends.
Supplementary Table S2
This table contains Orthologous gene clusters for P. infestans, P. ramorum, and P. sojae.
Supplementary Table S3
This table contains P. infestans reference transposable elements.
Supplementary Table S7
This table contains annotation of RXLR effectors in Phytophthora
Supplementary Table S8
This table contains fast evolving RXLR effector families.
Supplementary Table S9
This table contains candidate RXLR pseudogenes identified in the P. infestans genome.
Supplementary Table S10
This table contains Crinkler family gene annotations for Phytophthora species.
Supplementary Table S11
This table contains Crinkler protein domains.
Supplementary Table S12
This table contains genes in P. infestans found differentially expressed during plant infection.
Supplementary Table SA-1
This table contains Descriptions of the libraries used for sequencing of the Phythophthora infestans genome.
Supplementary Table SA-4
This table contains sequences and phenotypes for Crinkler genes assayed for the necrosis phenotype.
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