Supplementary information
From the following article:
The diploid genome sequence of an Asian individual
Jun Wang, Wei Wang, Ruiqiang Li, Yingrui Li, Geng Tian, Laurie Goodman, Wei Fan, Junqing Zhang, Jun Li, Juanbin Zhang, Yiran Guo, Binxiao Feng, Heng Li, Yao Lu, Xiaodong Fang, Huiqing Liang, Zhenglin Du, Dong Li, Yiqing Zhao, Yujie Hu, Zhenzhen Yang, Hancheng Zheng, Ines Hellmann, Michael Inouye, John Pool, Xin Yi, Jing Zhao, Jinjie Duan, Yan Zhou, Junjie Qin, Lijia Ma, Guoqing Li, Zhentao Yang, Guojie Zhang, Bin Yang, Chang Yu, Fang Liang, Wenjie Li, Shaochuan Li, Dawei Li, Peixiang Ni, Jue Ruan, Qibin Li, Hongmei Zhu, Dongyuan Liu, Zhike Lu, Ning Li, Guangwu Guo, Jianguo Zhang, Jia Ye, Lin Fang, Qin Hao, Quan Chen, Yu Liang, Yeyang Su, A. san, Cuo Ping, Shuang Yang, Fang Chen, Li Li, Ke Zhou, Hongkun Zheng, Yuanyuan Ren, Ling Yang, Yang Gao, Guohua Yang, Zhuo Li, Xiaoli Feng, Karsten Kristiansen, Gane Ka-Shu Wong, Rasmus Nielsen, Richard Durbin, Lars Bolund, Xiuqing Zhang, Songgang Li, Huanming Yang & Jian Wang
Nature 456, 60-65(6 November 2008)
doi:10.1038/nature07484
Supplementary Information
This file contains Supplementary Figures S1-S8, with Legends, Supplementary Tables S1, S2, S5 and S7 (See separate files for Supplementary Tables S3, S4, S6 and S8-S11, Supplementary Notes and Consent Forms to participate and donate to The Yanhuang Project-Phase 1.
Supplementary Table S3
Supplementary Table S3 shows a full list of the PCR validation of the SNP sites which are inconsistent between the assembled consensus and genotyping.
Supplementary Table S4
Supplementary Table S4 shows a full list of the PCR validation of the indel sites.
Supplementary Table S6
Supplementary Table S6 shows a list of genes overlapped with SVs.
Supplementary Table S8
Supplementary Table S8 shows a full list of genes containing non-synonymous SNPs.
Supplementary Table S9
Supplementary Table S9 shows a full list of genes containing frameshift indels.
Supplementary Table S10
Supplementary Table S10 shows a full list of genes involved in predicted selective sweeps.
Supplementary Table S11
Supplementary Table S11 shows a list of HGMD alleles which are positive in YH genome.
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