Supplementary information

From the following article:

Polycomb complexes repress developmental regulators in murine embryonic stem cells

Laurie A. Boyer, Kathrin Plath, Julia Zeitlinger, Tobias Brambrink, Lea A. Medeiros, Tong Ihn Lee, Stuart S. Levine, Marius Wernig, Adriana Tajonar, Mridula K. Ray, George W. Bell, Arie P. Otte, Miguel Vidal, David K. Gifford, Richard A. Young & Rudolf Jaenisch

Nature 441, 349-353(18 May 2006)

doi:10.1038/nature04733

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Supplementary Notes

This file contains the Supplementary Methods and Supplementary Discussion; Supplementary Notes; Supplementary Figure Legends 1–9; Supplementary Figures 1–9.

Supplementary Table 1

This file contains chromosomal coordinates for genomic regions bound by Suz12.

Supplementary Table 2

This file contains chromosomal coordinates for genomic regions bound by Eed.

Supplementary Table 3

This file contains chromosomal coordinates for genomic regions bound by Rnf2.

Supplementary Table 4

This file contains chromosomal coordinates for genomic regions bound by Phc1.

Supplementary Table 5

This file contains the assignment of bound genomic regions to annotated transcripts.

Supplementary Table 6

This file contains data from the independent site specific validation used to estimate error rates in location analysis data.

Supplementary Table 7.

This file contains chromosomal coordinates for genomic regions bound by H3K27me3.

Supplementary Table 8

This file contains all enriched gene ontology classifications for bound genes.

Supplementary Table 9

This file contains the complete list of transcription factor genes bound by PcG proteins.

Supplementary Table 10

This file contains all oligo sequences and RT-PCR results in wild-type and eed mutant ES cells used to generate Figure 2 in the main text.

Supplementary Table 11

This file contains the microarray expression data used to analyse the expression of PcG bound genes in ES cells and during ES cell differentiation as displayed in Figure 3 in the main text.

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