Supplementary information
From the following article:
Human chromosome 11 DNA sequence and analysis including novel gene identification
Todd D. Taylor, Hideki Noguchi, Yasushi Totoki, Atsushi Toyoda, Yoko Kuroki, Ken Dewar, Christine Lloyd, Takehiko Itoh, Tadayuki Takeda, Dae-Won Kim, Xinwei She, Karen F. Barlow, Toby Bloom, Elspeth Bruford, Jean L. Chang, Christina A. Cuomo, Evan Eichler, Michael G. FitzGerald, David B. Jaffe, Kurt LaButti, Robert Nicol, Hong-Seog Park, Christopher Seaman, Carrie Sougnez, Xiaoping Yang, Andrew R. Zimmer, Michael C. Zody, Bruce W. Birren, Chad Nusbaum, Asao Fujiyama, Masahira Hattori, Jane Rogers, Eric S. Lander & Yoshiyuki Sakaki
Nature 440, 497-500(23 March 2006)
doi:10.1038/nature04632
Supplementary Figure 1
Chromosome 11 recombination rate versus sequence-based physical distance.
Supplementary Figure 2
Gene and disorder distributions across the human genome.
Supplementary Figure 3
Figure S3: Sequence similarity and aligned bases of segmental duplications.
Supplementary Figure 4
Divergence of chromosome 11 segmental duplications.
Supplementary Figure 5
Pattern of chromosome 11 segmental duplications.
Supplementary Figure 6
Distribution of segmental duplications.
Supplementary Figure 7
Sequence identity of segmental duplications on chromosome 11.
Supplementary Figure 8
Multi-species comparative genome analysis for chromosome 11.
Supplementary Figure 9
Distribution of conserved non-coding regions along human chromosome 11.
Supplementary Figure 10
Segmentally duplicated region that was challenging to finish.
Supplementary Table 1
Minimum clone tiling path of human chromosome 11.
Supplementary Table 2
Physical/clone libraries screened during map construction.
Supplementary Table 3
Supplementary Table 3 nature04632-s13.xls Finished contigs and gaps on human chromosome 11.
Supplementary Table 4
Sequence quality information for RIKEN and WUGSC chromosome 11 clones.
Supplementary Table 5
Interspersed repetitive elements.
Supplementary Table 6
Gene catalog of human chromosome 11.
Supplementary Table 7
Non-OR clustered gene families on human chromosome 11.
Supplementary Table 8
Read-through transcripts found on human chromosome 11.
Supplementary Table 9
CpG islands versus number of variants in expressed genes.
Supplementary Table 10
Olfactory receptor gene clusters on chromosome 11.
Supplementary Table 11
Predicted CpG islands on human chromosome 11.
Supplementary Table 12
Gene expression analysis results for DIGIT predicted genes.
Supplementary Table 13
Table S13: Accession numbers for submitted DIGIT mRNA sequences.
Supplementary Table 14
Blast results for DIGIT genes versus the NCBI nt database.
Supplementary Table 15
InterProScan analysis of DIGIT verified genes.
Supplementary Table 16
OMIM disorders that have been associated with human chromosome 11 but for which no specific cause has yet been determined.
Supplementary Table 17
Gene deserts on human chromosome 11.
Supplementary Table 18
Imprinted genes on human chromosome 11.
Supplementary Table 19
Bases involved in segmental duplication and pairwise alignment.
Supplementary Table 20
Segmental duplication positions on human chromosome 11.
Supplementary Table 21
Segmental duplication in pericentromeric and telomeric regions.
Supplementary Table 22
RefSeq genes overlapped with segmental duplication.
Supplementary Table 23
Conservation blocks and segments between chromosome 11 and other genomes.
Supplementary Table 24
Conserved non-coding elements on human chromosome 11.
Supplementary Table 25
Sequencing gaps on human chromosome 11.
Supplementary Notes
This file contains Supplementary Methods and additional references
Supplementary Figure Legends
This file contains text to accompany the Supplementary Figures
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