Supplementary information

From the following article:

Adaptive evolution of non-coding DNA in Drosophila

Peter Andolfatto

Nature 437, 1149-1152(20 October 2005)

doi:10.1038/nature04107

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Supplementary Notes S1

Regions surveyed in this study.

Supplementary Notes S2

Assumptions of the McDonald-Kreitman test.

Supplementary Notes S3

Estimates and confidence limits of alpha and 2Nes.

Supplementary Notes S4

Estimating the rate of adaptation.

Supplementary Notes S5

Adjacent base contexts and rates of divergence.

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