FIGURE 1. Chimpanzee segmental duplication detection on human genome assembly NCBI-34 (build 34).
From the following article:
A genome-wide comparison of recent chimpanzee and human segmental duplications
Ze Cheng, Mario Ventura, Xinwei She, Philipp Khaitovich, Tina Graves, Kazutoyo Osoegawa, Deanna Church, Pieter DeJong, Richard K. Wilson, Svante Pääbo, Mariano Rocchi & Evan E. Eichler
Nature 437, 88-93(1 September 2005)
doi:10.1038/nature04000
a, Correlation of copy number and whole-genome shotgun sequence read coverage (R2 = 0.953) is shown based on analysis of unique and duplicated chimpanzee loci of known copy number (Supplementary Table S1). b–d, Three examples of chimpanzee-only duplications are depicted based on comparison of the four duplication analyses (human WGAC, dark blue; human WSSD, black; chimpanzee WGAC, purple; chimpanzee WSSD, light blue). Significant departures (3 s.d.) in the depth-of-coverage of chimpanzee reads (5-kb windows) are shown below the tracks (red). Red dots indicate the position of 'triallelic' variants (Supplementary Methods).