Abstract
Prions are believed to be infectious, self-propagating polymers of otherwise soluble, host-encoded proteins1,2. This concept is now strongly supported by the recent findings that amyloid fibrils of recombinant prion proteins from yeast3,4,5, Podospora anserina6 and mammals7 can induce prion phenotypes in the corresponding hosts. However, the structural basis of prion infectivity remains largely elusive because acquisition of atomic resolution structural properties of amyloid fibrils represents a largely unsolved technical challenge. HET-s, the prion protein of P. anserina, contains a carboxy-terminal prion domain comprising residues 218–289. Amyloid fibrils of HET-s(218–289) are necessary and sufficient for the induction and propagation of prion infectivity6. Here, we have used fluorescence studies, quenched hydrogen exchange NMR and solid-state NMR to determine the sequence-specific positions of amyloid fibril secondary structure elements of HET-s(218–289). This approach revealed four β-strands constituted by two pseudo-repeat sequences, each forming a β-strand-turn-β-strand motif. By using a structure-based mutagenesis approach, we show that this conformation is the functional and infectious entity of the HET-s prion. These results correlate distinct structural elements with prion infectivity.
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References
Alper, T., Cramp, W. A., Haig, D. A. & Clarke, M. C. Does the agent of scrapie replicate without nucleic acid? Nature 214, 764–766 (1967)
Prusiner, S. B. Novel proteinaceous infectious particles cause scrapie. Science 216, 136–144 (1982)
Sparrer, H. E., Santoso, A., Szoka, F. C. Jr & Weissman, J. S. Evidence for the prion hypothesis: induction of the yeast [PSI + ] factor by in vitro-converted Sup35 protein. Science 289, 595–599 (2000)
King, C. Y. & Diaz-Avalos, R. Protein-only transmission of three yeast prion strains. Nature 428, 319–323 (2004)
Tanaka, M., Chien, P., Naber, N., Cooke, R. & Weissman, J. S. Conformational variations in an infectious protein determine prion strain differences. Nature 428, 323–328 (2004)
Maddelein, M. L., Dos Reis, S., Duvezin-Caubet, S., Coulary-Salin, B. & Saupe, S. J. Amyloid aggregates of the HET-s prion protein are infectious. Proc. Natl Acad. Sci. USA 99, 7402–7407 (2002)
Legname, G. et al. Synthetic mammalian prions. Science 305, 673–676 (2004)
Glass, N. L. & Kaneko, I. Fatal attraction: nonself recognition and heterokaryon incompatibility in filamentous fungi. Eukaryot. Cell 2, 1–8 (2003)
Saupe, S. J. Molecular genetics of heterokaryon incompatibility in filamentous ascomycetes. Microbiol. Mol. Biol. Rev. 64, 489–502 (2000)
Turcq, B., Deleu, C., Denayrolles, M. & Begueret, J. Two allelic genes responsible for vegetative incompatibility in the fungus Podospora anserina are not essential for cell viability. Mol. Gen. Genet. 228, 265–269 (1991)
Coustou, V., Deleu, C., Saupe, S. & Begueret, J. The protein product of the het-s heterokaryon incompatibility gene of the fungus Podospora anserina behaves as a prion analog. Proc. Natl Acad. Sci. USA 94, 9773–9778 (1997)
Dos Reis, S. et al. The HET-s prion protein of the filamentous fungus Podospora anserina aggregates in vitro into amyloid-like fibrils. J. Biol. Chem. 277, 5703–5706 (2002)
Balguerie, A. et al. Domain organization and structure-function relationship of the HET-s prion protein of Podospora anserina. EMBO J. 22, 2071–2081 (2003)
Coustou-Linares, V., Maddelein, M. L., Begueret, J. & Saupe, S. J. In vivo aggregation of the HET-s prion protein of the fungus Podospora anserina. Mol. Microbiol. 42, 1325–1335 (2001)
Balguerie, A. et al. The sequences appended to the amyloid core region of the HET-s prion protein determine higher-order aggregate organization in vivo. J. Cell Sci. 117, 2599–2610 (2004)
Hoshino, M. et al. Mapping the core of the β2-microglobulin amyloid fibril by H/D exchange. Nature Struct. Biol. 9, 332–336 (2002)
Lührs, T. et al. The 3D structure of Alzheimer's Aβ(1–42) fibrils. Nature (submitted)
Verel, R., Ernst, M. & Meier, B. H. Adiabatic dipolar recoupling in solid-state NMR: The DREAM scheme. J. Magn. Reson. 150, 81–99 (2001)
Siemer, A. B., Ritter, C., Ernst, M., Riek, R. & Meier, B. H. High-resolution solid-state NMR of the prion protein HET-s in its amyloid conformation. Angew. Chem. Int. Edn Engl. 44, 2441–2444 (2005)
Wishart, D. S. & Sykes, B. D. The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data. J. Biomol. NMR 4, 171–180 (1994)
Javitch, J. A., Shi, L. & Liapakis, G. Use of the substituted cysteine accessibility method to study the structure and function of G protein-coupled receptors. Methods Enzymol. 343, 137–156 (2002)
Tycko, R. Progress towards a molecular-level structural understanding of amyloid fibrils. Curr. Opin. Struct. Biol. 14, 96–103 (2004)
Petkova, A. T. et al. Self-propagating, molecular-level polymorphism in Alzheimer's β-amyloid fibrils. Science 307, 262–265 (2005)
Laws, D. D. et al. Solid-state NMR studies of the secondary structure of a mutant prion protein fragment of 55 residues that induces neurodegeneration. Proc. Natl Acad. Sci. USA 98, 11686–11690 (2001)
Yamaguchi, K. et al. Core and heterogeneity of β2-microglobulin amyloid fibrils as revealed by H/D exchange. J. Mol. Biol. 338, 559–571 (2004)
Harper, J. D. & Lansbury, P. T. Jr Models of amyloid seeding in Alzheimer's disease and scrapie: mechanistic truths and physiological consequences of the time-dependent solubility of amyloid proteins. Annu. Rev. Biochem. 66, 385–407 (1997)
Grzesiek, S. et al. 1H, 13C, and 15N NMR backbone assignments and secondary structure of human interferon-γ. Biochemistry 31, 8180–8190 (1992)
Bracken, C., Palmer, A. G. III & Cavanagh, J. (H)N(COCA)NH and HN(COCA)NH experiments for 1H–15N backbone assignments in 13C/15N-labeled proteins. J. Biomol. NMR 9, 94–100 (1997)
Guntert, P., Dotsch, V., Wider, G. & Wuthrich, K. Processing of multidimensional NMR data with the new software Prosa. J. Biomol. NMR 2, 619–629 (1992)
Samoson, A., Tuherm, T. & Past, J. Rotation sweep NMR. Chem. Phys. Lett. 365, 292–299 (2002)
Acknowledgements
R.R. is a Pew scholar. This research was supported in part by grants from the National Institute of Health, the US Army, the ETH Zurich, the Swiss National Science Foundation, the CNRS and the French Ministry of Research.
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Supplementary Notes
Contains Supplementary Figures S1-S5 (additional solid and liquid state NMR data, sequence alignments and EM pictures), legends to accompany the figures and Supplementary Tables S1 and S2 giving details of the HET-s infectivity and function assays. (PDF 2848 kb)
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Ritter, C., Maddelein, ML., Siemer, A. et al. Correlation of structural elements and infectivity of the HET-s prion. Nature 435, 844–848 (2005). https://doi.org/10.1038/nature03793
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DOI: https://doi.org/10.1038/nature03793
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