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FIGURE 3. Structural analysis of the I state of mutants G48M and G48V of Fyn SH3 using chemical shifts.

From the following article:

Low-populated folding intermediates of Fyn SH3 characterized by relaxation dispersion NMR

Dmitry M. Korzhnev, Xavier Salvatella, Michele Vendruscolo, Ariel A. Di Nardo, Alan R. Davidson, Christopher M. Dobson and Lewis E. Kay

Nature 430, 586-590(29 July 2004)

doi:10.1038/nature02655

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a, Ratio of 15N chemical-shift differences, |Deltaexp(k)| = |deltaFI(k)/deltaFU(k)|, plotted on the ribbon trace of the structure of the wild-type Fyn SH3 domain27, with the colour code indicated. Residues with values of Deltaexp < -0.5 or Deltaexp > 2.5 are in grey. b, Comparison of Deltaexp (filled squares) with the Deltacalc values obtained in the structure determinations (lines); only residues with more than four native contacts have been represented. c, Ribbon representation of the ensemble of 25 structures determined for each mutant; the structure with the thicker ribbon is the more representative (lowest average pairwise r.m.s.d.) of the ensemble. d, Average effective energy contact map of the native state (bottom) and the ensembles obtained for the I state of each mutant (top); Eij is the interaction energy (in kcal mol-1) between the side chains of residues i and j according to the CHARMM19 force field. Residue numbers are indicated along each of the axes.

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