YAL015C_YOL043Cp.dnd YAL015C - NTG1 - [] - DNA glycosylase YOL043C - NTG2 - [] - Endonuclease III-like glycosylase +----------------------------------------------------(C=0.263) Kwal +------------------------------------------------(D1=0.243)+--------------------(E1=0.104) Scer1 + +---------------------(F1=0.107) Sbay1 +--------------------------------------(D2=0.193)+------------------(E2=0.093) Scer2 + +----------------(F2=0.081) Sbay2 YAL023C_YOR321Wp.dnd YAL023C - PMT2 - [] - dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase YOR321W - PMT3 - [] - dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase +---------------------(D1=0.109)+-------------------------(C=0.126) Kwal + +-------------------------------(D2=0.156)+--------------(E2=0.071) Scer2 + + +---------------(F2=0.076) Sbay2 +-------(E1=0.039) Scer1 +--------(F1=0.044) Sbay1 YAL037W_YOR342Cp.dnd YAL037W - - [] - Hypothetical ORF YOR342C - - [] - Hypothetical ORF +-------------------------------------------(D1=0.220)+---------------------------------------------------------------------------(C=0.377) Kwal + +--------------------------------------------------------------(D2=0.315)+----------------(E2=0.081) Scer2 + + +--------------------(F2=0.103) Sbay2 +---------------------------------------(E1=0.199) Scer1 +----------------------------------(F1=0.171) Sbay1 YAL038W_YOR347Cp.dnd YAL038W - CDC19 - [] - Pyruvate kinase YOR347C - PYK2 - [] - pyruvate kinase +-----------(D1=0.059)+--------------(C=0.070) Kwal + +----------------------------------(D2=0.175)+---------(E2=0.049) Scer2 + + +--------(F2=0.043) Sbay2 +-(E1=0.008) Scer1 +---(F1=0.020) Sbay1 YAL051W_YOR363Cp.dnd YAL051W - OAF1 - [] - transcription factor YOR363C - PIP2 - [] - activator of peroxisome proliferation +-------------------------------------------(D2=0.219)+----------------------------------------------------------------------------------------(C=0.442) Kwal + +-----------------------------------------------(D1=0.237)+--------------(E1=0.074) Scer1 + + +------------(F1=0.061) Sbay1 +---------------(E2=0.077) Scer2 +----------------(F2=0.081) Sbay2 YAL053W_YOR365Cp.dnd YAL053W - - [] - Hypothetical ORF YOR365C - - [] - Hypothetical ORF +------------------------------(D1=0.154)+----------------------------------------------(C=0.233) Kwal + +--------------------------------------------------(D2=0.255)+------------------------(E2=0.120) Scer2 + + +---------------------(F2=0.106) Sbay2 +--------(E1=0.042) Scer1 +--------(F1=0.041) Sbay1 YAL056W_YOR371Cp.dnd YAL056W - KRH1 - [] - Hypothetical ORF YOR371C - KRH2 - [] - Hypothetical ORF +--------------------------------------------(D1=0.222)+-----------------------------------------------------------------------(C=0.356) Kwal + +---------------------------------------------(D2=0.226)+---------------------(E2=0.107) Scer2 + + +-------------------(F2=0.097) Sbay2 +-----------------------(E1=0.119) Scer1 +------------------------(F1=0.122) Sbay1 YAL062W_YOR375Cp.dnd YAL062W - GDH3 - [] - NADP-linked glutamate dehydrogenase YOR375C - GDH1 - [] - NADP-specific glutamate dehydrogenase +-----(D2=0.029)+-----------------------------(C=0.145) Kwal + +---------(D1=0.048)+------(E1=0.031) Scer1 + + +--------(F1=0.041) Sbay1 +----(E2=0.024) Scer2 +----(F2=0.025) Sbay2 YAR002C-A_YGL002Wp.dnd YAR002C-A - ERP1 - [] - p24 protein involved in membrane trafficking YGL002W - ERP6 - [] - p24 protein involved in membrane trafficking +-------------------------------------------------------(C=0.279) Kwal +---------------------------(D1=0.139)+----------(E1=0.054) Scer1 + +----------(F1=0.051) Sbay1 +-------------------------------------(D2=0.188)+-------------(E2=0.069) Scer2 + +---------(F2=0.046) Sbay2 YBL005W_YGL013Cp.dnd YBL005W - PDR3 - [] - Pleiotropic drug resistance protein 3 YGL013C - PDR1 - [] - zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type +-----------------------------------------(D1=0.208)+----------------------------------------------------------------------------------(C=0.411) Kwal + +--------------------------------------------(D2=0.222)+--------------------(E2=0.105) Scer2 + + +----------------------(F2=0.114) Sbay2 +---------------------------(E1=0.136) Scer1 +--------------------------(F1=0.131) Sbay1 YBL030C_YBR085Wp.dnd YBL030C - PET9 - [] - mitochondrial ADP/ATP translocator YBR085W - AAC3 - [] - mitochondrial ADP/ATP translocator +---------------(C=0.079) Kwal +-(D1=0.008)+-----(E1=0.026) Scer1 + +------(F1=0.030) Sbay1 +-----------(D2=0.058)+-----(E2=0.026) Scer2 + +------(F2=0.033) Sbay2 YBL039C_YJR103Wp.dnd YBL039C - URA7 - [] - CTP synthase, highly homologus to URA8 CTP synthase YJR103W - URA8 - [] - CTP synthase +-------------(D2=0.069)+------------------------(C=0.122) Kwal + +--------------(D1=0.071)+-----(E1=0.029) Scer1 + + +-----(F1=0.026) Sbay1 +-------(E2=0.039) Scer2 +---------(F2=0.046) Sbay2 YBL054W_YER088Cp.dnd YBL054W - - [] - Hypothetical ORF YER088C - DOT6 - [] - nuclear protein with Myb domain involved in telomeric silencing +----------------------------------------------------------------------------(C=0.381) Kwal +------------------------------------------------------(D1=0.271)+-------------------(E1=0.099) Scer1 + +---------------------(F1=0.107) Sbay1 +---------------------------------------(D2=0.197)+----------------------------(E2=0.144) Scer2 + +-----------------------(F2=0.118) Sbay2 YBL056W_YER089Cp.dnd YBL056W - PTC3 - [] - protein phosphatase type 2C YER089C - PTC2 - [] - Protein phosphatase type 2C +--------------------------(D2=0.132)+-----------------------------------------(C=0.209) Kwal + +---------------------------------(D1=0.168)+--------(E1=0.044) Scer1 + + +--------(F1=0.042) Sbay1 +-------------(E2=0.069) Scer2 +------------------(F2=0.091) Sbay2 YBL061C_YER096Wp.dnd YBL061C - SKT5 - [] - Probable Ca++ binding membrane protein (prenylated) YER096W - SHC1 - [] - sporulation-specific homolog of csd4 +----------------------(D1=0.111)+-----------------------------------------------(C=0.238) Kwal + +---------------------------------------------------------(D2=0.286)+--------------------------------(E2=0.160) Scer2 + + +----------------------------------(F2=0.174) Sbay2 +-----------------------(E1=0.118) Scer1 +------------------------(F1=0.122) Sbay1 YBL067C_YER098Wp.dnd YBL067C - UBP13 - [] - ubiquitin carboxyl-terminal hydrolase YER098W - UBP9 - [] - ubiquitin carboxyl-terminal hydrolase +--------------------------(D2=0.131)+------------------------------------------------------------(C=0.301) Kwal + +------------------------------------(D1=0.181)+-----------------------(E1=0.116) Scer1 + + +----------------------(F1=0.114) Sbay1 +--------------------------(E2=0.133) Scer2 +--------------------------(F2=0.134) Sbay2 YBL068W_YER099Cp.dnd YBL068W - PRS4 - [] - ribose-phosphate pyrophosphokinase 4 YER099C - PRS2 - [] - ribose-phosphate pyrophosphokinase 2 +----(D2=0.023)+-----------------(C=0.089) Kwal + +----------(D1=0.052)+---(E1=0.018) Scer1 + + +---(F1=0.016) Sbay1 +---(E2=0.018) Scer2 +----(F2=0.023) Sbay2 YBL069W_YER101Cp.dnd YBL069W - AST1 - [] - involved in targeting of plasma membrane [H+]ATPase YER101C - AST2 - [] - involved in targeting of plasma membrane [H+]ATPase +--------------------------------------------------------------(C=0.314) Kwal +----------------------(D1=0.115)+--------(E1=0.044) Scer1 + +-----------(F1=0.056) Sbay1 +-------------------(D2=0.095)+----------(E2=0.053) Scer2 + +-------------(F2=0.070) Sbay2 YBL072C_YER102Wp.dnd conversion topology probable. Skipped YBL072C_YER102Wp.dnd YBL072C - RPS8A - [] - Ribosomal protein S8A (S14A) (rp19) (YS9) YER102W - RPS8B - [] - Ribosomal protein S8B (S14B) (rp19) (YS9) +--------------------------(C=0.133) Kwal +--(?=0.013)+(E1=0.000) Scer1 + +(E2=0.000) Scer2 +---(?=0.018)+(F1=0.000) Sbay1 + +(F2=0.000) Sbay2 YBL075C_YER103Wp.dnd YBL075C - SSA3 - [] - heat-inducible cytosolic member of the 70 kDa heat shock protein family YER103W - SSA4 - [] - member of 70 kDa heat shock protein family +----------------(C=0.082) Kwal +--------(D1=0.042)+---(E1=0.017) Scer1 + +---(F1=0.019) Sbay1 +------(D2=0.031)+-----(E2=0.028) Scer2 + +----(F2=0.020) Sbay2 YBL089W_YER119Cp.dnd YBL089W - - [] - Hypothetical ORF YER119C - - [] - Hypothetical ORF +--------------------------(D2=0.134)+--------------------------------------------(C=0.222) Kwal + +----------------------------------(D1=0.170)+-------------------(E1=0.096) Scer1 + + +----------------(F1=0.082) Sbay1 +-------------(E2=0.065) Scer2 +---------------(F2=0.076) Sbay2 YBL101C_YPR030Wp.dnd YBL101C - ECM21 - [] - involved in cell wall biogenesis YPR030W - CSR2 - [] - chs5 spa2 rescue; overexpression rescues the lethality of chs5 spa2 at 37 degrees +---------------------------------------------------------------(C=0.319) Kwal +------------------------------------------(D1=0.212)+------------------(E1=0.092) Scer1 + +-----------------(F1=0.088) Sbay1 +-----------------------------------------------(D2=0.238)+------------------------------(E2=0.153) Scer2 + +-------------------------------(F2=0.159) Sbay2 YBL106C_YPR032Wp.dnd YBL106C - SRO77 - [] - yeast homolog of the Drosphila tumor suppressor, lethal giant larvae YPR032W - SRO7 - [] - yeast homolog of the Drosphila tumor suppressor, lethal giant larvae +--------------------------------------------------(C=0.252) Kwal +--------------------------(D1=0.131)+------------------(E1=0.092) Scer1 + +---------------(F1=0.080) Sbay1 +--------------------------------(D2=0.162)+---------------(E2=0.079) Scer2 + +-----------------(F2=0.089) Sbay2 YBR001C_YDR001Cp.dnd YBR001C - NTH2 - [] - Neutral trehalase, highly homologous to Nth1p YDR001C - NTH1 - [] - neutral trehalase +----------------(D1=0.081)+-----------------------------------(C=0.178) Kwal + +-----------------(D2=0.089)+----(E2=0.021) Scer2 + + +-----(F2=0.027) Sbay2 +----------(E1=0.051) Scer1 +----------(F1=0.053) Sbay1 YBR005W_YDR003Wp.dnd YBR005W - - [] - Hypothetical ORF YDR003W - - [] - Hypothetical ORF +--------------------------(D1=0.134)+-----------------------------------------------------------------------------------(C=0.417) Kwal + +-----------------------------(D2=0.148)+-------------------(E2=0.095) Scer2 + + +----------------------(F2=0.114) Sbay2 +-------------------------------------(E1=0.189) Scer1 +-----------------------(F1=0.116) Sbay1 YBR014C_YDL010Wp.dnd YBR014C - - [] - Hypothetical ORF YDL010W - - [] - Hypothetical ORF +-------------------------------(D2=0.159)+-------------------------------------------------------(C=0.279) Kwal + +--------------------------------(D1=0.163)+-----------------------------------(E1=0.179) Scer1 + + +------------------------------(F1=0.151) Sbay1 +--------------------(E2=0.102) Scer2 +-----------------------(F2=0.119) Sbay2 YBR042C_YDR018Cp.dnd YBR042C - - [] - Hypothetical ORF YDR018C - - [] - Hypothetical ORF +-------------------------------(D1=0.157)+---------------------------------------------------(C=0.258) Kwal + +----------------------------------------------------------(D2=0.290)+---------------------(E2=0.106) Scer2 + + +-----------------------------(F2=0.150) Sbay2 +---------------(E1=0.078) Scer1 +------------------(F1=0.091) Sbay1 YBR052C_YDR032Cp.dnd YBR052C - - [] - Hypothetical ORF YDR032C - PST2 - [] - Protoplasts-SecreTed protein; the gene product was detected among the proteins secreted by regenerating protoplasts +--------------------------(C=0.132) Kwal +----------------------------------------------------------(D1=0.293)+-------------(E1=0.068) Scer1 + +----------------(F1=0.085) Sbay1 +--------------(D2=0.073)+--(E2=0.014) Scer2 + +-(F2=0.006) Sbay2 YBR066C_YDR043Cp.dnd YBR066C - NRG2 - [] - homologue of NRG1 YDR043C - NRG1 - [] - transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p +----------------------------------------------------------------------------(C=0.381) Kwal +---------------------------------------------(D1=0.226)+-------------------(E1=0.097) Scer1 + +----------------(F1=0.085) Sbay1 +-------------------------------------------------(D2=0.249)+----------------(E2=0.084) Scer2 + +----------(F2=0.055) Sbay2 YBR089C-A_YPR052Cp.dnd YBR089C-A - NHP6B - [] - 11-kDa nonhistone chromosomal protein YPR052C - NHP6A - [] - 11-kDa nonhistone chromosomal protein +----------(D1=0.053)+-----------------(C=0.089) Kwal + +-----------(D2=0.056)+--(E2=0.013) Scer2 + + +-(F2=0.009) Sbay2 +----(E1=0.025) Scer1 +-------(F1=0.036) Sbay1 YBR104W_YPR058Wp.dnd YBR104W - YMC2 - [] - mitochondrial carrier protein YPR058W - YMC1 - [] - putative mitochondrial carrier protein +-----------(D2=0.058)+------------------------------(C=0.151) Kwal + +-------------------------------(D1=0.160)+-------(E1=0.039) Scer1 + + +-------(F1=0.037) Sbay1 +---------(E2=0.050) Scer2 +--------(F2=0.045) Sbay2 YBR117C_YPR074Cp.dnd YBR117C - TKL2 - [] - transketolase, homologous to tkl1 YPR074C - TKL1 - [] - Transketolase 1 +---------------------(C=0.105) Kwal +------------------------------(D1=0.152)+------(E1=0.032) Scer1 + +------(F1=0.033) Sbay1 +------------------(D2=0.091)+---(E2=0.015) Scer2 + +---(F2=0.015) Sbay2 YBR118W_YPR080Wp.dnd conversion topology probable. Skipped YBR118W_YPR080Wp.dnd YBR118W - TEF2 - [] - translational elongation factor EF-1 alpha YPR080W - TEF1 - [] - translational elongation factor EF-1 alpha +-------------(C=0.067) Kwal +-(?=0.008)+(E1=0.000) Scer1 + +(E2=0.000) Scer2 +---(?=0.019)+(F1=0.000) Sbay1 + +(F2=0.000) Sbay2 YBR145W_YOL086Cp.dnd YBR145W - ADH5 - [] - alcohol dehydrogenase isoenzyme V YOL086C - ADH1 - [] - Alcohol dehydrogenase +-------------------(C=0.095) Kwal +-----------------------(D1=0.118)+-----------(E1=0.056) Scer1 + +--------(F1=0.041) Sbay1 +-----(D2=0.027)+-----(E2=0.025) Scer2 + +----(F2=0.023) Sbay2 YBR147W_YOL092Wp.dnd YBR147W - - [] - Hypothetical ORF YOL092W - - [] - Hypothetical ORF +--------------------------(D1=0.130)+--------------------------------------(C=0.195) Kwal + +--------------------------(D2=0.135)+----------(E2=0.054) Scer2 + + +------------(F2=0.060) Sbay2 +-----------------(E1=0.086) Scer1 +-----------------(F1=0.089) Sbay1 YBR169C_YPL106Cp.dnd YBR169C - SSE2 - [] - HSP70 family member, highly homologous to Sse1p YPL106C - SSE1 - [] - HSP70 family member, highly homologous to Ssa1p and Sse2p +-----------(D2=0.056)+---------------------(C=0.107) Kwal + +------------------(D1=0.090)+-------------(E1=0.066) Scer1 + + +---------(F1=0.048) Sbay1 +------(E2=0.031) Scer2 +-------(F2=0.036) Sbay2 YBR172C_YPL105Cp.dnd YBR172C - SMY2 - [] - Kinesin-related protein suppressing myosin defects (MYO2) YPL105C - - [] - Hypothetical ORF +-----------------------------------(D2=0.177)+--------------------------------------------------------------------(C=0.341) Kwal + +--------------------------------------------(D1=0.224)+-------------------------------(E1=0.158) Scer1 + + +--------------------------(F1=0.135) Sbay1 +-------------------------------(E2=0.159) Scer2 +------------------------------(F2=0.153) Sbay2 YBR177C_YPL095Cp.dnd YBR177C - EHT1 - [] - alcohol acyl transferase YPL095C - - [] - Hypothetical ORF +---------------------(D1=0.105)+--------------------------------------------(C=0.224) Kwal + +--------------------------------(D2=0.163)+---------------(E2=0.079) Scer2 + + +---------------------(F2=0.107) Sbay2 +--------------(E1=0.074) Scer1 +---------------(F1=0.077) Sbay1 YBR183W_YPL087Wp.dnd YBR183W - YPC1 - [] - alkaline ceramidase with reverse activity YPL087W - YDC1 - [] - alkaline dihydroceramidase with minor reverse activity. +---------------------------------(D1=0.170)+-------------------------------------------------(C=0.249) Kwal + +--------------------------------------(D2=0.191)+---------(E2=0.046) Scer2 + + +---------(F2=0.045) Sbay2 +-------------(E1=0.066) Scer1 +--------(F1=0.045) Sbay1 YBR197C_YPL077Cp.dnd YBR197C - - [] - Hypothetical ORF YPL077C - - [] - Hypothetical ORF +---------------------------------------(D1=0.197)+--------------------------------------------------------------------------(C=0.371) Kwal + +------------------------------------------------------------------(D2=0.332)+-----------(E2=0.059) Scer2 + + +-------------(F2=0.066) Sbay2 +---------------------------------------(E1=0.196) Scer1 +----------------------------------------------(F1=0.233) Sbay1 YBR210W_YGL054Cp.dnd YBR210W - - [] - Hypothetical ORF YGL054C - ERV14 - [] - 14 KDa protein found on ER-derived vesicles +-------------(D2=0.068)+---------------(C=0.077) Kwal + +--------------------------------------------------(D1=0.253)+-------------(E1=0.065) Scer1 + + +-------------------(F1=0.097) Sbay1 +--(E2=0.014) Scer2 +----(F2=0.022) Sbay2 YBR214W_YGL056Cp.dnd YBR214W - SDS24 - [] - nuclear protein similar to pombe sds23 YGL056C - SDS23 - [] - similar to S. pombe sds23 +--------------------------(D1=0.130)+----------------------(C=0.110) Kwal + +----------------------------------(D2=0.174)+---------(E2=0.048) Scer2 + + +------------------(F2=0.091) Sbay2 +------(E1=0.031) Scer1 +---------(F1=0.045) Sbay1 YBR216C_YGL060Wp.dnd YBR216C - - [] - Hypothetical ORF YGL060W - - [] - Hypothetical ORF +----------------------------------------------------------------(C=0.323) Kwal +-----------------------------------------(D1=0.209)+--------------------------(E1=0.134) Scer1 + +---------------------------(F1=0.136) Sbay1 +-----------------------------(D2=0.146)+----------------------------------(E2=0.174) Scer2 + +----------------------------------(F2=0.174) Sbay2 YBR218C_YGL062Wp.dnd YBR218C - PYC2 - [] - pyruvate carboxylase YGL062W - PYC1 - [] - pyruvate carboxylase +----(D2=0.023)+------------------(C=0.092) Kwal + +----(D1=0.024)+---(E1=0.016) Scer1 + + +------(F1=0.031) Sbay1 +---(E2=0.017) Scer2 +----(F2=0.022) Sbay2 YBR241C_YGL104Cp.dnd YBR241C - - [] - Hypothetical ORF YGL104C - VPS73 - [] - +----------------------------------------------------(C=0.263) Kwal +-------------------------------(D1=0.157)+------------(E1=0.061) Scer1 + +-------------(F1=0.069) Sbay1 +-------------------------------------------------(D2=0.250)+-------------(E2=0.066) Scer2 + +------------(F2=0.063) Sbay2 YBR242W_YGL101Wp.dnd YBR242W - - [] - Hypothetical ORF YGL101W - - [] - Hypothetical ORF +--------------------(D1=0.100)+------------------------------------------(C=0.213) Kwal + +-----------------------(D2=0.120)+------------(E2=0.064) Scer2 + + +------------(F2=0.062) Sbay2 +------------------(E1=0.094) Scer1 +-----------------(F1=0.087) Sbay1 YBR270C_YJL058Cp.dnd YBR270C - - [] - Hypothetical ORF YJL058C - - [] - Hypothetical ORF +-----------------------------------(D1=0.176)+-----------------------------------------------------------------(C=0.326) Kwal + +-------------------------------------------(D2=0.218)+-------------------(E2=0.100) Scer2 + + +---------------------(F2=0.107) Sbay2 +-----------------(E1=0.089) Scer1 +-----------------(F1=0.089) Sbay1 YBR273C_YJL048Cp.dnd YBR273C - - [] - Hypothetical ORF YJL048C - - [] - Hypothetical ORF +--------------------------------------------------------------(C=0.311) Kwal +-------------------------------------(D1=0.186)+------------------(E1=0.095) Scer1 + +-------------------------------------(F1=0.188) Sbay1 +------------------------------------------------------------------------(D2=0.361)+-------------------------(E2=0.127) Scer2 + +-------------------(F2=0.095) Sbay2 YBR278W_YJL065Cp.dnd YBR278W - DPB3 - [] - C and C' subunits of DNA polymerase II YJL065C - - [] - Hypothetical ORF +-------------------------------------------(D2=0.217)+--------------------------------------------------------------(C=0.311) Kwal + +-------------------------------------------------(D1=0.245)+--------------------------------(E1=0.162) Scer1 + + +----------------------------(F1=0.142) Sbay1 +---------------------(E2=0.109) Scer2 +---------------------------(F2=0.138) Sbay2 YBR284W_YJL070Cp.dnd YBR284W - - [] - Hypothetical ORF YJL070C - - [] - Hypothetical ORF +-------------------------------------(D2=0.187)+---------------------------------------------------------(C=0.285) Kwal + +----------------------------------------(D1=0.201)+---------------------------(E1=0.136) Scer1 + + +-------------------------(F1=0.127) Sbay1 +--------------(E2=0.074) Scer2 +---------------(F2=0.077) Sbay2 YBR294W_YLR092Wp.dnd YBR294W - SUL1 - [] - Probable sulfate transport protein YLR092W - SUL2 - [] - high affinity sulfate permease +------------------------------------------------(C=0.245) Kwal +----------------------(D1=0.115)+---------------(E1=0.076) Scer1 + +---------------(F1=0.075) Sbay1 +-----------------------(D2=0.117)+------------(E2=0.062) Scer2 + +-------------(F2=0.066) Sbay2 YCL011C_YNL004Wp.dnd YCL011C - GBP2 - [] - Protein with RNA recognition motifs YNL004W - HRB1 - [] - hypothetical RNA-binding protein +----------------------------------------------------(C=0.261) Kwal +-------------------------------------------(D1=0.218)+--------(E1=0.043) Scer1 + +---------(F1=0.046) Sbay1 +----------------------------------------(D2=0.202)+------------------(E2=0.091) Scer2 + +----------------(F2=0.084) Sbay2 YCL024W_YDR507Cp.dnd YCL024W - KCC4 - [] - protein kinase related to S. pombe Nim1p YDR507C - GIN4 - [] - putative serine/threonine kinase +-----------------------------(D1=0.146)+---(C=0.018) Kwal + +-----------------------------(D2=0.146)+-------------(E2=0.068) Scer2 + + +-------------(F2=0.070) Sbay2 +---------------------------------(E1=0.169) Scer1 +-------------------------------(F1=0.159) Sbay1 YCL035C_YDR513Wp.dnd YCL035C - GRX1 - [] - Glutaredoxin YDR513W - TTR1 - [] - Glutaredoxin (thioltransferase) (glutathione reductase) +--------------------(D1=0.101)+--------------------------------------------------------(C=0.281) Kwal + +-------------------------------------(D2=0.187)+-----(E2=0.028) Scer2 + + +--(F2=0.014) Sbay2 +---------(E1=0.048) Scer1 +--------------(F1=0.070) Sbay1 YCL036W_YDR514Cp.dnd YCL036W - GFD2 - [] - Hypothetical ORF YDR514C - - [] - Hypothetical ORF +------------------------------------------------------(C=0.271) Kwal +--------------------------------------------(D1=0.221)+-------------------(E1=0.100) Scer1 + +--------------------(F1=0.103) Sbay1 +---------------------------------------(D2=0.199)+---------------------(E2=0.108) Scer2 + +-------------------(F2=0.095) Sbay2 YCL040W_YDR516Cp.dnd YCL040W - GLK1 - [] - Glucokinase YDR516C - - [] - Hypothetical ORF +---------------------(D1=0.105)+------------------------------(C=0.152) Kwal + +--------------------------(D2=0.134)+--(E2=0.014) Scer2 + + +----(F2=0.024) Sbay2 +---(E1=0.016) Scer1 +--(F1=0.014) Sbay1 YCL043C_YDR518Wp.dnd YCL043C - PDI1 - [] - protein disulfide isomerase YDR518W - EUG1 - [] - Protein disulfide isomerase homolog +----------------------------------------(D1=0.201)+------------------------------------------------(C=0.241) Kwal + +----------------------------------------------------(D2=0.260)+---------------(E2=0.077) Scer2 + + +-------------------(F2=0.097) Sbay2 +------------(E1=0.062) Scer1 +---------------(F1=0.076) Sbay1 YCL048W_YDR522Cp.dnd YCL048W - - [] - Hypothetical ORF YDR522C - SPS2 - [] - involved in meiosis +-----------------------------------------(D2=0.208)+----------------------------------------------------------------------(C=0.354) Kwal + +-------------------------------------------(D1=0.217)+--------------(E1=0.070) Scer1 + + +-----------------(F1=0.085) Sbay1 +-------------------(E2=0.098) Scer2 +----------(F2=0.053) Sbay2 YCL050C_YDR530Cp.dnd YCL050C - APA1 - [] - diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase I YDR530C - APA2 - [] - 5',5'''-P-1,P-4-tetraphosphate phosphorylase II +-----------------(D2=0.087)+--------------------------------------------(C=0.225) Kwal + +---------------------------------(D1=0.170)+---------(E1=0.046) Scer1 + + +--------(F1=0.042) Sbay1 +------------------(E2=0.094) Scer2 +----------------------(F2=0.113) Sbay2 YCL051W_YDR528Wp.dnd YCL051W - LRE1 - [] - involved in laminarase resistance YDR528W - HLR1 - [] - LRE1 homolog; antagonistic to PKA +----------------------------------------(D1=0.204)+----------------------------------------------------------------------(C=0.353) Kwal + +---------------------------------------------------(D2=0.259)+---------------------------(E2=0.139) Scer2 + + +------------------------(F2=0.124) Sbay2 +---------------------------(E1=0.136) Scer1 +-------------------------(F1=0.126) Sbay1 YCR005C_YNR001Cp.dnd YCR005C - CIT2 - [] - non-mitochondrial citrate synthase YNR001C - CIT1 - [] - citrate synthase. Nuclear encoded mitochondrial protein. +----------(D2=0.053)+--------------------(C=0.104) Kwal + +------------------------(D1=0.123)+----(E1=0.024) Scer1 + + +---(F1=0.018) Sbay1 +---(E2=0.018) Scer2 +----(F2=0.021) Sbay2 YCR034W_YJL196Cp.dnd YCR034W - FEN1 - [] - Probable subunit of 1,3-beta-glucan synthase; homolog of ELO1 YJL196C - ELO1 - [] - Elongation enzyme 1 +-----------------(D1=0.089)+---------------------(C=0.108) Kwal + +------------------------------------(D2=0.182)+----------------------------(E2=0.143) Scer2 + + +-----------------------(F2=0.115) Sbay2 +------(E1=0.031) Scer1 +-------(F1=0.035) Sbay1 YCR037C_YJL198Wp.dnd YCR037C - PHO87 - [] - phosphate permease YJL198W - PHO90 - [] - Low-affinity phosphate transporter +--------------------(D2=0.104)+-------------------------------------------------------(C=0.276) Kwal + +----------------------(D1=0.112)+--------(E1=0.045) Scer1 + + +----------(F1=0.051) Sbay1 +----------(E2=0.052) Scer2 +-----------(F2=0.058) Sbay2 YCR048W_YNR019Wp.dnd YCR048W - ARE1 - [] - Acyl-CoA cholesterol acyltransferase (sterol-ester synthetase) YNR019W - ARE2 - [] - Acyl-CoA cholesterol acyltransferase (sterol-ester synthetase) +----------------------------(D2=0.142)+--------------------------------------------------(C=0.252) Kwal + +-----------------------------------------(D1=0.206)+------------------(E1=0.095) Scer1 + + +--------------------(F1=0.103) Sbay1 +---------------(E2=0.077) Scer2 +----------------(F2=0.081) Sbay2 YCR052W_YNR023Wp.dnd YCR052W - RSC6 - [] - subunit of chromatin remodeling complex YNR023W - SNF12 - [] - 73 kDa subunit of the SWI/SNF transcription activation complex, homolog of Rsc6p subunit of the RSC chromatin remodeling complex +----------------------------------------(D2=0.201)+--------------------------------------------------(C=0.254) Kwal + +------------------------------------------------------(D1=0.272)+-------------------------(E1=0.126) Scer1 + + +---------------------(F1=0.108) Sbay1 +-----------------------(E2=0.118) Scer2 +-----------------------(F2=0.115) Sbay2 YCR069W_YNR028Wp.dnd YCR069W - CPR4 - [] - cyclophilin homolog YNR028W - CPR8 - [] - Cyclophilin +-----------------------------------(D1=0.179)+------------------------------------------------------------(C=0.304) Kwal + +-------------------------------------(D2=0.187)+------------------------------------(E2=0.181) Scer2 + + +-----------------------------------------(F2=0.210) Sbay2 +-----------------------------(E1=0.149) Scer1 +-----------------------------(F1=0.147) Sbay1 YCR073C_YNR031Cp.dnd YCR073C - SSK22 - [] - protein kinase YNR031C - SSK2 - [] - A MAP kinase kinase kinase; activator of Pbs2p +--------------------------------------------------(C=0.253) Kwal +-----------------------(D1=0.115)+---------------------------(E1=0.138) Scer1 + +---------------------------(F1=0.139) Sbay1 +--------------------------------------(D2=0.195)+--------(E2=0.043) Scer2 + +---------(F2=0.046) Sbay2 YCR073W-A_YNR034Wp.dnd YCR073W-A - SOL2 - [] - shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol1p and Sol3p YNR034W - SOL1 - [] - shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol2p and Sol3p +--------------------------(C=0.133) Kwal +--------------(D1=0.070)+----------(E1=0.050) Scer1 + +----(F1=0.024) Sbay1 +------------------(D2=0.090)+------(E2=0.032) Scer2 + +-----(F2=0.028) Sbay2 YCR091W_YNR047Wp.dnd YCR091W - KIN82 - [] - Putative serine/threonine protein kinase most similar to cyclic nucleotide-dependent protein kinase subfamily and the protein kinase C subfamily YNR047W - - [] - Hypothetical ORF +---------------------------(D1=0.140)+------------------------------------------------(C=0.242) Kwal + +------------------------------(D2=0.154)+---------------(E2=0.079) Scer2 + + +-------------(F2=0.070) Sbay2 +-------------------------(E1=0.128) Scer1 +------------------------(F1=0.122) Sbay1 YCR094W_YNR048Wp.dnd YCR094W - CDC50 - [] - involved in cell cycle YNR048W - - [] - Hypothetical ORF +----------------------------(D1=0.141)+------------------------------------(C=0.183) Kwal + +-----------------------------(D2=0.145)+----------------(E2=0.083) Scer2 + + +-------------(F2=0.070) Sbay2 +--------------(E1=0.074) Scer1 +----------------(F1=0.080) Sbay1 YDL021W_YOL056Wp.dnd YDL021W - GPM2 - [] - phosphoglycerate mutase, involved in glycolysis YOL056W - GPM3 - [] - phosphoglycerate mutase +---------------(D2=0.076)+-------------------------------------------(C=0.216) Kwal + +---------------------------(D1=0.140)+-------(E1=0.039) Scer1 + + +--------(F1=0.045) Sbay1 +---------------(E2=0.075) Scer2 +----------------(F2=0.083) Sbay2 YDL042C_YOL068Cp.dnd YDL042C - SIR2 - [] - regulator of silencing at HML, HMR, telomeres, and rDNA YOL068C - HST1 - [] - Homolog of SIR2 +---------------------------------------------(C=0.229) Kwal +---------------------------(D1=0.138)+---------------(E1=0.076) Scer1 + +------------(F1=0.063) Sbay1 +-------------------------(D2=0.125)+--------------(E2=0.071) Scer2 + +-------(F2=0.038) Sbay2 YDL048C_YLR375Wp.dnd YDL048C - STP4 - [] - involved in tRNA splicing YLR375W - STP3 - [] - Involved in pre-tRNA splicing +--------------------------------(D1=0.162)+----------------------------------------------------------------(C=0.320) Kwal + +-------------------------------------------------(D2=0.245)+-(E2=0.006) Scer2 + + +------------(F2=0.064) Sbay2 +--------------(E1=0.075) Scer1 +------------------(F1=0.092) Sbay1 YDL049C_YJL174Wp.dnd YDL049C - KNH1 - [] - KRE9 homolog YJL174W - KRE9 - [] - involved in beta-1,6-glucan assembly +--------------------------------(D2=0.162)+-------------------------------------------------------------------------(C=0.369) Kwal + +--------------------------------------(D1=0.191)+------------------(E1=0.094) Scer1 + + +-(F1=0.008) Sbay1 +-------------------(E2=0.095) Scer2 +---------------------(F2=0.107) Sbay2 YDL061C_YLR388Wp.dnd YDL061C - RPS29B - [] - Ribosomal protein S29B (S36B) (YS29) YLR388W - RPS29A - [] - Ribosomal protein S29A (S36A) (YS29) +---(D2=0.018)+--------(C=0.045) Kwal + +-----(D1=0.027)+-(E1=0.006) Scer1 + + +--(F1=0.012) Sbay1 +-------(E2=0.036) Scer2 +-------(F2=0.036) Sbay2 YDL070W_YLR399Cp.dnd YDL070W - BDF2 - [] - Bromodomain protein, homolog of Bdf1 YLR399C - BDF1 - [] - Bdf1p contains two bromodomains, localizes to the nucleus and to chomosomes in spread meiotic nuclei but is excluded from the nucleolus +--------------------------------(D2=0.160)+--------------------------------------------(C=0.224) Kwal + +------------------------------------------------------------------(D1=0.335)+----------------(E1=0.085) Scer1 + + +------------------(F1=0.095) Sbay1 +-------------(E2=0.069) Scer2 +-------------(F2=0.070) Sbay2 YDL085W_YMR145Cp.dnd YDL085W - NDE2 - [] - Hypothetical ORF YMR145C - NDE1 - [] - Hypothetical ORF +------------------------(D2=0.123)+----------------------------(C=0.143) Kwal + +---------------------------------------(D1=0.199)+-----------(E1=0.060) Scer1 + + +---------(F1=0.049) Sbay1 +--------(E2=0.044) Scer2 +---------(F2=0.046) Sbay2 YDL088C_YMR153Wp.dnd YDL088C - ASM4 - [] - Nuclear pore complex protein YMR153W - NUP53 - [] - Component of karyopherin docking complex of the nuclear pore complex +--------------------------------------(D1=0.192)+-----------------------------------------------------------(C=0.299) Kwal + +--------------------------------------------(D2=0.221)+-------------------------------(E2=0.157) Scer2 + + +-----------------------------(F2=0.150) Sbay2 +------------------------------(E1=0.152) Scer1 +-----------------------------(F1=0.147) Sbay1 YDL130W-A_YDL181Wp.dnd YDL130W-A - STF1 - [] - ATPase stabilizing factor YDL181W - INH1 - [] - ATPase inhibitor +------------------------------------------(D2=0.213)+-------------------------------------------------------------(C=0.305) Kwal + +--------------------------------------------------(D1=0.253)+-------------------(E1=0.097) Scer1 + + +-------------(F1=0.066) Sbay1 +--(E2=0.015) Scer2 +----(F2=0.021) Sbay2 YDL155W_YLR210Wp.dnd YDL155W - CLB3 - [] - G(sub)2-specific B-type cyclin YLR210W - CLB4 - [] - G(sub)2-specific B-type cyclin +-------------------------------------(D1=0.188)+---------------------------------------------(C=0.230) Kwal + +---------------------------------------(D2=0.198)+-----------------(E2=0.088) Scer2 + + +--------------------(F2=0.104) Sbay2 +-----------------(E1=0.086) Scer1 +-------------(F1=0.068) Sbay1 YDL161W_YLR206Wp.dnd YDL161W - ENT1 - [] - Ent1p YLR206W - ENT2 - [] - Ent2p +----------------------(D1=0.111)+-------------------------------------------(C=0.216) Kwal + +-----------------------(D2=0.117)+-------------(E2=0.068) Scer2 + + +-----------------(F2=0.085) Sbay2 +----------------(E1=0.083) Scer1 +--------------(F1=0.071) Sbay1 YDL175C_YIL079Cp.dnd YDL175C - AIR2 - [] - YIL079C - AIR1 - [] - +------------------------(D2=0.125)+-------------------------------------------------------------(C=0.308) Kwal + +---------------------------------------------(D1=0.229)+----------------(E1=0.084) Scer1 + + +---------------(F1=0.080) Sbay1 +----------------------(E2=0.112) Scer2 +--------------------(F2=0.102) Sbay2 YDL204W_YDR233Cp.dnd YDL204W - - [] - Hypothetical ORF YDR233C - - [] - Hypothetical ORF +-------------------------------------------(D2=0.216)+---------------------------------------------------------(C=0.287) Kwal + +-------------------------------------------------------------------(D1=0.338)+-------------------------(E1=0.129) Scer1 + + +---------------------------(F1=0.138) Sbay1 +-----------(E2=0.058) Scer2 +-----------(F2=0.058) Sbay2 YDL214C_YNL183Cp.dnd YDL214C - PRR2 - [] - YNL183C - NPR1 - [] - protein kinase homolog +--------------------------(D2=0.130)+---------------------------------------(C=0.198) Kwal + +---------------------------------------------------------------------(D1=0.345)+---------------------------(E1=0.137) Scer1 + + +-----------------------(F1=0.119) Sbay1 +----------(E2=0.051) Scer2 +--------(F2=0.043) Sbay2 YDL222C_YNL194Cp.dnd YDL222C - - [] - Hypothetical ORF YNL194C - - [] - Hypothetical ORF +-------------------------------(D1=0.156)+-----------------------------------------------------------(C=0.297) Kwal + +----------------------------------------(D2=0.202)+---------------(E2=0.078) Scer2 + + +-------------------(F2=0.098) Sbay2 +----------------(E1=0.083) Scer1 +-----------------(F1=0.089) Sbay1 YDL226C_YNL204Cp.dnd YDL226C - GCS1 - [] - ADP-ribosylation factor GTPase-activating protein (ARF GAP) YNL204C - SPS18 - [] - Transcription factor +----------------------------------(C=0.175) Kwal +-----------------------(D1=0.119)+---------------(E1=0.076) Scer1 + +--------------(F1=0.075) Sbay1 +-------------------------------------------------------------------------------(D2=0.399)+-------------------------(E2=0.126) Scer2 + +----------------------(F2=0.114) Sbay2 YDL239C_YNL225Cp.dnd YDL239C - ADY3 - [] - Protein involved in Accumulation of DYads YNL225C - CNM67 - [] - Spindle pole body protein involved in nuclear migration +---------------------------------------------------------------------------(C=0.378) Kwal +-----------------------------------------------(D1=0.236)+---------------------------------------(E1=0.198) Scer1 + +------------------------------------(F1=0.184) Sbay1 +----------------------------------------------------(D2=0.262)+--------------------------------(E2=0.164) Scer2 + +--------------------------(F2=0.130) Sbay2 YDR066C_YER139Cp.dnd YDR066C - - [] - Hypothetical ORF YER139C - - [] - Hypothetical ORF +--------------------------------------(D2=0.193)+---------------------------------------------------(C=0.257) Kwal + +-------------------------------------------------(D1=0.245)+------------------------------------------(E1=0.210) Scer1 + + +---------------------------------------(F1=0.198) Sbay1 +-------(E2=0.039) Scer2 +--------(F2=0.040) Sbay2 YDR069C_YER144Cp.dnd YDR069C - DOA4 - [] - ubiquitin isopeptidase YER144C - UBP5 - [] - Putative Ubiquitin-specific protease +-----------------------------------(D1=0.176)+--------------------------(C=0.135) Kwal + +---------------------------------------(D2=0.198)+---------------------------(E2=0.137) Scer2 + + +----------------------------(F2=0.141) Sbay2 +--------------(E1=0.071) Scer1 +------------(F1=0.065) Sbay1 YDR077W_YER150Wp.dnd YDR077W - SED1 - [] - putative cell surface glycoprotein YER150W - SPI1 - [] - similar to Sed1; highly expressed in stationary phase +--------------------------(D2=0.135)+--------------------------------------------------------------------------(C=0.373) Kwal + +--------------------------------------(D1=0.191)+----------------(E1=0.082) Scer1 + + +---------------------(F1=0.109) Sbay1 +-----------------(E2=0.090) Scer2 +--------------(F2=0.072) Sbay2 YDR085C_YER158Cp.dnd YDR085C - AFR1 - [] - cytoskeletal protein, similar to arrestins YER158C - - [] - Hypothetical ORF +--------------------------------------------(D1=0.223)+-------------------------------------------------------------------------------(C=0.395) Kwal + +-----------------------------------------------------(D2=0.267)+---------------------------(E2=0.139) Scer2 + + +-----------------------------(F2=0.147) Sbay2 +------------------------------------(E1=0.183) Scer1 +-------------------------------------(F1=0.190) Sbay1 YDR098C_YER174Cp.dnd YDR098C - GRX3 - [] - Protein with glutaredoxin activity YER174C - GRX4 - [] - Protein with glutaredoxin activity +------------------------------------(C=0.182) Kwal +------------------(D1=0.093)+----------(E1=0.053) Scer1 + +------------(F1=0.062) Sbay1 +-------------------(D2=0.096)+---------------(E2=0.079) Scer2 + +-----------(F2=0.056) Sbay2 YDR099W_YER177Wp.dnd YDR099W - BMH2 - [] - member of conserved eukaryotic 14-3-3 gene family YER177W - BMH1 - [] - Homolog of mammalian 14-3-3 proteins +----(D2=0.025)+----------(C=0.055) Kwal + +-----(D1=0.025)+--(E1=0.012) Scer1 + + +-(F1=0.007) Sbay1 +--(E2=0.012) Scer2 +-(F2=0.007) Sbay2 YDR107C_YLR083Cp.dnd YDR107C - - [] - Hypothetical ORF YLR083C - EMP70 - [] - endosomal membrane protein +----------------------------------------(C=0.202) Kwal +--------------(D1=0.072)+--------------(E1=0.072) Scer1 + +----------------(F1=0.082) Sbay1 +------------(D2=0.061)+----------(E2=0.054) Scer2 + +------------(F2=0.063) Sbay2 YDR111C_YLR089Cp.dnd YDR111C - - [] - Hypothetical ORF YLR089C - - [] - Hypothetical ORF +------------------------(D2=0.123)+-----------------------------------------(C=0.210) Kwal + +---------------------------(D1=0.139)+-------------(E1=0.068) Scer1 + + +---------------(F1=0.076) Sbay1 +--------(E2=0.042) Scer2 +-------(F2=0.036) Sbay2 YDR125C_YLR099Cp.dnd YDR125C - ECM18 - [] - (putative) involved in cell wall biogenesis YLR099C - ICT1 - [] - Increased Copper Tolerance; Similar to Ecm18p +-----------------------(D1=0.116)+-------------------------------------------(C=0.220) Kwal + +-----------------------------------------------------------------(D2=0.329)+-----(E2=0.025) Scer2 + + +-------------(F2=0.069) Sbay2 +----------------------(E1=0.111) Scer1 +--------------------(F1=0.103) Sbay1 YDR132C_YLR108Cp.dnd YDR132C - - [] - Hypothetical ORF YLR108C - - [] - Hypothetical ORF +------------------------------(D1=0.154)+-------------------------------------------------------------------(C=0.338) Kwal + +-------------------------------(D2=0.158)+---------------------------------(E2=0.168) Scer2 + + +-------------------------------------(F2=0.189) Sbay2 +----------------------(E1=0.111) Scer1 +----------------------(F1=0.111) Sbay1 YDR134C_YLR110Cp.dnd YDR134C - - [] - Hypothetical ORF YLR110C - CCW12 - [] - +----------(D1=0.054)+--------------------------------------------------(C=0.251) Kwal + +----------------(D2=0.082)+--------(E2=0.041) Scer2 + + +--(F2=0.012) Sbay2 +---------(E1=0.048) Scer1 +----------(F1=0.052) Sbay1 YDR147W_YLR133Wp.dnd YDR147W - EKI1 - [] - Ethanolamine Kinase YLR133W - CKI1 - [] - choline kinase +-------------------------------(D2=0.157)+--------------------------------------------------(C=0.254) Kwal + +------------------------------------------------------(D1=0.275)+----------------------------(E1=0.144) Scer1 + + +-------------------------(F1=0.130) Sbay1 +--------------(E2=0.073) Scer2 +--------------(F2=0.071) Sbay2 YDR151C_YLR136Cp.dnd YDR151C - CTH1 - [] - member of the CCCH zinc finger protein family that has two or more repeats of a novel zinc finger motif consisting of Cys and His residues in the form Cx8Cx5Cx3H [where x is a variable amino acid (aa)] YLR136C - TIS11 - [] - homolog of mammalian TIS11 +-------------------------------(D1=0.159)+-----------------------------------------------------------(C=0.297) Kwal + +-----------------------------------------------(D2=0.238)+------------(E2=0.065) Scer2 + + +---------------(F2=0.076) Sbay2 +--------------------------(E1=0.134) Scer1 +------------------------(F1=0.125) Sbay1 YDR178W_YLR164Wp.dnd YDR178W - SDH4 - [] - succinate dehydrogenase membrane anchor subunit YLR164W - - [] - Hypothetical ORF +-------------------------------------(D2=0.189)+---------------------------------------------------------(C=0.288) Kwal + +----------------------------------------(D1=0.205)+----------(E1=0.052) Scer1 + + +----------(F1=0.053) Sbay1 +-------------(E2=0.066) Scer2 +----------------(F2=0.083) Sbay2 YDR200C_YLR238Wp.dnd YDR200C - VPS64 - [] - YLR238W - - [] - Hypothetical ORF +--------------------------------------(D1=0.192)+------------------------------------------------(C=0.244) Kwal + +---------------------------------------------(D2=0.229)+--------------------(E2=0.103) Scer2 + + +-----------------(F2=0.089) Sbay2 +------------------(E1=0.094) Scer1 +--------------------(F1=0.105) Sbay1 YDR206W_YLR233Cp.dnd YDR206W - EBS1 - [] - similar to Est1, which is a putative component of telomerase YLR233C - EST1 - [] - involved in telomere length regulation +-----------------------------------------(D2=0.206)+-----------------------------------------------------------------------(C=0.358) Kwal + +-----------------------------------------(D1=0.208)+-----------------------------(E1=0.149) Scer1 + + +-------------------------------(F1=0.158) Sbay1 +---------------------------------------(E2=0.199) Scer2 +--------------------------------------(F2=0.193) Sbay2 YDR222W_YLR225Cp.dnd YDR222W - - [] - Hypothetical ORF YLR225C - - [] - Hypothetical ORF +---------------------------------(D2=0.170)+-------------------------------------------------------------------------(C=0.366) Kwal + +------------------------------------(D1=0.184)+---------------(E1=0.075) Scer1 + + +-----------------(F1=0.086) Sbay1 +------------(E2=0.062) Scer2 +-----------(F2=0.056) Sbay2 YDR223W_YLR223Cp.dnd YDR223W - - [] - Hypothetical ORF YLR223C - IFH1 - [] - has a weak RNA-dependent ATPase activity which is not specific for rRNA +--------------------------------------(D2=0.191)+---------------------------------------------------(C=0.256) Kwal + +-------------------------------------------------(D1=0.246)+----------------------------------------------------(E1=0.264) Scer1 + + +--------------------------------------------------(F1=0.252) Sbay1 +--------------(E2=0.070) Scer2 +-------------------------(F2=0.126) Sbay2 YDR247W_YPL026Cp.dnd YDR247W - - [] - Hypothetical ORF YPL026C - SKS1 - [] - serine/threonine protein kinase homologous to Ran1p +-----------------------------------(D1=0.178)+---------------------------------------------------(C=0.256) Kwal + +-------------------------------------------(D2=0.218)+-------(E2=0.037) Scer2 + + +-------------(F2=0.069) Sbay2 +------------------------(E1=0.123) Scer1 +------------------------(F1=0.125) Sbay1 YDR252W_YPL037Cp.dnd YDR252W - BTT1 - [] - negative regulator of RNA polymerase II YPL037C - EGD1 - [] - regulator of pol II transcribed genes +------------------------------(C=0.152) Kwal +----------------------------------------------------(D1=0.261)+-----------------(E1=0.089) Scer1 + +-----------------------(F1=0.119) Sbay1 +----------------------------(D2=0.141)+---(E2=0.015) Scer2 + +---(F2=0.017) Sbay2 YDR253C_YPL038Wp.dnd YDR253C - MET32 - [] - zinc finger DNA binding factor, transcriptional regulator of sulfur amino acid metabolism, highly homologous to Met31p YPL038W - MET31 - [] - zinc finger DNA binding factor, transcriptional regulator of sulfur amino acid metabolism, highly homologous to Met32p +----------------------------(D1=0.143)+---------------------------------------------------------(C=0.286) Kwal + +----------------------------------------(D2=0.205)+-----------------(E2=0.089) Scer2 + + +-----------------(F2=0.088) Sbay2 +-------------------------------(E1=0.159) Scer1 +-----------------------------------------------(F1=0.240) Sbay1 YDR259C_YOR028Cp.dnd YDR259C - YAP6 - [] - basic leucine zipper transcription factor YOR028C - CIN5 - [] - bZIP protein, can activate transcription from a promoter containing a Yap recognition site +-------------------------------------------(D2=0.217)+---------------------------------------------------------------------------------------(C=0.437) Kwal + +-------------------------------------------------(D1=0.247)+-------------------------------(E1=0.159) Scer1 + + +------------------------------(F1=0.154) Sbay1 +-------------------------------(E2=0.155) Scer2 +---------------------------(F2=0.140) Sbay2 YDR263C_YOR033Cp.dnd YDR263C - DIN7 - [] - involved in DNA repair YOR033C - EXO1 - [] - exonuclease +----------------------------------------------------------(C=0.290) Kwal +-------------------(D1=0.096)+-------------------------(E1=0.125) Scer1 + +----------------------(F1=0.115) Sbay1 +----------------------------------(D2=0.173)+-----------------------(E2=0.116) Scer2 + +--------------------(F2=0.103) Sbay2 YDR264C_YOR034Cp.dnd YDR264C - AKR1 - [] - Ankyrin repeat-containing protein YOR034C - AKR2 - [] - involved in constitutive endocytosis of Ste3p +-------------------------------(D1=0.158)+-----------------------------------------------------(C=0.270) Kwal + +----------------------------------------------------(D2=0.264)+------------------------(E2=0.124) Scer2 + + +---------------------(F2=0.109) Sbay2 +---------------(E1=0.080) Scer1 +--------------(F1=0.075) Sbay1 YDR272W_YOR040Wp.dnd YDR272W - GLO2 - [] - Cytoplasmic glyoxylase-II YOR040W - GLO4 - [] - Mitochondrial glyoxylase-II +------------------(D1=0.090)+-----------------------------------(C=0.178) Kwal + +--------------------(D2=0.102)+-----------------------(E2=0.119) Scer2 + + +------------------------(F2=0.123) Sbay2 +------------------(E1=0.095) Scer1 +----------------(F1=0.080) Sbay1 YDR277C_YOR047Cp.dnd YDR277C - MTH1 - [] - Protein is 61% identical to Msn3p YOR047C - STD1 - [] - homologous to MTH1; interacts with the SNF1 protein kinase and TBP in two-hybrid and in in vitro binding studies +-----------------------(D2=0.118)+-----------------------------------------------(C=0.237) Kwal + +-------------------------(D1=0.127)+-----------(E1=0.056) Scer1 + + +----------(F1=0.055) Sbay1 +-------------------(E2=0.100) Scer2 +-----------------(F2=0.088) Sbay2 YDR304C_YHR057Cp.dnd YDR304C - CPR5 - [] - Cyclophilin D, Peptidyl-prolyl cis-trans isomerase D YHR057C - CPR2 - [] - Peptidylprolyl isomerase (cyclophilin) ER or secreted +--------------------------------(D1=0.161)+-----------------------------------------(C=0.209) Kwal + +---------------------------------------(D2=0.196)+-----------(E2=0.059) Scer2 + + +--------(F2=0.043) Sbay2 +------------(E1=0.061) Scer1 +--------------(F1=0.072) Sbay1 YDR309C_YHR061Cp.dnd YDR309C - GIC2 - [] - Cdc42 binding protein, involved in bud emergence YHR061C - GIC1 - [] - interacts with GTPase, involved in bud emergence +----------------------------------------(D1=0.204)+------------------------------------------------------------------(C=0.333) Kwal + +-----------------------------------------------------(D2=0.267)+-----------------------(E2=0.117) Scer2 + + +-----------------------(F2=0.116) Sbay2 +---------------------------(E1=0.136) Scer1 +----------------------(F1=0.114) Sbay1 YDR341C_YHR091Cp.dnd YDR341C - - [] - Protein required for cell viability YHR091C - MSR1 - [] - Arginyl-tRNA synthetase +------------(D1=0.060)+-------------------------------------------------(C=0.247) Kwal + +-------------------------------------------(D2=0.219)+-----------------------(E2=0.118) Scer2 + + +--------------------(F2=0.103) Sbay2 +-----(E1=0.025) Scer1 +-----(F1=0.026) Sbay1 YDR351W_YHR103Wp.dnd YDR351W - SBE2 - [] - involved in bud growth YHR103W - SBE22 - [] - involved in bud growth +---------------------------------------(D2=0.197)+--------------------------------------------------------(C=0.284) Kwal + +---------------------------------------(D1=0.198)+---------------------(E1=0.106) Scer1 + + +------------------------(F1=0.124) Sbay1 +-------------------(E2=0.098) Scer2 +--------------------(F2=0.101) Sbay2 YDR353W_YHR106Wp.dnd YDR353W - TRR1 - [] - Thioredoxin reductase YHR106W - TRR2 - [] - mitochondrial thioredoxin reductase +(D1=0.004)+---------------------(C=0.109) Kwal + +----------(D2=0.053)+-------------(E2=0.066) Scer2 + + +-------------(F2=0.069) Sbay2 +----(E1=0.025) Scer1 +------(F1=0.035) Sbay1 YDR358W_YHR108Wp.dnd YDR358W - GGA1 - [] - Arf-binding protein YHR108W - GGA2 - [] - Arf-binding protein +-------------------------(D2=0.125)+-----------------------------------(C=0.177) Kwal + +-------------------------------(D1=0.158)+---------------------------(E1=0.140) Scer1 + + +-------------------------(F1=0.126) Sbay1 +------------(E2=0.061) Scer2 +--------------(F2=0.071) Sbay2 YDR368W_YOR120Wp.dnd YDR368W - YPR1 - [] - similar to aldo-keto reductase YOR120W - GCY1 - [] - Similar to mammalian aldo/keto reductases +---------------------(D2=0.106)+--------------------------------------------------------(C=0.282) Kwal + +----------------------------(D1=0.143)+-------(E1=0.038) Scer1 + + +-----(F1=0.029) Sbay1 +------------(E2=0.063) Scer2 +-----------(F2=0.056) Sbay2 YDR379W_YOR127Wp.dnd YDR379W - RGA2 - [] - Contains a Rho-GAP domain and two LIM domains. Has strong similarity to Rga1p. Has some similarity to all known Rho-GAPs. YOR127W - RGA1 - [] - rho type GTPase activating protein +------------------------------------(D2=0.183)+---------------------------------------------------------(C=0.287) Kwal + +-------------------------------------------(D1=0.219)+-----------------------------(E1=0.146) Scer1 + + +--------------------------(F1=0.133) Sbay1 +-----------------------------(E2=0.148) Scer2 +--------------------------(F2=0.132) Sbay2 YDR389W_YOR134Wp.dnd YDR389W - SAC7 - [] - GTPase activating protein (GAP) for RHO1 YOR134W - BAG7 - [] - GTPase activating protein (GAP) +-----------------------------------------------------(C=0.268) Kwal +--------------------------------------(D1=0.193)+------------(E1=0.062) Scer1 + +--------(F1=0.043) Sbay1 +------------------------------------------------(D2=0.241)+-----------------------(E2=0.117) Scer2 + +---------------------------------------(F2=0.198) Sbay2 YDR409W_YOR156Cp.dnd YDR409W - SIZ1 - [] - YOR156C - NFI1 - [] - interacts with C-terminus of CDC12 +---------------------------------------(D1=0.198)+-------------------------------------------------------------------(C=0.336) Kwal + +----------------------------------------------(D2=0.232)+--------------------(E2=0.101) Scer2 + + +----------------------(F2=0.114) Sbay2 +-----------------------------(E1=0.145) Scer1 +---------------------------(F1=0.140) Sbay1 YDR418W_YEL054Cp.dnd Incorrect topology probable. Skipped YDR418W_YEL054Cp.dnd YDR418W - RPL12B - [] - Ribosomal protein L12B (L15B) (YL23) YEL054C - RPL12A - [] - Ribosomal protein L12A (L15A) (YL23) +-(?=0.006)+----------------(C=0.085) Kwal + +-(?=0.006)+(E1=0.000) Scer1 + + +(E2=0.000) Scer2 +(F1=0.000) Sbay1 +(F2=0.000) Sbay2 YDR438W_YML018Cp.dnd YDR438W - - [] - Hypothetical ORF YML018C - - [] - Hypothetical ORF +--------------------------(C=0.133) Kwal +----------------------------------------------------------(D1=0.294)+-------------------------(E1=0.129) Scer1 + +---------------------------(F1=0.136) Sbay1 +---------------------------(D2=0.137)+------------(E2=0.065) Scer2 + +------------(F2=0.065) Sbay2 YDR441C_YML022Wp.dnd YDR441C - APT2 - [] - Adenine Phosphoribosyltransferase YML022W - APT1 - [] - Adenine phosphoribosyltransferase +-------------(D2=0.067)+-----------------------------------(C=0.178) Kwal + +--------------------------------------------(D1=0.222)+---------------(E1=0.076) Scer1 + + +----------------(F1=0.084) Sbay1 +----------(E2=0.055) Scer2 +-----------(F2=0.057) Sbay2 YDR463W_YHR006Wp.dnd YDR463W - STP1 - [] - Nuclear-localized protein containing zinc finger motifs YHR006W - STP2 - [] - Zinc finger (Cys(2)-His(2)) +----------------------------------------------------------------------(C=0.351) Kwal +------------------------------------------(D1=0.210)+----------------------(E1=0.112) Scer1 + +---------------------(F1=0.107) Sbay1 +-----------------------------------------(D2=0.208)+-----------------------------(E2=0.149) Scer2 + +----------------------------(F2=0.141) Sbay2 YDR474C_YOR019Wp.dnd YDR474C - - [] - Hypothetical ORF YOR019W - - [] - Hypothetical ORF +-----------------------------------------------------------------------(C=0.357) Kwal +--------------------------------------(D1=0.192)+-------------------------------------(E1=0.189) Scer1 + +-------------------(F1=0.098) Sbay1 +-------------------------------------(D2=0.187)+-------------------------------------(E2=0.189) Scer2 + +-----------------------------------(F2=0.175) Sbay2 YDR480W_YPL049Cp.dnd YDR480W - DIG2 - [] - MAP kinase-associated protein YPL049C - DIG1 - [] - MAP kinase-associated protein +-----------------------------------(D1=0.180)+-------------------------------------------------------------------------(C=0.365) Kwal + +-----------------------------------------------------(D2=0.267)+------------------------------(E2=0.154) Scer2 + + +-------------------------------(F2=0.158) Sbay2 +----------------------------------------(E1=0.202) Scer1 +------------------------------------------(F1=0.210) Sbay1 YDR483W_YPL053Cp.dnd YDR483W - KRE2 - [] - alpha-1,2-mannosyltransferase YPL053C - KTR6 - [] - mannosylphosphate transferase +---------------------------(D1=0.140)+-----------------------------------------------------(C=0.268) Kwal + +-------------------------------------------------------------(D2=0.305)+----------------(E2=0.081) Scer2 + + +--------------(F2=0.073) Sbay2 +---------------(E1=0.078) Scer1 +------------------(F1=0.092) Sbay1 YDR490C_YOL100Wp.dnd YDR490C - PKH1 - [] - Ser/Thr protein kinase YOL100W - PKH2 - [] - Ser/Thr protein kinase +---------------------------------------------------------(C=0.287) Kwal +-----------------------------------(D1=0.178)+------------------------(E1=0.125) Scer1 + +----------------------(F1=0.115) Sbay1 +--------------------------------------(D2=0.190)+----------------------(E2=0.112) Scer2 + +-----------------------(F2=0.119) Sbay2 YDR492W_YOL101Cp.dnd YDR492W - - [] - Hypothetical ORF YOL101C - - [] - Hypothetical ORF +------------------------------------------(D1=0.211)+------------------------------------------(C=0.212) Kwal + +---------------------------------------------------------------------------------------(D2=0.438)+-----------(E2=0.055) Scer2 + + +------------(F2=0.064) Sbay2 +---------(E1=0.048) Scer1 +----------(F1=0.051) Sbay1 YDR497C_YOL103Wp.dnd YDR497C - ITR1 - [] - myo-inositol transporter YOL103W - ITR2 - [] - myo-inositol transporter +--------(D1=0.044)+----------------------------------------(C=0.201) Kwal + +--------------(D2=0.070)+---------(E2=0.050) Scer2 + + +-----------(F2=0.055) Sbay2 +--------(E1=0.044) Scer1 +---------(F1=0.049) Sbay1 YEL006W_YIL006Wp.dnd YEL006W - - [] - Hypothetical ORF YIL006W - - [] - Hypothetical ORF +----------------------------(D2=0.143)+----------------------------------------------(C=0.235) Kwal + +------------------------------------(D1=0.182)+---------------(E1=0.077) Scer1 + + +------------(F1=0.063) Sbay1 +------------(E2=0.063) Scer2 +-------------(F2=0.069) Sbay2 YEL034W_YJR047Cp.dnd YEL034W - HYP2 - [] - Translation initiation factor eIF-5A YJR047C - ANB1 - [] - anaerobically expressed form of translation initiation factor eIF-5A +---(D2=0.017)+------------------------(C=0.120) Kwal + +---(D1=0.017)+-----(E1=0.028) Scer1 + + +-------(F1=0.036) Sbay1 +------(E2=0.031) Scer2 +-------(F2=0.039) Sbay2 YEL039C_YJR048Wp.dnd YEL039C - CYC7 - [] - iso-2-cytochrome c YJR048W - CYC1 - [] - iso-1-cytochrome c +----------(D2=0.050)+-----------------------(C=0.119) Kwal + +------------(D1=0.063)+---------(E1=0.046) Scer1 + + +----(F1=0.025) Sbay1 +-(E2=0.008) Scer2 +--(F2=0.010) Sbay2 YEL041W_YJR049Cp.dnd YEL041W - - [] - Hypothetical ORF YJR049C - UTR1 - [] - involved in ferric reductase activity +-----------------------------------(D1=0.177)+-----------------------------------------------------------(C=0.300) Kwal + +---------------------------------------(D2=0.198)+------(E2=0.034) Scer2 + + +-------(F2=0.038) Sbay2 +----------------------(E1=0.113) Scer1 +---------------------(F1=0.105) Sbay1 YEL047C_YJR051Wp.dnd YEL047C - - [] - Fumurate ReDuctase Soluble YJR051W - OSM1 - [] - osmotic growth protein +-----------------------(D1=0.116)+---------------------------------------(C=0.197) Kwal + +-----------------------------(D2=0.146)+-------------(E2=0.065) Scer2 + + +-------------(F2=0.069) Sbay2 +---------(E1=0.046) Scer1 +---------(F1=0.048) Sbay1 YEL060C_YOR003Wp.dnd YEL060C - PRB1 - [] - vacuolar protease B YOR003W - YSP3 - [] - subtilisin-like protease III +---------------------------------------(C=0.197) Kwal +-----------------(D1=0.090)+------------------(E1=0.094) Scer1 + +------------------(F1=0.091) Sbay1 +---------------------------------(D2=0.169)+------------------------(E2=0.124) Scer2 + +------------------------(F2=0.120) Sbay2 YER037W_YGL224Cp.dnd YER037W - PHM8 - [] - involved in phosphate metabolism YGL224C - SDT1 - [] - +---------------------------------------(C=0.195) Kwal +-------------------------------------------------------(D1=0.275)+-----------(E1=0.057) Scer1 + +--------------(F1=0.074) Sbay1 +---------------------------------(D2=0.169)+---------(E2=0.047) Scer2 + +----------(F2=0.053) Sbay2 YER045C_YIL036Wp.dnd YER045C - ACA1 - [] - YIL036W - CST6 - [] - Chromosome STability +------------------------------------(D1=0.180)+------------------------------------------------------------------(C=0.332) Kwal + +--------------------------------------(D2=0.195)+----------------------------------(E2=0.173) Scer2 + + +-----------------------------(F2=0.145) Sbay2 +-------------------------------------------(E1=0.217) Scer1 +-----------------------------------------(F1=0.207) Sbay1 YER057C_YIL051Cp.dnd YER057C - HMF1 - [] - heat-regulated protein YIL051C - MMF1 - [] - Maintenance of Mitochondrial DNA 1 +-----------------(D1=0.085)+-------------------------------------(C=0.190) Kwal + +--------------------------(D2=0.130)+-----(E2=0.028) Scer2 + + +--------(F2=0.041) Sbay2 +----------(E1=0.051) Scer1 +--------------(F1=0.073) Sbay1 YER059W_YIL050Wp.dnd YER059W - PCL6 - [] - PHO85 cyclin YIL050W - PCL7 - [] - PHO85 cyclin +-----------------------------------------------------------------(C=0.327) Kwal +----------------------------------------(D1=0.204)+----------------------(E1=0.114) Scer1 + +-------------------(F1=0.098) Sbay1 +--------------------(D2=0.105)+-------------------(E2=0.097) Scer2 + +-------------------------(F2=0.128) Sbay2 YER062C_YIL053Wp.dnd YER062C - HOR2 - [] - DL-glycerol-3-phosphatase YIL053W - RHR2 - [] - DL-glycerol-3-phosphatase +---(D2=0.017)+---------------(C=0.079) Kwal + +----(D1=0.021)+---(E1=0.019) Scer1 +--(F1=0.013) Sbay1 +----(E2=0.020) Scer2 +----(F2=0.020) Sbay2 YER064C_YIL056Wp.dnd YER064C - - [] - mutation leads to reduction of ERG9 expression YIL056W - - [] - Hypothetical ORF +--------------------------------------------------------------(C=0.314) Kwal +-----------------------------------------(D1=0.210)+-----------------------------(E1=0.150) Scer1 + +------------------------------(F1=0.153) Sbay1 +-----------------------------------------------(D2=0.236)+--------------(E2=0.072) Scer2 + +------------(F2=0.065) Sbay2 YER067W_YIL057Cp.dnd YER067W - - [] - Hypothetical ORF YIL057C - - [] - Hypothetical ORF +------------------------------(D1=0.151)+--------------------------------------(C=0.192) Kwal + +-------------------------------(D2=0.155)+-----(E2=0.027) Scer2 + + +-------(F2=0.040) Sbay2 +------(E1=0.033) Scer1 +------(F1=0.035) Sbay1 YER070W_YIL066Cp.dnd YER070W - RNR1 - [] - ribonucleotide reductase YIL066C - RNR3 - [] - Ribonucleotide reductase (ribonucleoside-diphosphate reductase) large subunit +-----------(D1=0.057)+-------------------------(C=0.128) Kwal + +---------------(D2=0.077)+-----(E2=0.029) Scer2 + + +-------(F2=0.036) Sbay2 +----(E1=0.024) Scer1 +------(F1=0.030) Sbay1 YER081W_YIL074Cp.dnd YER081W - SER3 - [] - 3-phosphoglycerate dehydrogenase YIL074C - SER33 - [] - 3-phosphoglycerate dehydrogenase +----(D2=0.023)+----------------------------(C=0.144) Kwal + +-------(D1=0.040)+--(E1=0.014) Scer1 + + +-----(F1=0.027) Sbay1 +----(E2=0.022) Scer2 +----(F2=0.022) Sbay2 YER129W_YGL179Cp.dnd YER129W - PAK1 - [] - DNA polymerase alpha suppressing protein kinase YGL179C - TOS3 - [] - Hypothetical ORF +------------------------------(D2=0.152)+-------------------------------------------------------------(C=0.308) Kwal + +------------------------------------------(D1=0.214)+---------------------(E1=0.106) Scer1 + + +---------------------(F1=0.106) Sbay1 +-----------------------------(E2=0.150) Scer2 +---------------------------(F2=0.139) Sbay2 YER131W_YGL189Cp.dnd Incorrect topology probable. Skipped YER131W_YGL189Cp.dnd YER131W - RPS26B - [] - Ribosomal protein S26B YGL189C - RPS26A - [] - Ribosomal protein S26A +(?=0.000)+--------------------(C=0.101) Kwal + +-(F2=0.008) Sbay2 +---(D1=0.017)+(E1=0.000) Scer1 + +------(F1=0.034) Sbay1 +(E2=0.000) Scer2 YER132C_YGL197Wp.dnd YER132C - PMD1 - [] - negative regulator of early meiotic gene expression YGL197W - MDS3 - [] - negative regulator of early meiotic genes +------------------------------------(D1=0.180)+----------------------------------------------------------------------------(C=0.385) Kwal + +------------------------------------------(D2=0.210)+-------------(E2=0.069) Scer2 + + +-------------(F2=0.067) Sbay2 +-----------------------(E1=0.117) Scer1 +-----------------------(F1=0.118) Sbay1 YFL004W_YPL019Cp.dnd YFL004W - VTC2 - [] - polyphosphate synthetase (putative) YPL019C - VTC3 - [] - polyphosphate synthetase (putative) +------------------------------------------(C=0.210) Kwal +------------------------------(D1=0.151)+------------(E1=0.065) Scer1 + +-----------(F1=0.055) Sbay1 +----------------------------(D2=0.143)+--------------(E2=0.070) Scer2 + +---------------(F2=0.076) Sbay2 YFL042C_YLR072Wp.dnd YFL042C - - [] - Due to a sequence change (deletion of G at 46151), YFL043C is now part of YFL042C. YLR072W - - [] - Hypothetical ORF +--------------------------------------------------(D1=0.250)+----------------------------------------------------------------(C=0.321) Kwal + +------------------------------------------------------(D2=0.273)+-------------------(E2=0.096) Scer2 + + +--------------------(F2=0.101) Sbay2 +--------------------(E1=0.103) Scer1 +-------------------(F1=0.096) Sbay1 YFL048C_YLR080Wp.dnd YFL048C - EMP47 - [] - 47 kDa type I transmembrane protein localized to the Golgi YLR080W - EMP46 - [] - Hypothetical ORF +---------------------------------------------------(C=0.256) Kwal +--------------------------------(D1=0.163)+-------------------(E1=0.097) Scer1 + +-----------------(F1=0.089) Sbay1 +------------------------------------------(D2=0.214)+----------------------(E2=0.110) Scer2 + +---------------------(F2=0.107) Sbay2 YFR012W_YOL019Wp.dnd YFR012W - - [] - Hypothetical ORF YOL019W - TOS7 - [] - Hypothetical ORF +---------------------------(D1=0.138)+----------------------------------------------------------------------------(C=0.382) Kwal + +---------------------------------------------------(D2=0.257)+---------------------(E2=0.107) Scer2 + + +------------------------(F2=0.123) Sbay2 +---------------------------------------------------(E1=0.257) Scer1 +--------------------------------------------------------(F1=0.283) Sbay1 YFR013W_YOL017Wp.dnd YFR013W - IOC3 - [] - ISWI One Complex YOL017W - ESC8 - [] - Hypothetical ORF +--------------------------------------------(D1=0.225)+----------------------------------------------------------------(C=0.325) Kwal + +-----------------------------------------------(D2=0.235)+-----------------------------------------(E2=0.207) Scer2 + + +----------------------------------------(F2=0.202) Sbay2 +------------------(E1=0.094) Scer1 +-----------------(F1=0.088) Sbay1 YFR014C_YOL016Cp.dnd YFR014C - CMK1 - [] - Calmodulin-dependent protein kinase YOL016C - CMK2 - [] - Calmodulin-dependent protein kinase +----------------------------(D2=0.140)+-----------------------------------(C=0.179) Kwal + +--------------------------------------(D1=0.190)+----------------(E1=0.082) Scer1 + + +------------(F1=0.064) Sbay1 +---------(E2=0.046) Scer2 +---------(F2=0.048) Sbay2 YFR015C_YLR258Wp.dnd YFR015C - GSY1 - [] - Glycogen synthase (UDP-gluocse--starch glucosyltransferase) YLR258W - GSY2 - [] - Glycogen synthase (UDP-gluocse--starch glucosyltransferase) +------------(D1=0.063)+-----------------------------(C=0.146) Kwal + +-------------(D2=0.070)+-----(E2=0.025) Scer2 + + +--(F2=0.010) Sbay2 +----(E1=0.025) Scer1 +-----(F1=0.029) Sbay1 YFR023W_YHR015Wp.dnd YFR023W - PES4 - [] - poly(A) binding protein; related to PES4 protein homolog YHR015w YHR015W - MIP6 - [] - PolyA-binding protein +--------------------------------(D2=0.160)+-----------------------------------------------------------(C=0.296) Kwal + +--------------------------------------------------(D1=0.253)+---------(E1=0.050) Scer1 + + +----------(F1=0.055) Sbay1 +--------------------------------(E2=0.161) Scer2 +-------------------------------(F2=0.155) Sbay2 YFR039C_YGL228Wp.dnd YFR039C - - [] - Hypothetical ORF YGL228W - SHE10 - [] - lethal when overexpressed +------------------------------------------------------(D2=0.272)+--------------------------------------------------------------------------------(C=0.403) Kwal + +------------------------------------------------------(D1=0.275)+------------------------------(E1=0.152) Scer1 + + +---------------------------(F1=0.137) Sbay1 +-----------------------(E2=0.116) Scer2 +-------------------------(F2=0.127) Sbay2 YFR040W_YGL229Cp.dnd YFR040W - SAP155 - [] - cell cycle protein, interacts with Sit4 YGL229C - SAP4 - [] - Sit4 protein phosphatase-associated protein +------------------------------(D1=0.151)+---------------------------------------------(C=0.228) Kwal + +------------------------------------------------(D2=0.241)+------------------------(E2=0.125) Scer2 + + +-----------------------(F2=0.119) Sbay2 +---------------(E1=0.078) Scer1 +---------(F1=0.049) Sbay1 YFR053C_YGL253Wp.dnd YFR053C - HXK1 - [] - Hexokinase I (PI) (also called Hexokinase A) YGL253W - HXK2 - [] - Hexokinase II (PII) (also called Hexokinase B) +----------------(D1=0.080)+-------------------------------(C=0.157) Kwal + +-----------------(D2=0.087)+----(E2=0.023) Scer2 + + +------(F2=0.031) Sbay2 +------(E1=0.035) Scer1 +-----(F1=0.029) Sbay1 YGL031C_YGR148Cp.dnd Incorrect topology probable. Skipped YGL031C_YGR148Cp.dnd YGL031C - RPL24A - [] - Ribosomal protein L24A (rp29) (YL21) (L30A) YGR148C - RPL24B - [] - Ribosomal protein L24B (rp29) (YL21) (L30B) +---------------------(C=0.109) Kwal +-(?=0.006)+--(E1=0.010) Scer1 + +------(?=0.035)+-(F1=0.008) Sbay1 + + +--(F2=0.012) Sbay2 +----(E2=0.020) Scer2 YGL049C_YGR162Wp.dnd YGL049C - TIF4632 - [] - TIF4632 encodes one of two homologs of eIF-4G, the 150 kD subunit of the mRNA cap-binding complex (eIF-4F) YGR162W - TIF4631 - [] - mRNA cap-binding protein (eIF-4F), 150K subunit , highly homologous to Tif4632p, homologs of mammalian p220 +-----------------------------------------------------------(C=0.297) Kwal +---------------------------------(D1=0.169)+-------------------(E1=0.098) Scer1 + +---------------------(F1=0.109) Sbay1 +----------------------------(D2=0.141)+----------------(E2=0.084) Scer2 + +------------------(F2=0.093) Sbay2 YGL063W_YPL212Cp.dnd YGL063W - PUS2 - [] - pseudouridine synthase 2 YPL212C - PUS1 - [] - intranuclear protein which exhibits a nucleotide-specific intron-dependent tRNA pseudouridine synthase activity +---------------------(D2=0.110)+---------------------------------(C=0.167) Kwal + +----------------------------------------------------------(D1=0.293)+-----------------------(E1=0.118) Scer1 + + +-------------------------(F1=0.128) Sbay1 +------------(E2=0.062) Scer2 +-----------(F2=0.055) Sbay2 YGL071W_YPL202Cp.dnd YGL071W - RCS1 - [] - Putative transcription factor that binds the consensus site PyPuCACCCPu YPL202C - AFT2 - [] - Activator of Iron (Fe) Transcription +------------------------------------------------------------------------(C=0.360) Kwal +-----------------------------------------------------------(D1=0.300)+-------(E1=0.036) Scer1 + +---------------------------------(F1=0.169) Sbay1 +----------------------------------------------(D2=0.230)+-----------------------(E2=0.116) Scer2 + +------------------------(F2=0.122) Sbay2 YGL082W_YPL191Cp.dnd YGL082W - - [] - Hypothetical ORF YPL191C - - [] - Hypothetical ORF +-------------------------------(D2=0.159)+----------------------------------------------(C=0.235) Kwal + +---------------------------------(D1=0.169)+------------(E1=0.063) Scer1 + + +-------------(F1=0.068) Sbay1 +----------------------------------(E2=0.171) Scer2 +---------------------------------(F2=0.166) Sbay2 YGL084C_YPL189Wp.dnd YGL084C - GUP1 - [] - putative glycerol transporter YPL189W - GUP2 - [] - Putative active glycerol transporter +---------------------(D1=0.110)+--------------------------------------(C=0.194) Kwal + +----------------------------------(D2=0.171)+---------------------(E2=0.107) Scer2 + + +-------------------(F2=0.097) Sbay2 +----------(E1=0.053) Scer1 +----------(F1=0.054) Sbay1 YGL089C_YPL187Wp.dnd YGL089C - MF(ALPHA)2 - [] - alpha mating factor YPL187W - MF(ALPHA)1 - [] - mating factor alpha +--------------------------------------------------------------------(C=0.342) Kwal +----------------(D1=0.080)+-------------------------(E1=0.127) Scer1 + +-----------------(F1=0.090) Sbay1 +-----------(D2=0.058)+-------------(E2=0.068) Scer2 + +------------------------(F2=0.120) Sbay2 YGL096W_YPL177Cp.dnd YGL096W - TOS8 - [] - Hypothetical ORF YPL177C - CUP9 - [] - putative DNA binding protein which shows similarity in homeobox domain to human proto-oncogene PBX1 +-------------------------------(D2=0.158)+------------------------------------------------------------(C=0.305) Kwal + +-----------------------------------------------(D1=0.236)+------------------------------------(E1=0.181) Scer1 + + +--------------------------------------(F1=0.191) Sbay1 +---------------------------(E2=0.138) Scer2 +-----------------------------(F2=0.149) Sbay2 YGL133W_YPL216Wp.dnd YGL133W - ITC1 - [] - A subunit of Isw2 chromatin remodeling complex YPL216W - - [] - Hypothetical ORF +-----------------------------------------------------------------(C=0.330) Kwal +----------------------------------(D1=0.171)+--------------------(E1=0.103) Scer1 + +---------------------(F1=0.108) Sbay1 +---------------------------------------(D2=0.195)+-------------------------------------------------(E2=0.248) Scer2 + +-----------------------------------------------(F2=0.236) Sbay2 YGL134W_YPL219Wp.dnd YGL134W - PCL10 - [] - PHO85 cyclin YPL219W - PCL8 - [] - cyclin (Pho85p) +-----------------------------------(D1=0.179)+-------------------------------------------------------------------------------(C=0.395) Kwal + +------------------------------------------------------(D2=0.273)+-------------(E2=0.068) Scer2 + + +-------------(F2=0.066) Sbay2 +-----------------------------(E1=0.150) Scer1 +------------------------------(F1=0.153) Sbay1 YGL135W_YPL220Wp.dnd conversion topology probable. Skipped YGL135W_YPL220Wp.dnd YGL135W - RPL1B - [] - Ribosomal protein L1B YPL220W - RPL1A - [] - Ribosomal protein L1A, forms part of the 60S ribosomal subunit +-------------(C=0.069) Kwal +-(?=0.009)+(E1=0.000) Scer1 + +(E2=0.000) Scer2 +--(?=0.014)+(F1=0.000) Sbay1 + +(F2=0.000) Sbay2 YGL139W_YPL221Wp.dnd YGL139W - - [] - Hypothetical ORF YPL221W - BOP1 - [] - Bypass of PAM1 +-------------------------(D2=0.127)+-----------------------------------------------(C=0.238) Kwal + +----------------------------(D1=0.141)+----------(E1=0.054) Scer1 + + +----------(F1=0.051) Sbay1 +--------(E2=0.044) Scer2 +-----------(F2=0.059) Sbay2 YGL158W_YLR248Wp.dnd YGL158W - RCK1 - [] - Serine/threonine protein kinase YLR248W - RCK2 - [] - Serine/threonine protein kinase +--------------------------------(D1=0.164)+-------------------------------------------------(C=0.249) Kwal + +-----------------------------------(D2=0.180)+-----------(E2=0.057) Scer2 + + +--------------(F2=0.075) Sbay2 +-----------------------------------(E1=0.179) Scer1 +----------------------------------------(F1=0.204) Sbay1 YGL162W_YPR009Wp.dnd YGL162W - SUT1 - [] - hypoxic gene family involved in sterol transport YPR009W - SUT2 - [] - Involved in sterol uptake; homologous to SUT1 +-----------------------------------------------------------------------------------(C=0.416) Kwal +-----------------------------------------(D1=0.208)+------------------------(E1=0.120) Scer1 + +--------------------------(F1=0.131) Sbay1 +---------------------------------------------(D2=0.226)+-----------------------(E2=0.116) Scer2 + +----------------------(F2=0.112) Sbay2 YGL166W_YPR008Wp.dnd YGL166W - CUP2 - [] - Activator of transcription YPR008W - HAA1 - [] - Homolog of Ace1 Activator +------------------------------------(D1=0.184)+------------------------------------------------------------------(C=0.335) Kwal + +----------------------------------------------------(D2=0.261)+------------------(E2=0.092) Scer2 + + +-----------------(F2=0.088) Sbay2 +----------------------------(E1=0.143) Scer1 +-----------------------------(F1=0.146) Sbay1 YGR004W_YLR324Wp.dnd YGR004W - - [] - Hypothetical ORF YLR324W - - [] - Hypothetical ORF +----------------------------------------(D2=0.200)+------------------------------------------------(C=0.244) Kwal + +----------------------------------------------(D1=0.231)+----------------(E1=0.083) Scer1 + + +----------------(F1=0.082) Sbay1 +-------------(E2=0.069) Scer2 +------------(F2=0.060) Sbay2 YGR008C_YLR327Cp.dnd YGR008C - STF2 - [] - ATPase stabilizing factor YLR327C - - [] - Hypothetical ORF +---------------------(D2=0.106)+------------------------------------------------------(C=0.271) Kwal + +-----------------------(D1=0.116)+--------(E1=0.042) Scer1 + + +-----(F1=0.030) Sbay1 +---------------(E2=0.076) Scer2 +----------(F2=0.052) Sbay2 YGR010W_YLR328Wp.dnd YGR010W - NMA2 - [] - nicotinic acid mononucleotide adenylyltransferase YLR328W - NMA1 - [] - nicotinic acid mononucleotide adenylyltransferase +------------------------------(C=0.155) Kwal +----------------------(D1=0.114)+--(E1=0.012) Scer1 + +---(F1=0.016) Sbay1 +--------------(D2=0.070)+------(E2=0.032) Scer2 + +------(F2=0.031) Sbay2 YGR027C_YLR333Cp.dnd Incorrect topology probable. Skipped YGR027C_YLR333Cp.dnd YGR027C - RPS25A - [] - Ribosomal protein S25A (S31A) (rp45) (YS23) YLR333C - RPS25B - [] - Ribosomal protein S25B (S31B) (rp45) (YS23) +-----------------------------(C=0.150) Kwal +(?=0.000)+(E1=0.000) Scer1 + +(D2=0.005)+(E2=0.005) Scer2 + + +(F2=0.005) Sbay2 +(F1=0.000) Sbay1 YGR038W_YLR350Wp.dnd YGR038W - ORM1 - [] - Product of gene unknown YLR350W - ORM2 - [] - Endoplasmic reticulum membrane-anchored protein +----------------------------(C=0.141) Kwal +---------------(D1=0.079)+--------(E1=0.042) Scer1 + +----------(F1=0.053) Sbay1 +-----------------------------(D2=0.147)+----------(E2=0.051) Scer2 + +---------(F2=0.046) Sbay2 YGR041W_YLR353Wp.dnd YGR041W - BUD9 - [] - involved in bud-site selection YLR353W - BUD8 - [] - involved in bud site selection +---------------------------------------------------------------------------------(C=0.407) Kwal +-------------------------(D1=0.126)+----------------------------------------------------(E1=0.261) Scer1 + +-----------------------------------------(F1=0.209) Sbay1 +------------------------------------------(D2=0.213)+-------------------------------(E2=0.158) Scer2 + +---------------------------------(F2=0.166) Sbay2 YGR043C_YLR354Cp.dnd YGR043C - - [] - Hypothetical ORF YLR354C - TAL1 - [] - Transaldolase, enzyme in the pentose phosphate pathway +---------------(D2=0.076)+------------------------(C=0.123) Kwal + +-------------------------------(D1=0.157)+---------(E1=0.050) Scer1 + + +-----------(F1=0.056) Sbay1 +------(E2=0.033) Scer2 +-------(F2=0.035) Sbay2 YGR070W_YLR371Wp.dnd YGR070W - ROM1 - [] - Rho1 GDP/GTP exchange protein YLR371W - ROM2 - [] - GDP-GTP Exchange Protein (GEP) for Rho1p +-------------------------------------(C=0.189) Kwal +-----------------------------------------------(D1=0.238)+-------------------------(E1=0.127) Scer1 + +---------------------(F1=0.108) Sbay1 +-----------------------(D2=0.119)+--------(E2=0.043) Scer2 + +---------(F2=0.048) Sbay2 YGR085C_YPR102Cp.dnd conversion topology probable. Skipped YGR085C_YPR102Cp.dnd YGR085C - RPL11B - [] - 60S ribosomal protein L11B (L16B) (rp39B) (YL22) YPR102C - RPL11A - [] - Ribosomal protein L11A (L16A) (rp39A) (YL22) +---------------------(C=0.106) Kwal +-(?=0.009)+-(E1=0.006) Scer1 + +(E2=0.000) Scer2 +--(?=0.014)+(F1=0.000) Sbay1 + +(F2=0.000) Sbay2 YGR109C_YPR120Cp.dnd YGR109C - CLB6 - [] - B-type cyclin YPR120C - CLB5 - [] - B-type cyclin +----------------------------------------------------------(C=0.293) Kwal +---------------------------------------(D1=0.196)+-----------------(E1=0.087) Scer1 + +-----------------(F1=0.087) Sbay1 +---------------------------------(D2=0.166)+------------------(E2=0.093) Scer2 + +----------------------(F2=0.111) Sbay2 YGR131W_YPR149Wp.dnd YGR131W - - [] - Hypothetical ORF YPR149W - NCE102 - [] - Involved in secretion of proteins that lack classical secretory signal sequences +----------------------------------------------------------(C=0.290) Kwal +----------------------(D1=0.112)+---------------------(E1=0.109) Scer1 + +---------------------(F1=0.109) Sbay1 +--------------------(D2=0.105)+--------(E2=0.045) Scer2 + +--------------(F2=0.071) Sbay2 YGR136W_YPR154Wp.dnd YGR136W - LSB1 - [] - YPR154W - PIN3 - [] - +----------------------(D2=0.114)+------------------------------------------------------(C=0.275) Kwal + +-----------------------------(D1=0.147)+--------------------(E1=0.101) Scer1 + + +------------------(F1=0.094) Sbay1 +---------(E2=0.047) Scer2 +--------------------(F2=0.102) Sbay2 YGR141W_YPR157Wp.dnd YGR141W - VPS62 - [] - YPR157W - - [] - Hypothetical ORF +--------------------------(D1=0.131)+-------------------------------------(C=0.185) Kwal + +--------------------------(D2=0.134)+-----------------(E2=0.089) Scer2 + + +---------------(F2=0.080) Sbay2 +--------------(E1=0.074) Scer1 +----------------(F1=0.080) Sbay1 YGR142W_YPR158Wp.dnd YGR142W - BTN2 - [] - Gene/protein whose expression is elevated in a btn1 minus/Btn1p lacking yeast strain. YPR158W - - [] - Hypothetical ORF +---------------------------------------------------------------------------(C=0.379) Kwal +------------------------------(D1=0.152)+---------------------------------(E1=0.165) Scer1 + +-----------------------------------(F1=0.178) Sbay1 +--------------------------------------------------(D2=0.254)+----------------------------------------(E2=0.200) Scer2 + +-------------------------------------(F2=0.188) Sbay2 YGR180C_YJL026Wp.dnd YGR180C - RNR4 - [] - Ribonucleotide Reductase YJL026W - RNR2 - [] - small subunit of ribonucleotide reductase +---------------(D2=0.079)+---------------(C=0.077) Kwal + +---------------------------------------------------------------(D1=0.317)+--------(E1=0.044) Scer1 + + +------------(F1=0.060) Sbay1 +---(E2=0.017) Scer2 +-----(F2=0.026) Sbay2 YGR188C_YJL013Cp.dnd YGR188C - BUB1 - [] - Serine/threonine protein kinase required for cell cycle arrest in response to loss of microtubule function YJL013C - MAD3 - [] - spindle checkpoint complex subunit +-------------------------------------------------(C=0.249) Kwal +-----------------------------------------(D1=0.208)+------------------------(E1=0.122) Scer1 + +----------------------(F1=0.115) Sbay1 +------------------------------------------------------(D2=0.273)+-------------------------------(E2=0.158) Scer2 + +-----------------------------(F2=0.145) Sbay2 YGR209C_YLR043Cp.dnd YGR209C - TRX2 - [] - thioredoxin YLR043C - TRX1 - [] - thioredoxin +------------------------------(C=0.154) Kwal +--------------------(D1=0.103)+--(E1=0.013) Scer1 + +---(F1=0.016) Sbay1 +----------------(D2=0.084)+-----(E2=0.025) Scer2 + +--(F2=0.013) Sbay2 YGR221C_YHR149Cp.dnd YGR221C - TOS2 - [] - Hypothetical ORF YHR149C - - [] - Hypothetical ORF +-----------------------------------(D1=0.180)+------------------------------------------------------------------------(C=0.362) Kwal + +------------------------------------(D2=0.182)+--------------------------(E2=0.134) Scer2 + + +---------------------------------------(F2=0.197) Sbay2 +----------------------------------------------(E1=0.232) Scer1 +-------------------------------------------(F1=0.216) Sbay1 YGR230W_YHR152Wp.dnd YGR230W - BNS1 - [] - similar to Spo12, involved in sporulation YHR152W - SPO12 - [] - 20 kDa protein with negatively charged C-terminus required for function; thought to be a positive regulator of exit from M-phase in mitosis and meiosis. Spo12p interacts with Dbf2p and Dbf20p protein kinases. +-----------------------------(D1=0.150)+--------------------------------------------(C=0.221) Kwal + +-------------------------------------------------------(D2=0.278)+-----------------------(E2=0.120) Scer2 + + +-----------------------(F2=0.120) Sbay2 +----------------------------------------------------(E1=0.261) Scer1 +-----------------------------------(F1=0.177) Sbay1 YGR243W_YHR162Wp.dnd YGR243W - - [] - Hypothetical ORF YHR162W - - [] - Hypothetical ORF +-------------------------------------------------(C=0.246) Kwal +--------------------(D1=0.105)+---------(E1=0.045) Scer1 + +-----------(F1=0.058) Sbay1 +-------------------------(D2=0.126)+----(E2=0.021) Scer2 + +-----(F2=0.026) Sbay2 YGR254W_YHR174Wp.dnd Incorrect topology probable. Skipped YGR254W_YHR174Wp.dnd YGR254W - ENO1 - [] - enolase I YHR174W - ENO2 - [] - enolase +(?=0.005)+-------------------------(C=0.126) Kwal + +---(?=0.017)+---(F1=0.016) Sbay1 + + +---(F2=0.018) Sbay2 +----(E1=0.024) Scer1 +----(E2=0.024) Scer2 YGR256W_YHR183Wp.dnd YGR256W - GND2 - [] - 6-phosphogluconate dehydrogenase YHR183W - GND1 - [] - Phosphogluconate Dehydrogenase (Decarboxylating) +-----------------------(C=0.117) Kwal +------(D1=0.034)+--------(E1=0.041) Scer1 + +---(F1=0.018) Sbay1 +----(D2=0.021)+---(E2=0.019) Scer2 + +----(F2=0.020) Sbay2 YGR273C_YMR295Cp.dnd YGR273C - - [] - Hypothetical ORF YMR295C - - [] - Hypothetical ORF +------------------------------------------------(C=0.241) Kwal +--------------------------------------------------(D1=0.253)+-----------------------(E1=0.119) Scer1 + +--------------------------------(F1=0.163) Sbay1 +------------------------------------(D2=0.185)+-------(E2=0.040) Scer2 + +-----------(F2=0.057) Sbay2 YGR283C_YMR310Cp.dnd YGR283C - - [] - Hypothetical ORF YMR310C - - [] - Hypothetical ORF +---------------------------------------------(D1=0.228)+--------------------------------------------------------------(C=0.311) Kwal + +--------------------------------------------------(D2=0.253)+--------------(E2=0.071) Scer2 + + +-------------(F2=0.068) Sbay2 +-----------------------(E1=0.115) Scer1 +-----------------------(F1=0.119) Sbay1 YHL003C_YKL008Cp.dnd YHL003C - LAG1 - [] - YKL008C YKL008C - LAC1 - [] - Homolog of the LAG1 longevity gene. +-------------------(D1=0.099)+-------------------------------------(C=0.187) Kwal + +----------------------(D2=0.113)+--------(E2=0.044) Scer2 + + +--------(F2=0.042) Sbay2 +----------(E1=0.050) Scer1 +---------(F1=0.045) Sbay1 YHL017W_YKL039Wp.dnd YHL017W - - [] - Hypothetical ORF YKL039W - PTM1 - [] - Putative membrane protein +--------------------------------------------(C=0.224) Kwal +--------------------------------------------(D1=0.221)+----------------(E1=0.083) Scer1 + +-------------------(F1=0.097) Sbay1 +---------------------------(D2=0.137)+-------------(E2=0.066) Scer2 + +--------------(F2=0.070) Sbay2 YHR001W_YKR003Wp.dnd YHR001W - OSH7 - [] - Oxysterol Binding Protein YKR003W - OSH6 - [] - Oxysterol Binding Protein +--------------(D1=0.073)+----------------------------------(C=0.172) Kwal + +-------------------(D2=0.096)+-------------(E2=0.069) Scer2 + + +-----------(F2=0.059) Sbay2 +-------(E1=0.038) Scer1 +---------(F1=0.049) Sbay1 YHR003C_YKL027Wp.dnd YHR003C - - [] - Hypothetical ORF YKL027W - - [] - Hypothetical ORF +----------------------------(D2=0.143)+-------------------------------(C=0.156) Kwal + +------------------------------------------------(D1=0.241)+--------------(E1=0.074) Scer1 + + +-----------------(F1=0.089) Sbay1 +------------(E2=0.062) Scer2 +-------------(F2=0.066) Sbay2 YHR030C_YKL161Cp.dnd YHR030C - SLT2 - [] - serine/threonine MAP kinase YKL161C - - [] - Hypothetical ORF +--------------(D1=0.074)+------------------------(C=0.120) Kwal + +-------------------------------------------(D2=0.218)+----------------------------(E2=0.145) Scer2 + + +------------------------(F2=0.121) Sbay2 +-------(E1=0.038) Scer1 +--------(F1=0.044) Sbay1 YHR117W_YNL121Cp.dnd YHR117W - TOM71 - [] - 71-kDa component of the protein translocase of the outer membrane of mitochondria YNL121C - TOM70 - [] - 70 kDa mitochondrial specialized import receptor of the outer membrane +---------------------------------(C=0.165) Kwal +------------------------------------(D1=0.181)+-------------------(E1=0.099) Scer1 + +------------------(F1=0.093) Sbay1 +---------------------------------(D2=0.167)+------(E2=0.034) Scer2 + +-------(F2=0.039) Sbay2 YHR132W-A_YNL157Wp.dnd YHR132W-A - - [] - Hypothetical ORF YNL157W - - [] - Hypothetical ORF +----------------------------(D1=0.142)+----------------------------------(C=0.172) Kwal + +----------------------------------------------(D2=0.234)+------------(E2=0.062) Scer2 + + +------------(F2=0.064) Sbay2 +-(E1=0.006) Scer1 +-(F1=0.010) Sbay1 YHR133C_YNL156Cp.dnd YHR133C - - [] - Hypothetical ORF YNL156C - - [] - Hypothetical ORF +-------------------------------------(D2=0.188)+-----------------------------------------------(C=0.239) Kwal + +---------------------------------------------------------(D1=0.289)+----------------------(E1=0.112) Scer1 + + +----------------------(F1=0.112) Sbay1 +-------------(E2=0.068) Scer2 +-------------(F2=0.068) Sbay2 YHR139C_YNL160Wp.dnd YHR139C - SPS100 - [] - sporulation-specific wall maturation protein YNL160W - YGP1 - [] - YGP1 encodes gp37, a glycoprotein synthesized in response to nutrient limitation which is homologous to the sporulation-specific SPS100 gene +------------------------------------(D2=0.184)+-------------------------------------------------------------------------------(C=0.395) Kwal + +------------------------------------------(D1=0.213)+-------------(E1=0.068) Scer1 + + +-----------------------(F1=0.116) Sbay1 +----------------(E2=0.084) Scer2 +------------------(F2=0.094) Sbay2 YHR146W_YNL173Cp.dnd YHR146W - CRP1 - [] - Hypothetical ORF YNL173C - MDG1 - [] - Involved in G-protein mediated signal transduction +-----------------------------------------------------------------------(C=0.358) Kwal +--------------------------------------(D1=0.194)+-------------------------------(E1=0.156) Scer1 + +-----------------------------(F1=0.149) Sbay1 +-----------------------------------(D2=0.179)+--------------------------------------(E2=0.191) Scer2 + +-----------------------------------------(F2=0.205) Sbay2 YHR206W_YJR147Wp.dnd YHR206W - SKN7 - [] - transcription factor involved in oxidative stress response YJR147W - HMS2 - [] - heat shock transcription factor homolog +----------------------------------------(D1=0.204)+------------------------------------------------(C=0.240) Kwal + +-----------------------------------------------------------------------(D2=0.355)+---------------------------------------(E2=0.197) Scer2 + + +----------------------------------(F2=0.173) Sbay2 +----------(E1=0.050) Scer1 +--------(F1=0.044) Sbay1 YHR208W_YJR148Wp.dnd YHR208W - BAT1 - [] - branched-chain amino acid transaminase, highly similar to mammalian ECA39, which is regulated by the oncogene myc YJR148W - BAT2 - [] - Branched-Chain Amino Acid Transaminase +---------------------------(C=0.137) Kwal +--------------------(D1=0.101)+-----(E1=0.029) Scer1 + +----(F1=0.022) Sbay1 +---------(D2=0.046)+-----------(E2=0.057) Scer2 + +------------(F2=0.063) Sbay2 YIL085C_YNL029Cp.dnd YIL085C - KTR7 - [] - (putative) mannosyltransferase YNL029C - KTR5 - [] - Putative mannosyltransferase +----------------------------(D2=0.143)+--------------------------------------------------------(C=0.285) Kwal + +------------------------------(D1=0.151)+-----------------(E1=0.090) Scer1 + + +------------------(F1=0.094) Sbay1 +-----------------------(E2=0.116) Scer2 +--------------------(F2=0.101) Sbay2 YIL095W_YNL020Cp.dnd YIL095W - PRK1 - [] - probable serine/threonine-protein kinase YNL020C - ARK1 - [] - Predicted Ser/thr kinase +----------------------------(D2=0.143)+-------------------------------------------------------(C=0.275) Kwal + +-------------------------------(D1=0.158)+-----------------------(E1=0.118) Scer1 + + +---------------------(F1=0.110) Sbay1 +-------------------------------(E2=0.160) Scer2 +--------------------------(F2=0.135) Sbay2 YIL105C_YNL047Cp.dnd YIL105C - - [] - Hypothetical ORF YNL047C - - [] - Hypothetical ORF +-------------------------------(D2=0.157)+--------------------------------------------------------(C=0.282) Kwal + +--------------------------------(D1=0.164)+-------(E1=0.036) Scer1 + + +--------(F1=0.043) Sbay1 +----------------------(E2=0.112) Scer2 +---------------------(F2=0.105) Sbay2 YIL109C_YNL049Cp.dnd YIL109C - SEC24 - [] - vesicle coat component YNL049C - SFB2 - [] - putative zinc finger protein +--------------------------(C=0.131) Kwal +-------------------------(D1=0.126)+----(E1=0.021) Scer1 + +----(F1=0.025) Sbay1 +------------------------------------(D2=0.181)+----------------(E2=0.081) Scer2 + +--------------(F2=0.074) Sbay2 YIL113W_YNL053Wp.dnd YIL113W - - [] - Hypothetical ORF YNL053W - MSG5 - [] - Dual-specificity protein tyrosine phosphatase +-----------------------------------------------------------------(C=0.329) Kwal +------------------(D1=0.090)+-------------------------------(E1=0.156) Scer1 + +-----------------------------(F1=0.148) Sbay1 +-------------------------------------------------(D2=0.247)+---------------------(E2=0.109) Scer2 + +--------------------(F2=0.102) Sbay2 YIL117C_YNL058Cp.dnd YIL117C - PRM5 - [] - YNL058C - - [] - Hypothetical ORF +-----------------------------------(D1=0.175)+------------------------------------------------------------------------(C=0.364) Kwal + +---------------------------------------------------------(D2=0.286)+-----------------(E2=0.086) Scer2 + + +-------------------(F2=0.098) Sbay2 +-------------------------------------(E1=0.188) Scer1 +-----------------------------------------(F1=0.208) Sbay1 YIL123W_YNL066Wp.dnd YIL123W - SIM1 - [] - (putative) invovled in control of DNA replication YNL066W - SUN4 - [] - Protein involved in the aging process +---------------------------------------------------(C=0.255) Kwal +-------------(D1=0.067)+--------------------(E1=0.101) Scer1 + +------------------(F1=0.093) Sbay1 +---------(D2=0.047)+---------------------(E2=0.106) Scer2 + +------------------(F2=0.092) Sbay2 YIL135C_YNL074Cp.dnd YIL135C - - [] - Hypothetical ORF YNL074C - MLF3 - [] - Serine-rich protein +---------------------------------------------------------------------------(C=0.376) Kwal +-------------------------------------------------------------(D1=0.305)+--------------(E1=0.074) Scer1 + +---------------(F1=0.080) Sbay1 +-------------------------------------------------(D2=0.247)+-------------------------(E2=0.127) Scer2 + +--------------------------(F2=0.130) Sbay2 YIL138C_YNL079Cp.dnd YIL138C - TPM2 - [] - Tropomyosin isoform 2 YNL079C - TPM1 - [] - tropomyosin I +--------------------------(D2=0.132)+-------------------------------(C=0.160) Kwal + +----------------------------(D1=0.145)+------(E1=0.031) Scer1 + + +-------(F1=0.037) Sbay1 +--------(E2=0.041) Scer2 +-------(F2=0.040) Sbay2 YIL149C_YKR095Wp.dnd YIL149C - MLP2 - [] - colied-coil protein (putative), similar to myosin and TPR YKR095W - MLP1 - [] - colied-coil protein (putative), similar to myosin and TPR +--------------------------------------(D2=0.192)+--------------------------------------------------------------------(C=0.340) Kwal + +---------------------------------------------(D1=0.228)+------------------------------------(E1=0.182) Scer1 + + +---------------------------------(F1=0.169) Sbay1 +-------------------------(E2=0.129) Scer2 +---------------------------(F2=0.137) Sbay2 YIL151C_YKR096Wp.dnd YIL151C - - [] - Hypothetical ORF YKR096W - - [] - Hypothetical ORF +---------------------------------------------------------(C=0.286) Kwal +---------------------------------------------(D1=0.226)+--------------(E1=0.072) Scer1 + +-------------(F1=0.067) Sbay1 +-------------------------------(D2=0.155)+--------------------(E2=0.100) Scer2 + +-------------------(F2=0.100) Sbay2 YIL156W_YKR098Cp.dnd YIL156W - UBP7 - [] - Ubiquitin-specific protease YKR098C - UBP11 - [] - Ubiquitin-specific protease +-----------------------------------(D2=0.177)+---------------------------------------------------(C=0.257) Kwal + +-------------------------------------(D1=0.185)+---------------(E1=0.078) Scer1 + + +----------------(F1=0.080) Sbay1 +----------------------------(E2=0.142) Scer2 +------------------------(F2=0.122) Sbay2 YIL158W_YKR100Cp.dnd YIL158W - - [] - Hypothetical ORF YKR100C - - [] - Hypothetical ORF +------------------------------------------(D1=0.214)+-------------------------------------------------------------(C=0.305) Kwal + +-----------------------------------------------------(D2=0.265)+------------------------------(E2=0.153) Scer2 + + +-----(F2=0.029) Sbay2 +-----------------------(E1=0.116) Scer1 +-------------------------------(F1=0.158) Sbay1 YIR021W_YKL011Cp.dnd YIR021W - MRS1 - [] - mitochondrial RNA splicing YKL011C - CCE1 - [] - cruciform cutting endonuclease +-------------------------------------------(D2=0.217)+-----------------------------------------------------------------(C=0.330) Kwal + +-----------------------------------------------------------(D1=0.297)+----------------------------------(E1=0.173) Scer1 + + +-------------------------------------(F1=0.188) Sbay1 +-------------------------(E2=0.130) Scer2 +-----------------------(F2=0.119) Sbay2 YIR033W_YKL020Cp.dnd YIR033W - MGA2 - [] - Product of gene unknown YKL020C - SPT23 - [] - suppressor protein +------------------------------------------(D2=0.215)+----------------------------------------------------------------(C=0.324) Kwal + +-------------------------------------------------(D1=0.248)+-------------(E1=0.070) Scer1 + + +-------------(F1=0.066) Sbay1 +---------------------(E2=0.109) Scer2 +--------------------(F2=0.100) Sbay2 YJL045W_YKL148Cp.dnd YJL045W - - [] - Hypothetical ORF YKL148C - SDH1 - [] - flavoprotein subunit of succinate dehydrogenase +-------(D2=0.036)+-----------------------(C=0.115) Kwal + +-------------(D1=0.068)+------(E1=0.034) Scer1 + + +--------(F1=0.040) Sbay1 +-----(E2=0.025) Scer2 +-----(F2=0.028) Sbay2 YJL082W_YKR018Cp.dnd YJL082W - IML2 - [] - Similar to Ykr018p YKR018C - - [] - Hypothetical ORF +-----------------------(D2=0.118)+-----------------------------------------(C=0.206) Kwal + +-----------------------------(D1=0.146)+-------(E1=0.038) Scer1 + + +----------(F1=0.053) Sbay1 +-------(E2=0.035) Scer2 +-------(F2=0.039) Sbay2 YJL098W_YKR028Wp.dnd YJL098W - SAP185 - [] - Sit4p-associated protein YKR028W - SAP190 - [] - Type 2A-related protein phosphatase +-------------------------------(D1=0.160)+------------------------------------------------(C=0.243) Kwal + +------------------------------------------(D2=0.211)+---------------(E2=0.078) Scer2 + + +-----------------------(F2=0.117) Sbay2 +-----------------------(E1=0.119) Scer1 +----------------------(F1=0.114) Sbay1 YJL099W_YKR027Wp.dnd YJL099W - CHS6 - [] - involved in chitin biosynthesis YKR027W - - [] - Hypothetical ORF +---------------------------------(D1=0.169)+-----------------------------------------------------------------(C=0.326) Kwal + +------------------------------------------(D2=0.210)+---------------(E2=0.078) Scer2 + + +------------------(F2=0.092) Sbay2 +----------------------(E1=0.113) Scer1 +-----------------------(F1=0.116) Sbay1 YJL110C_YKR034Wp.dnd YJL110C - GZF3 - [] - GATA zinc finger protein 3 homologous to Dal80 in structure and function YKR034W - DAL80 - [] - negative regulator of multiple nitrogen catabolic genes +------------------------------------------------------------------------------(C=0.394) Kwal +-----------------------------------------(D1=0.206)+--------------------------------(E1=0.161) Scer1 + +------------------------------(F1=0.151) Sbay1 +-------------------------------------------(D2=0.217)+---------(E2=0.049) Scer2 + +-------------(F2=0.066) Sbay2 YJL112W_YKR036Cp.dnd YJL112W - MDV1 - [] - Involved in mitochondrial division YKR036C - CAF4 - [] - component of CCR4 transcriptional complex +---------------------------------------(D1=0.197)+--------------------------------------------------------(C=0.281) Kwal + +-----------------------------------------------(D2=0.236)+-----------------------------(E2=0.147) Scer2 + + +----------------------------(F2=0.141) Sbay2 +-------------------(E1=0.095) Scer1 +-------------------(F1=0.099) Sbay1 YJL116C_YKR042Wp.dnd YJL116C - NCA3 - [] - involved in regulating expression of F0F1 ATPase subunits YKR042W - UTH1 - [] - involved in cell growth +----------------------------------------------(C=0.230) Kwal +--------------------------(D1=0.131)+-------------(E1=0.068) Scer1 + +-------------(F1=0.068) Sbay1 +--------------------(D2=0.104)+-----------(E2=0.059) Scer2 + +---------------(F2=0.076) Sbay2 YJL129C_YKR050Wp.dnd YJL129C - TRK1 - [] - 180 kDa high affinity potassium transporter YKR050W - TRK2 - [] - membrane protein; low affinity potassium transport +-------------------(D2=0.098)+---------------------------------------------------------(C=0.289) Kwal + +--------------------------------(D1=0.163)+--------------------(E1=0.103) Scer1 + + +---------------------(F1=0.109) Sbay1 +------------------------(E2=0.123) Scer2 +-----------------------(F2=0.118) Sbay2 YJL133W_YKR052Cp.dnd YJL133W - MRS3 - [] - mitochondrial carrier protein YKR052C - MRS4 - [] - mitochondrial carrier protein, highly homologous to Mrs3p +--------------------(D2=0.101)+---------------------------------(C=0.169) Kwal + +-------------------------(D1=0.126)+-----(E1=0.027) Scer1 + + +-----(F1=0.027) Sbay1 +---(E2=0.019) Scer2 +------(F2=0.034) Sbay2 YJL134W_YKR053Cp.dnd YJL134W - LCB3 - [] - putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells YKR053C - YSR3 - [] - DHS-1-P phosphatase +----------------------------------------------------------(C=0.292) Kwal +-------------------------------(D1=0.156)+--------------(E1=0.071) Scer1 + +----------------(F1=0.083) Sbay1 +------------------(D2=0.092)+-----------------------------(E2=0.148) Scer2 + +---------------------------(F2=0.137) Sbay2 YJL137C_YKR058Wp.dnd YJL137C - GLG2 - [] - glycogen synthesis initiator YKR058W - GLG1 - [] - glycogen synthesis initiator +---------------------------(D1=0.137)+-----------------------------------------------------------------------(C=0.357) Kwal + +-----------------------------(D2=0.149)+----------------------------------------------------------------(E2=0.321) Scer2 + + +-----------------------------(F2=0.148) Sbay2 +------------------------(E1=0.123) Scer1 +------------------------(F1=0.122) Sbay1 YJL138C_YKR059Wp.dnd conversion topology probable. Skipped YJL138C_YKR059Wp.dnd YJL138C - TIF2 - [] - translation initiation factor eIF4A YKR059W - TIF1 - [] - translation initiation factor eIF4A +---------------------(C=0.106) Kwal +-(?=0.008)+(E1=0.000) Scer1 + +(E2=0.000) Scer2 +---(?=0.015)+(F1=0.004) Sbay1 + +(F2=0.003) Sbay2 YJL139C_YKR061Wp.dnd YJL139C - YUR1 - [] - mannosyltransferase YKR061W - KTR2 - [] - putative mannosyltransferase; type 2 membrane protein +--------------------------------------------(C=0.224) Kwal +---------------------------(D1=0.138)+----------------(E1=0.083) Scer1 + +--------------(F1=0.071) Sbay1 +-----------------(D2=0.089)+--------------(E2=0.075) Scer2 + +------------------(F2=0.090) Sbay2 YJL164C_YKL166Cp.dnd YJL164C - TPK1 - [] - putative catalytic subunit of cAMP-dependent protein kinase YKL166C - TPK3 - [] - cAMP-dependent protein kinase catalytic subunit +------------------(D2=0.094)+-------------------------(C=0.126) Kwal + +--------------------(D1=0.101)+-----------(E1=0.056) Scer1 + + +-------(F1=0.035) Sbay1 +-------(E2=0.036) Scer2 +------(F2=0.034) Sbay2 YJL165C_YKL168Cp.dnd YJL165C - HAL5 - [] - (putative) protein kinase YKL168C - KKQ8 - [] - probable serine/threonine-specific protein kinase (EC 2.7.1.-) +------------------------------------------------------(C=0.274) Kwal +---------------------------------------(D1=0.196)+------------(E1=0.065) Scer1 + +-------------(F1=0.068) Sbay1 +-----------------------------------------(D2=0.209)+--------------------------(E2=0.132) Scer2 + +--------------------------(F2=0.132) Sbay2 YJR054W_YML047Cp.dnd YJR054W - - [] - Hypothetical ORF YML047C - PRM6 - [] - +--------------------------------(D1=0.165)+------------------------------------------------------------(C=0.300) Kwal + +-----------------------------------------------(D2=0.237)+------------------(E2=0.091) Scer2 + + +--------------------(F2=0.102) Sbay2 +---------------------(E1=0.106) Scer1 +----------------------(F1=0.111) Sbay1 YJR061W_YKL201Cp.dnd YJR061W - - [] - Hypothetical ORF YKL201C - MNN4 - [] - involved in mannose metabolism +----------------------------------(D1=0.175)+---------------------------------------------------------------------------(C=0.375) Kwal + +------------------------------------(D2=0.182)+-----------------(E2=0.088) Scer2 + + +------------------(F2=0.093) Sbay2 +--------------------------(E1=0.135) Scer1 +------------------------(F1=0.125) Sbay1 YJR066W_YKL203Cp.dnd YJR066W - TOR1 - [] - phosphatidylinositol kinase homolog YKL203C - TOR2 - [] - phosphatidylinositol kinase homolg +---------------------------(C=0.139) Kwal +------------------------------(D1=0.154)+-------(E1=0.035) Scer1 + +------(F1=0.034) Sbay1 +-----------------------(D2=0.116)+-----(E2=0.027) Scer2 + +-----(F2=0.028) Sbay2 YJR127C_YML081Wp.dnd YJR127C - ZMS1 - [] - Product of gene unknown YML081W - - [] - Hypothetical ORF +----------------------------------------(D2=0.203)+----------------------------------------------------(C=0.261) Kwal + +--------------------------------------------(D1=0.223)+---------------------(E1=0.108) Scer1 + + +---------------------(F1=0.107) Sbay1 +---------------(E2=0.079) Scer2 +----------------(F2=0.084) Sbay2 YJR130C_YML082Wp.dnd YJR130C - STR2 - [] - Cystathionine gamma-synthase YML082W - - [] - Hypothetical ORF +-----------------------------------------(C=0.209) Kwal +---------------------------(D1=0.135)+----------(E1=0.052) Scer1 + +----------(F1=0.053) Sbay1 +-------------------------------------------(D2=0.217)+---------(E2=0.045) Scer2 + +--------(F2=0.044) Sbay2 YKL032C_YMR072Wp.dnd YKL032C - IXR1 - [] - intrastrand crosslink recognition protein YMR072W - ABF2 - [] - HMG-1 homolog, mitochondrial +---------------------------------------(D1=0.199)+--------------------------------------------------------(C=0.285) Kwal + +----------------------------------------------------------(D2=0.291)+------------------(E2=0.095) Scer2 + + +---------------------(F2=0.107) Sbay2 +-----------------(E1=0.087) Scer1 +-------------------(F1=0.099) Sbay1 YKL043W_YMR016Cp.dnd YKL043W - PHD1 - [] - putative transcription factor YMR016C - SOK2 - [] - displays homologies to several transcription factors +-------------------------------------------------------------------------------(C=0.399) Kwal +--------------------------------(D1=0.165)+---------------------------------(E1=0.166) Scer1 + +--------------------------(F1=0.134) Sbay1 +-----------------------------------(D2=0.179)+-----------------------------(E2=0.149) Scer2 + +--------------------------------(F2=0.162) Sbay2 YKL050C_YMR031Cp.dnd YKL050C - - [] - Hypothetical ORF YMR031C - - [] - Hypothetical ORF +---------------------------------------(D2=0.195)+-------------------------------------------------------------------------(C=0.367) Kwal + +--------------------------------------------(D1=0.223)+-----------------------------------------(E1=0.206) Scer1 + + +---------------------------------------(F1=0.197) Sbay1 +-------------------------(E2=0.126) Scer2 +-------------------------(F2=0.125) Sbay2 YKL062W_YMR037Cp.dnd YKL062W - MSN4 - [] - zinc finger protein YMR037C - MSN2 - [] - zinc finger protein +--------------------------------------------------(D1=0.255)+----------------------------------------------------------------------------------------(C=0.442) Kwal + +----------------------------------------------------(D2=0.260)+-----------------(E2=0.090) Scer2 + + +--------(F2=0.045) Sbay2 +----------------------(E1=0.111) Scer1 +--------------------(F1=0.100) Sbay1 YKL065C_YMR040Wp.dnd YKL065C - YET1 - [] - Yeast endoplasmic reticulum 25 kDa transmembrane protein YMR040W - - [] - Hypothetical ORF +---------------------------(D2=0.136)+---------------------------------------------------------(C=0.289) Kwal + +--------------------------------(D1=0.165)+-----------(E1=0.057) Scer1 + + +----------(F1=0.054) Sbay1 +---------------------(E2=0.108) Scer2 +----------------------(F2=0.114) Sbay2 YKL068W_YMR047Cp.dnd YKL068W - NUP100 - [] - Nuclear pore complex protein homologous to Nup116p YMR047C - NUP116 - [] - Nuclear pore complex protein that is member of GLFG repeat-containing family of nucleoporins and is highly homologous to Nup100p +----------------------------------------------------------(C=0.292) Kwal +------------------------------------------(D1=0.213)+--------------------------(E1=0.134) Scer1 + +-----------------------------(F1=0.147) Sbay1 +-----------------------------------------(D2=0.207)+-----------------------(E2=0.118) Scer2 + +------------------------(F2=0.122) Sbay2 YKL072W_YMR053Cp.dnd YKL072W - STB6 - [] - involved in transcription YMR053C - STB2 - [] - Sin3p binding protein +-------------------------------------(D2=0.190)+-------------------------------------------------------------------------(C=0.366) Kwal + +---------------------------------------(D1=0.199)+-------------(E1=0.070) Scer1 + + +--------------(F1=0.070) Sbay1 +----------------(E2=0.081) Scer2 +-----------------(F2=0.088) Sbay2 YKL121W_YMR102Cp.dnd YKL121W - - [] - Hypothetical ORF YMR102C - - [] - Hypothetical ORF +-------------------------------------------------------------------(C=0.338) Kwal +-----------------------------------------------(D1=0.237)+--------------------(E1=0.104) Scer1 + +------------------(F1=0.094) Sbay1 +-----------------------------------------(D2=0.209)+-------------(E2=0.069) Scer2 + +--------------(F2=0.074) Sbay2 YKL126W_YMR104Cp.dnd YKL126W - YPK1 - [] - 76.5 kDa Serine/threonine protein kinase with similarity to protein kinase C, is 90% identical to Ypk2p YMR104C - YPK2 - [] - protein kinase +---------------------(D1=0.106)+------------------------------------(C=0.182) Kwal + +------------------------(D2=0.123)+--------------(E2=0.073) Scer2 + + +-------------------(F2=0.100) Sbay2 +-----(E1=0.028) Scer1 +--(F1=0.012) Sbay1 YKL127W_YMR105Cp.dnd YKL127W - PGM1 - [] - phosphoglucomutase, minor isoform YMR105C - PGM2 - [] - Phosphoglucomutase +----------(D2=0.053)+-----------------------------(C=0.149) Kwal + +-----------(D1=0.059)+------------(E1=0.062) Scer1 + + +---------(F1=0.049) Sbay1 +------(E2=0.034) Scer2 +--------(F2=0.043) Sbay2 YKL132C_YMR113Wp.dnd YKL132C - RMA1 - [] - probable folyl-polyglutamate synthetase YMR113W - FOL3 - [] - dihydrofolate synthetase +------------------------(D2=0.123)+-----------------------------------------------------(C=0.266) Kwal + +-----------------------------------------(D1=0.207)+-------------------------------(E1=0.157) Scer1 + + +---------------------------(F1=0.136) Sbay1 +-----------------(E2=0.089) Scer2 +-----------------(F2=0.090) Sbay2 YKL133C_YMR115Wp.dnd YKL133C - - [] - Hypothetical ORF YMR115W - - [] - Hypothetical ORF +-------------------------------------------------(C=0.250) Kwal +---------------------------------------------------(D1=0.257)+--------------------------------(E1=0.162) Scer1 + +--------------------------------(F1=0.164) Sbay1 +--------------------------------------(D2=0.192)+---------------(E2=0.080) Scer2 + +-----------------(F2=0.086) Sbay2 YKR072C_YOR054Cp.dnd YKR072C - SIS2 - [] - sit4 suppressor YOR054C - - [] - Hypothetical ORF +------------------------------------------------------(C=0.272) Kwal +----------------------------------(D1=0.174)+-------------------(E1=0.098) Scer1 + +------------------(F1=0.094) Sbay1 +--------------------------(D2=0.135)+-------------------------(E2=0.126) Scer2 + +-------------------------(F2=0.129) Sbay2 YKR075C_YOR062Cp.dnd YKR075C - - [] - Hypothetical ORF YOR062C - - [] - Hypothetical ORF +--------------------------------------------------------------------(C=0.340) Kwal +---------------------------------(D1=0.167)+-------------------------(E1=0.126) Scer1 + +------------------------(F1=0.122) Sbay1 +--------------------------------(D2=0.164)+---------------------------(E2=0.138) Scer2 + +---------------------------------(F2=0.169) Sbay2 YKR077W_YOR066Wp.dnd YKR077W - - [] - Hypothetical ORF YOR066W - - [] - Hypothetical ORF +--------------------------------------------(D2=0.222)+---------------------------------------------------------------------------(C=0.376) Kwal + +-------------------------------------------------------------------(D1=0.338)+------------------(E1=0.091) Scer1 + + +------------------------(F1=0.121) Sbay1 +-------------------------(E2=0.127) Scer2 +------------------(F2=0.094) Sbay2 YKR078W_YOR069Wp.dnd YKR078W - - [] - Hypothetical ORF YOR069W - VPS5 - [] - Sorting nexin I homologue +-------------------------------(D2=0.157)+----------------------------------------------------(C=0.264) Kwal + +---------------------------------------------------------------------------------(D1=0.407)+----------------------------(E1=0.142) Scer1 + + +----------------------(F1=0.111) Sbay1 +---------(E2=0.045) Scer2 +----------------------(F2=0.112) Sbay2 YKR084C_YOR076Cp.dnd YKR084C - HBS1 - [] - Protein related to translation elongation factor EF-1alpha and to Suf12p/Sup2p/Gst1p/Sup35p YOR076C - SKI7 - [] - +----------------------------------------(D1=0.200)+------------------------------------------------(C=0.242) Kwal + +------------------------------------------------------------------------(D2=0.362)+---------------------------------(E2=0.167) Scer2 + + +-------------------------------------(F2=0.186) Sbay2 +----------------(E1=0.085) Scer1 +----------------(F1=0.084) Sbay1 YLL016W_YLR310Cp.dnd YLL016W - SDC25 - [] - GDP/GTP exchange factor for Ras YLR310C - CDC25 - [] - regulatory protein of adenylate cyclase +--------------------------------------(D1=0.193)+-----------------------------------------------------------------------(C=0.357) Kwal + +------------------------------------------------(D2=0.242)+-------------(E2=0.066) Scer2 + + +--------------(F2=0.074) Sbay2 +--------------------------(E1=0.131) Scer1 +----------------------------(F1=0.145) Sbay1 YLL021W_YLR313Cp.dnd YLL021W - SPA2 - [] - spindle pole antigen YLR313C - SPH1 - [] - homologous to Spa2p, localizes to sites of polarized growth +--------------------------------------------------------------------------(C=0.372) Kwal +---------------------------------(D1=0.170)+-----------------------------------(E1=0.177) Scer1 + +--------------------------------------(F1=0.195) Sbay1 +-------------------------------(D2=0.157)+---------------------------------------------------(E2=0.255) Scer2 + +-----------------------------------------------(F2=0.239) Sbay2 YLR028C_YMR120Cp.dnd YLR028C - ADE16 - [] - 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase/IMP cyclohydrolase YMR120C - ADE17 - [] - 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase/IMP cyclohydrolase +--------(D2=0.041)+----------(C=0.052) Kwal + +---------------(D1=0.079)+--(E1=0.015) Scer1 + + +--(F1=0.014) Sbay1 +---(E2=0.016) Scer2 +--(F2=0.012) Sbay2 YLR029C_YMR121Cp.dnd Incorrect topology probable. Skipped YLR029C_YMR121Cp.dnd YLR029C - RPL15A - [] - Ribosomal protein L15A (YL10) (rp15R) (L13A) YMR121C - RPL15B - [] - Ribosomal protein L15B (YL10) (L13B) (rp15R) +(?=0.002)+-----------(C=0.057) Kwal + +--(?=0.013)+(F1=-0.001) Sbay1 + + +--(F2=0.011) Sbay2 +(E1=0.005) Scer1 +(E2=0.005) Scer2 YLR249W_YNL014Wp.dnd YLR249W - YEF3 - [] - EF-3 (translational elongation factor 3) YNL014W - HEF3 - [] - +-----------(D2=0.055)+----------------(C=0.083) Kwal + +-----------(D1=0.059)+----(E1=0.020) Scer1 + + +------(F1=0.030) Sbay1 +-----(E2=0.025) Scer2 +------(F2=0.032) Sbay2 YLR260W_YOR171Cp.dnd YLR260W - LCB5 - [] - sphingoid long chain base (LCB) kinase YOR171C - LCB4 - [] - sphingoid long chain base (LCB) kinase +--------------------------(D1=0.132)+--------------------------------------------(C=0.221) Kwal + +----------------------------------(D2=0.173)+--------------(E2=0.074) Scer2 + + +----------------(F2=0.081) Sbay2 +---------------(E1=0.077) Scer1 +----------------(F1=0.085) Sbay1 YLR264W_YOR167Cp.dnd Incorrect topology probable. Skipped YLR264W_YOR167Cp.dnd YLR264W - RPS28B - [] - Ribosomal protein S28B (S33B) (YS27) YOR167C - RPS28A - [] - Ribosomal protein S28A (S33A) (YS27) +-(?=0.007)+-(?=0.007)+--(C=0.015) Kwal + + +(E1=0.000) Scer1 + +-(E2=0.007) Scer2 +-(F1=0.007) Sbay1 +-(F2=0.007) Sbay2 YLR270W_YOR173Wp.dnd YLR270W - - [] - trehalase-associated protein YOR173W - - [] - Hypothetical ORF +-------------------------------------------(C=0.217) Kwal +--------------------(D1=0.105)+-(E1=0.008) Scer1 + +--(F1=0.012) Sbay1 +------------------------------------(D2=0.184)+--------(E2=0.040) Scer2 + +-----(F2=0.028) Sbay2 YLR277C_YOR179Cp.dnd YLR277C - YSH1 - [] - subunit of Polyadenylation factor I (PF I) YOR179C - - [] - Hypothetical ORF +-------------------(D1=0.095)+--------------------------(C=0.134) Kwal + +--------------------------------------------------------------(D2=0.312)+-------------------------------------(E2=0.186) Scer2 + + +---------------------------------(F2=0.169) Sbay2 +---------(E1=0.048) Scer1 +----------(F1=0.050) Sbay1 YLR284C_YOR180Cp.dnd YLR284C - ECI1 - [] - Peroxisomal d3,d2-Enoyl-CoA Isomerase YOR180C - DCI1 - [] - Peroxisomal delta(3,5)-delta(2,4)-dienoyl-CoA isomerase +----------------------------------(D1=0.171)+---------------------------------------------------(C=0.258) Kwal + +---------------------------------------(D2=0.198)+-----------------(E2=0.086) Scer2 + + +------------------(F2=0.095) Sbay2 +------------------(E1=0.095) Scer1 +--------------(F1=0.074) Sbay1 YLR293C_YOR185Cp.dnd YLR293C - GSP1 - [] - GTP-binding protein YOR185C - GSP2 - [] - GTP binding protein, almost identical to Gsp1p +--(D2=0.014)+-----(C=0.028) Kwal + +---(D1=0.018)+(E1=0.000) Scer1 + + +(F1=0.000) Sbay1 +-(E2=0.009) Scer2 +(F2=0.005) Sbay2 YLR433C_YML057Wp.dnd YLR433C - CNA1 - [] - Calcineurin subunit A; type 2B protein serine/threonine phosphatase catalytic subunit A1; cytoplasmic YML057W - CMP2 - [] - Catalytic A subunit of calcineurin, type 2B protein serine/threonine phosphatase; redundant with Cna1; cytoplasmic +---------------------------------(C=0.169) Kwal +----------------------------(D1=0.143)+--------(E1=0.045) Scer1 + +---------(F1=0.048) Sbay1 +--------------------------(D2=0.131)+------(E2=0.034) Scer2 + +------(F2=0.034) Sbay2 YLR437C_YML058Wp.dnd YLR437C - - [] - Hypothetical ORF YML058W - SML1 - [] - Suppressor of mec lethality +---------------------------------------------------------------(C=0.318) Kwal +--------------------------------------------------------------------------------(D1=0.405)+--------(E1=0.041) Scer1 + +--------(F1=0.041) Sbay1 +------------------------------------------------------------------------(D2=0.364)+-----------(E2=0.057) Scer2 + +-------(F2=0.039) Sbay2 YLR441C_YML063Wp.dnd Incorrect topology probable. Skipped YLR441C_YML063Wp.dnd YLR441C - RPS1A - [] - Ribosomal protein S1A (rp10A) YML063W - RPS1B - [] - Ribosomal protein S1B (rp10B) +-(?=0.006)+----------------(C=0.082) Kwal + +(E2=0.004) Scer2 +---(D1=0.018)+(E1=0.001) Scer1 + +--(F1=0.010) Sbay1 +--(F2=0.014) Sbay2 YLR442C_YML065Wp.dnd YLR442C - SIR3 - [] - regulator of silencing at HML, HMR, and telomeres YML065W - ORC1 - [] - 120-kDa (largest) subunit of origin recognition complex (ORC); shows homology to Cdc6p, Cdc18p, and Sir3p and to proteins from K. lactis, S. pombe, and humans +------------------------------------------------------(C=0.274) Kwal +-----------------------------------------------------------(D1=0.297)+-------------------------------------(E1=0.186) Scer1 + +-------------------------------------(F1=0.188) Sbay1 +--------------------------------(D2=0.162)+-----------------(E2=0.087) Scer2 + +---------------(F2=0.079) Sbay2 YLR449W_YML074Cp.dnd YLR449W - FPR4 - [] - 60 kDa nuclear FK506 binding protein YML074C - FPR3 - [] - Prolyl cis-trans isomerase, also called proline rotamase or peptidylprolyl cis-trans isomerase (PPIase) +---------------------(D2=0.106)+--------------------------------(C=0.160) Kwal + +------------------------------(D1=0.154)+-----------------(E1=0.088) Scer1 + + +----------------(F1=0.083) Sbay1 +-------------(E2=0.067) Scer2 +--------------(F2=0.073) Sbay2 YLR450W_YML075Cp.dnd YLR450W - HMG2 - [] - 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase isozyme YML075C - HMG1 - [] - 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase isozyme +---------------------(D2=0.108)+-----------------------------------------(C=0.210) Kwal + +--------------------------------------(D1=0.193)+--------(E1=0.042) Scer1 + + +--------(F1=0.040) Sbay1 +---------(E2=0.046) Scer2 +--------(F2=0.045) Sbay2 YLR456W_YPR172Wp.dnd YLR456W - - [] - Hypothetical ORF YPR172W - - [] - Hypothetical ORF +---------------------------------------------------------(C=0.286) Kwal +----------------------------------------(D1=0.204)+--------------------(E1=0.104) Scer1 + +-----------------(F1=0.087) Sbay1 +----------------------------------(D2=0.170)+----------(E2=0.053) Scer2 + +---------(F2=0.047) Sbay2 YLR457C_YPR174Cp.dnd YLR457C - NBP1 - [] - Nap1p binding protein YPR174C - - [] - Hypothetical ORF +-----------------------------------------------------(D1=0.266)+-------------------------------------------------------------------(C=0.339) Kwal + +--------------------------------------------------------------------(D2=0.344)+------------------(E2=0.091) Scer2 + + +-----------------(F2=0.085) Sbay2 +------------------(E1=0.091) Scer1 +---------------------(F1=0.106) Sbay1 YML087C_YML125Cp.dnd YML087C - - [] - Hypothetical ORF YML125C - - [] - Protein required for cell viability +-----------------------(D2=0.118)+---------------------------------------------(C=0.227) Kwal + +--------------------------------------------------------(D1=0.280)+------------(E1=0.061) Scer1 + + +----------(F1=0.054) Sbay1 +-------------(E2=0.065) Scer2 +--------------(F2=0.073) Sbay2 YML106W_YMR271Cp.dnd YML106W - URA5 - [] - Orotate phosphoribosyltransferase 1 YMR271C - URA10 - [] - Orotate phosphoribosyltransferase 2 +---------------(D1=0.079)+---------------------------(C=0.135) Kwal + +-----------------------(D2=0.116)+------------(E2=0.065) Scer2 + + +---------(F2=0.050) Sbay2 +--(E1=0.012) Scer1 +-(F1=0.010) Sbay1 YML109W_YMR273Cp.dnd YML109W - ZDS2 - [] - Zds1 homolog YMR273C - ZDS1 - [] - peripheral plasma membrane protein +-------------------------------------(D2=0.189)+--------------------------------------------------------------------(C=0.344) Kwal + +------------------------------------------(D1=0.214)+-------------------------(E1=0.129) Scer1 + + +--------------------------(F1=0.134) Sbay1 +--------------------------------(E2=0.164) Scer2 +---------------------------------(F2=0.170) Sbay2 YML111W_YMR275Cp.dnd YML111W - BUL2 - [] - (putative) ubiquitin-mediated protein degradation YMR275C - BUL1 - [] - Rsp5p ubiquitin ligase binding protein +---------------------------------(D2=0.166)+-----------------------------------------------------------(C=0.296) Kwal + +-----------------------------------(D1=0.179)+-----------(E1=0.057) Scer1 + + +----------(F1=0.055) Sbay1 +--------------(E2=0.071) Scer2 +----------------(F2=0.080) Sbay2 YML116W_YMR279Cp.dnd YML116W - ATR1 - [] - predicted protein is very hydrophobic, has many membrane-spanning regions, several potential glycosylation sites, potential ATP-binding site YMR279C - - [] - Hypothetical ORF +---------------------------------------------(C=0.225) Kwal +-------------------(D1=0.098)+------------------(E1=0.095) Scer1 + +--------------------(F1=0.101) Sbay1 +--------------------------(D2=0.135)+--------------------(E2=0.102) Scer2 + +----------------(F2=0.085) Sbay2 YML118W_YMR285Cp.dnd YML118W - NGL3 - [] - DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angel gene; homolog to ngl1 and ngl2 YMR285C - NGL2 - [] - DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angelgene; homolog to ngl1 and ngl3 +---------------------(D2=0.108)+-----------------------------------(C=0.176) Kwal + +--------------------------------------------------------(D1=0.284)+---------------------------(E1=0.136) Scer1 + + +---------------------------(F1=0.137) Sbay1 +-------------(E2=0.067) Scer2 +---------------(F2=0.079) Sbay2 YMR180C_YPL228Wp.dnd YMR180C - CTL1 - [] - RNA triphosphatase YPL228W - CET1 - [] - mRNA capping enzyme beta subunit (80 kDa), RNA 5'-triphosphatase +----------------------(D2=0.111)+---------------------------------------------(C=0.229) Kwal + +---------------------------------------------------------------------------(D1=0.380)+--------------------------------------------(E1=0.221) Scer1 + + +------------------------------------------(F1=0.212) Sbay1 +---------------(E2=0.078) Scer2 +---------------------------------(F2=0.167) Sbay2 YMR181C_YPL229Wp.dnd YMR181C - - [] - Hypothetical ORF YPL229W - - [] - Hypothetical ORF +----------------------------------------(D2=0.204)+-------------------------------------------------------------------------(C=0.367) Kwal + +------------------------------------------------------------------------(D1=0.361)+--------(E1=0.042) Scer1 + + +-----------(F1=0.056) Sbay1 +-------------------(E2=0.097) Scer2 +--------------------(F2=0.102) Sbay2 YMR183C_YPL232Wp.dnd YMR183C - SSO2 - [] - post-Golgi t-SNARE YPL232W - SSO1 - [] - post-Golgi t-SNARE +-------------------(D1=0.099)+-------------------------------(C=0.155) Kwal + +--------------------(D2=0.100)+-----(E2=0.025) Scer2 + + +--------(F2=0.044) Sbay2 +-----(E1=0.027) Scer1 +------(F1=0.034) Sbay1 YMR192W_YPL249Cp.dnd YMR192W - - [] - Hypothetical ORF YPL249C - GYP5 - [] - Hypothetical ORF +-----------------------------------(D2=0.179)+------------------------------------------------------(C=0.272) Kwal + +----------------------------------------------------(D1=0.263)+---------------------------------(E1=0.168) Scer1 + + +---------------------------------(F1=0.168) Sbay1 +----------------------(E2=0.112) Scer2 +-------------------(F2=0.098) Sbay2 YMR198W_YPL253Cp.dnd YMR198W - CIK1 - [] - spindle pole body associated protein YPL253C - VIK1 - [] - Cik1p homolog +----------------------------------------------------(D2=0.261)+-----------------------------------------------------------------------------(C=0.386) Kwal + +---------------------------------------------------------(D1=0.286)+----------------------(E1=0.113) Scer1 + + +------------------------------(F1=0.153) Sbay1 +-------------------------(E2=0.128) Scer2 +-----------------------(F2=0.120) Sbay2 YMR199W_YPL256Cp.dnd YMR199W - CLN1 - [] - G(sub)1 cyclin YPL256C - CLN2 - [] - G(sub)1 cyclin +---------------------------------------------(C=0.228) Kwal +---------------------------------(D1=0.170)+---------(E1=0.048) Scer1 + +--------(F1=0.042) Sbay1 +-----------------------------(D2=0.147)+--------------(E2=0.072) Scer2 + +------------(F2=0.062) Sbay2 YMR222C_YOR280Cp.dnd YMR222C - FSH2 - [] - YOR280C - FSH3 - [] - +----------------------------------------------(C=0.233) Kwal +-------------------------------------(D1=0.186)+------------(E1=0.063) Scer1 + +------------(F1=0.063) Sbay1 +-----------------------------------------(D2=0.206)+---------------(E2=0.075) Scer2 + +-----------------(F2=0.086) Sbay2 YMR233W_YOR295Wp.dnd YMR233W - TRI1 - [] - Interacts with Top1p in 2-hybrid assay. YOR295W - UAF30 - [] - Interacts with Top1p in the 2-hybrid system. +---------------------------(D1=0.138)+--------------------------------------------------------------(C=0.311) Kwal + +----------------------------------------(D2=0.203)+--------------------------------------(E2=0.192) Scer2 + + +-------------------------------------(F2=0.190) Sbay2 +--------------------(E1=0.102) Scer1 +--------------------(F1=0.101) Sbay1 YMR237W_YOR299Wp.dnd YMR237W - - [] - Hypothetical ORF YOR299W - BUD7 - [] - involved in bipolar bud site selection +------------------(D2=0.093)+--------------------------------------------------------------(C=0.313) Kwal + +-------------------------------------(D1=0.189)+-------(E1=0.038) Scer1 + + +-------(F1=0.037) Sbay1 +---------------------(E2=0.105) Scer2 +--------------------(F2=0.103) Sbay2 YMR243C_YOR316Cp.dnd YMR243C - ZRC1 - [] - involved in zinc and cadmium ion homeostasis YOR316C - COT1 - [] - involved in cobalt accumulation +----------------------------(D1=0.141)+----------------------------------------(C=0.202) Kwal + +----------------------------(D2=0.142)+------------------------(E2=0.120) Scer2 + + +-------------------(F2=0.097) Sbay2 +-------(E1=0.038) Scer1 +-------(F1=0.037) Sbay1 YMR246W_YOR317Wp.dnd YMR246W - FAA4 - [] - long-chain fatty acid--CoA ligase and synthetase 4 YOR317W - FAA1 - [] - long chain fatty acyl:CoA synthetase +----------------(D1=0.081)+-------------------------------------(C=0.185) Kwal + +-----------------------------(D2=0.145)+-------------(E2=0.066) Scer2 + + +-----------(F2=0.055) Sbay2 +-----------------(E1=0.086) Scer1 +--------------------(F1=0.100) Sbay1 YNL093W_YOR089Cp.dnd YNL093W - YPT53 - [] - GTP-binding protein of the rab family YOR089C - VPS21 - [] - small GTP-binding protein; geranylgeranylated; geranylgeranylation required for membrane association; also involved in endocytosis post vesicle internalization +----------------------(C=0.111) Kwal +-------------------------------------------(D1=0.215)+-------------------------(E1=0.126) Scer1 + +---------------------(F1=0.108) Sbay1 +------------------------------(D2=0.153)+(E2=-0.056) Scer2 + +--------------------------------(F2=0.160) Sbay2 YNL095C_YOR092Wp.dnd YNL095C - - [] - Hypothetical ORF YOR092W - ECM3 - [] - involved in cell wall biogenesis (putative) +-----------------(D1=0.087)+---------------------------------------(C=0.197) Kwal + +-------------------------(D2=0.128)+-----------(E2=0.060) Scer2 + + +-----------(F2=0.059) Sbay2 +--------------------(E1=0.104) Scer1 +---------------------(F1=0.105) Sbay1 YNL098C_YOR101Wp.dnd YNL098C - RAS2 - [] - Small, GTP-binding protein YOR101W - RAS1 - [] - ras proto-oncogene homolog +-------------------(D2=0.096)+---------------------------------------(C=0.199) Kwal + +--------------------------(D1=0.130)+-----------------(E1=0.086) Scer1 + + +----------------(F1=0.084) Sbay1 +--------------------------(E2=0.132) Scer2 +----------------------(F2=0.114) Sbay2 YNL104C_YOR108Wp.dnd YNL104C - LEU4 - [] - alpha-isopropylmalate synthase (2-Isopropylmalate Synthase) YOR108W - - [] - Hypothetical ORF +---------(D1=0.046)+----------------------------(C=0.140) Kwal + +---------------(D2=0.078)+-----(E2=0.026) Scer2 + + +------(F2=0.032) Sbay2 +-----(E1=0.026) Scer1 +-----(F1=0.029) Sbay1 YNL293W_YOL112Wp.dnd YNL293W - MSB3 - [] - Multicopy Suppressor of Bud Emergence YOL112W - MSB4 - [] - multicopy suppressor of bud emergence defect +--------------------------------------------(C=0.222) Kwal +------------------------------(D1=0.150)+-------------(E1=0.067) Scer1 + +------------(F1=0.064) Sbay1 +---------------------------------------------(D2=0.227)+---------------(E2=0.080) Scer2 + +-------------(F2=0.068) Sbay2 YNL298W_YOL113Wp.dnd YNL298W - CLA4 - [] - protein kinase, homologous to Ste20p, interacts with CDC42 YOL113W - SKM1 - [] - serine/threonine protein kinase +-------------------------------------(C=0.189) Kwal +----------------------(D1=0.111)+------------(E1=0.062) Scer1 + +-----------(F1=0.059) Sbay1 +-----------------------------------------------(D2=0.236)+-----------------(E2=0.089) Scer2 + +------------------(F2=0.094) Sbay2 YNL299W_YOL115Wp.dnd YNL299W - TRF5 - [] - exhibits homology to Trf4p and Top1p YOL115W - TRF4 - [] - homologous to Trf5p and Top1p, associates with Smc1p and Smc2p +---------------------------------------------(C=0.228) Kwal +--------------------------(D1=0.133)+------------------------(E1=0.124) Scer1 + +--------------------(F1=0.103) Sbay1 +---------------------------------(D2=0.166)+--------------(E2=0.071) Scer2 + +-------------(F2=0.067) Sbay2 YNL307C_YOL128Cp.dnd YNL307C - MCK1 - [] - 43.1 kDa Serine/threonine/tyrosine protein kinase YOL128C - - [] - Hypothetical ORF +------------------(D1=0.093)+--------------------(C=0.100) Kwal + +---------------------------------------------------------------------------------(D2=0.409)+----------------(E2=0.084) Scer2 + + +---------------(F2=0.078) Sbay2 +---(E1=0.018) Scer1 +---(F1=0.019) Sbay1 YOR222W_YPL134Cp.dnd YOR222W - ODC2 - [] - YPL134C - ODC1 - [] - +---------------------------(D2=0.139)+-------------------------------(C=0.160) Kwal + +-------------------------------(D1=0.156)+-------(E1=0.037) Scer1 + + +-------(F1=0.038) Sbay1 +--------(E2=0.043) Scer2 +--------(F2=0.041) Sbay2 YOR226C_YPL135Wp.dnd YOR226C - ISU2 - [] - Iron-sulfur cluster nifU-like protein YPL135W - ISU1 - [] - Iron-sulfur cluster nifU-like protein +-------------------------(C=0.128) Kwal +--------------------------(D1=0.132)+--(E1=0.014) Scer1 + +---(F1=0.018) Sbay1 +-------------------------(D2=0.126)+----(E2=0.024) Scer2 + +----(F2=0.024) Sbay2 YOR231W_YPL140Cp.dnd YOR231W - MKK1 - [] - protein kinase involved in protein kinase C pathway YPL140C - MKK2 - [] - protein kinase +--------------------------(D1=0.131)+----------------------------------(C=0.170) Kwal + +-----------------------------(D2=0.146)+---------------(E2=0.076) Scer2 + + +------------(F2=0.064) Sbay2 +-------------(E1=0.068) Scer1 +------------------(F1=0.092) Sbay1 YOR233W_YPL141Cp.dnd YOR233W - KIN4 - [] - protein kinase YPL141C - - [] - Hypothetical ORF +---------------------------------(D2=0.165)+-------------------------------------------------------(C=0.279) Kwal + +-------------------------------------(D1=0.186)+-------------------------(E1=0.130) Scer1 + + +----------------------------(F1=0.140) Sbay1 +--------------------(E2=0.104) Scer2 +------------------(F2=0.095) Sbay2 YOR237W_YPL145Cp.dnd YOR237W - HES1 - [] - homology to human oxysterol binding protein YPL145C - KES1 - [] - sequence similar to Hes1p +---------------------------------(C=0.170) Kwal +-------------------------(D1=0.126)+------------(E1=0.064) Scer1 + +-----------(F1=0.056) Sbay1 +--------------------(D2=0.101)+---(E2=0.018) Scer2 + +----(F2=0.024) Sbay2 YOR256C_YPL176Cp.dnd YOR256C - - [] - Protein required for cell viability YPL176C - - [] - Hypothetical ORF +--------------------------------(D1=0.161)+--------------------------------------------------------------(C=0.313) Kwal + +-----------------------------------(D2=0.177)+---------------------(E2=0.107) Scer2 + + +-------------------(F2=0.097) Sbay2 +-----------------------(E1=0.116) Scer1 +-----------------------(F1=0.115) Sbay1 { accelerated: 210 conversion.: 5 correct....: 92 incorrect..: 8 } { accelerated: 210/315 (66.7%) conversion.: 5/315 (1.6%) correct....: 92/315 (29.2%) incorrect..: 8/315 (2.5%) }