Supplementary information
From the following article:
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
and The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I & II Team*
Nature 420, 563-573(5 December 2002)
doi:10.1038/nature01266
Section 1: Library information for all RIKEN 3' ESTs
Section 2: Full length sequencing of FANTOM2 clones
Section 3: Sequence Length distribution of FANTOM2 clones
Section 4: Distribution of Phred/Phrap scores in the FANTOM2 sequences
Section 5: Evaluation of completeness of FANTOM2 clone set
Section 6: Annotation pipeline and gene name nomenclature
Section 7: FANTOM2 Viewer
Section 8: Chromosomal distribution of the loci on mouse genome
Section 9: The flow chart to create RTPS
Section 10: CDS status for FANTOM2 representative clones
Section 11: Exon variation in transcripts of alternative splice clusters
Section 12: UTR motifs in FANTOM2 clones
Section 13: Repeat sequences in FANTOM2
Section 14: Comparison of sequence information for protein-coding and non-coding transcripts in the RTPS
Section 15: Superfamilies in RPS
Section 16: Superfamilies in VPS
Section 17: GO assignment for FANTOM2 clones
Section 18: Representative of known gene families
Section 19: Brief diagram of clustering method (ClusTrans)
Section 20: Database that were used for the annotation pipeline and curation
Section 21: Supplementary methods
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