FIGURE 1. Circular representation of the S. typhi genome.
From the following article:
Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18
J. Parkhill, G. Dougan, K. D. James, N. R. Thomson, D. Pickard, J. Wain, C. Churcher, K. L. Mungall, S. D. Bentley, M. T. G. Holden, M. Sebaihia, S. Baker, D. Basham, K. Brooks, T. Chillingworth, P. Connerton, A. Cronin, P. Davis, R. M. Davies, L. Dowd, N. White, J. Farrar, T. Feltwell, N. Hamlin, A. Haque, T. T. Hien, S. Holroyd, K. Jagels, A. Krogh, T. S. Larsen, S. Leather, S. Moule, P. Ó'Gaora, C. Parry, M. Quail, K. Rutherford, M. Simmonds, J. Skelton, K. Stevens, S. Whitehead and B. G. Barrell
Nature 413, 848-852(25 October 2001)
doi:10.1038/35101607
The outer scale is marked in megabases. Circles range from 1 (outer circle) to 9 (inner circle). Circles 1 and 2, genes on forward and reverse strand; circles 3 and 4, genes conserved with E. coli; circles 5 and 6, genes unique to S. typhi with respect to E. coli; circle 7, pseudogenes; circle 8, G+C content; circle 9, GC bias ((G - C/G +C); khaki indicates values >1; purple <1). All genes are colour-coded by function: dark blue, pathogenicity/adaptation; black, energy metabolism; red, information transfer; dark green, membranes/surface structures; cyan, degradation of macromolecules; purple, degradation of small molecules; yellow, central/intermediary metabolism; light blue, regulators; pink, phage/IS elements; orange, conserved hypothetical; pale green, unknown function; brown, pseudogenes.
