Original Articles

Molecular Therapy (2006) 13, 494–505; doi: 10.1016/j.ymthe.2005.11.002

Design of Noninflammatory Synthetic siRNA Mediating Potent Gene Silencing in Vivo

Adam D. Judge1, Gurneet Bola1, Amy C. H. Lee1 and Ian MacLachlan1

1Protiva Biotherapeutics, 100-3480 Gilmore Way, Burnaby, BC, Canada V5G 4Y1

Correspondence: Ian MacLachlan, Fax: +1 604 630 5103. E-mail: ian@protivabio.com

Received 7 October 2005; Revised 2 November 2005; Accepted 4 November 2005.

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Abstract

Targeted silencing of disease-associated genes by synthetic short interfering RNA (siRNA) holds considerable promise as a novel therapeutic strategy. However, unmodified siRNA can be potent triggers of the innate immune response, particularly when associated with delivery vehicles that facilitate intracellular uptake. This represents a significant barrier to the therapeutic development of siRNA due to toxicity and off-target gene effects associated with this inflammatory response. Here we show that immune stimulation by synthetic siRNA can be completely abrogated by selective incorporation of 2'-O-methyl (2'OMe) uridine or guanosine nucleosides into one strand of the siRNA duplex. These noninflammatory siRNA, containing less than 20% modified nucleotides, can be readily generated without disrupting their gene-silencing activity. We show that, coupled with an effective systemic delivery vehicle, 2'OMe-modified siRNA targeting apolipoprotein B (apoB) can mediate potent silencing of its target mRNA, causing significant decreases in serum apoB and cholesterol. This is achieved at therapeutically viable siRNA doses without cytokine induction, toxicity, or off-target effects associated with the use of unmodified siRNA. This approach to siRNA design and delivery should prove widely applicable and represents an important step in advancing synthetic siRNA into a broad range of therapeutic areas.

Keywords:

RNA interference, nucleic acid therapeutics, synthetic siRNA, chemical Modification, inflammatory response, apolipoprotein B, interferons, liposomes

Abbreviations:

apoB, apolipoprotein B; TLR, Toll-like receptor; ssRNA, single-stranded RNA; dsRNA, double-stranded RNA; siRNA, short interfering RNA; IFN-alpha, interferon-alpha; IL-6, interleukin-6; TNF-alpha, tumor necrosis factor-alpha; RNAi, RNA interference; beta-gal, beta-galactosidase; PBMC, peripheral blood mononuclear cells

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