FIGURE 3 

FROM:

Ultrasensitive gene regulation by positive feedback loops in nucleosome modification

Kim Sneppen, Mille A Micheelsen & Ian B Dodd

doi:10.1038/msb.2008.21

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Ultrasensitivity and bistable expression in response to TF stimulation. The steps in Figure 2 were iterated for systems with various numbers of nucleosomes N, feedback-to-noise ratios F=alpha(1- alpha), and different levels of recruited HAT activity sigma. The system was biased towards methylation by setting mu=2/3 (see Figure 2). The upper panels show the average fraction of acetylated nucleosomes left fenceAright fence versus sigma. The lower panels show the probabilities (lighter colours for higher) for the system to exist with a particular fraction of A nucleosomes A for the cases where F=5. The h values were obtained by fitting the curves to left fenceAright fence- A0infinitysigmah/(k+sigmah), varying A0, K and h.

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