FIGURE 3
FROM:
Ultrasensitive gene regulation by positive feedback loops in nucleosome modification
Kim Sneppen, Mille A Micheelsen & Ian B Dodd
doi:10.1038/msb.2008.21
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Ultrasensitivity and bistable expression in response to TF stimulation. The steps in Figure 2 were iterated for systems with various numbers of nucleosomes N, feedback-to-noise ratios F=
(1-
), and different levels of recruited HAT activity
. The system was biased towards methylation by setting
=2/3 (see Figure 2). The upper panels show the average fraction of acetylated nucleosomes
A
versus
. The lower panels show the probabilities (lighter colours for higher) for the system to exist with a particular fraction of A nucleosomes A for the cases where F=5. The h values were obtained by fitting the curves to
A
-
A0
h/(k+
h), varying A0, K and h.
