FIGURE 2
FROM:
Communication between levels of transcriptional control improves robustness and adaptivity
Alexander M Tsankov, Christopher R Brown, Michael C Yu, Moe Z Win, Pamela A Silver & Jason M Casolari
doi:10.1038/msb4100106
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Resulting network. (A) Each circle (node) represents a regulator from a color-coded group and each link (edge) represents a significant synergistic (positive) binding relationship between two factors (see Supplementary Figure 1 for opposing (negative) links). Each node is labeled by the regulator's common name followed by an 'i' or 'o' if its genomic occupancy was measured at intergenic or ORF regions, respectively. The dotted box shows factors that have a preference for binding active genes. (B–G) Zoom in on several known interactions highlighted in solid boxes (see text). Network visualization was performed using Pajek (http://vlado.fmf.uni-lj.si/pub/netw
orks/pajek/doc/pajekman.htm).