Proteins
2009
Linear combinations of docking affinities explain quantitative differences in RTK signaling
Andrew Gordus,
Jordan A Krall,
Elsa M Beyer,
Alexis Kaushansky,
Alejandro Wolf-Yadlin,
Mark Sevecka,
Bryan H Chang,
John Rush
&
Gavin MacBeath
doi:10.1038/msb.2008.72
Published online:
20 January 2009
Synopsis | Full Text | PDF (3,155K) | Supplementary information
Dynamic map of protein interactions in the Escherichia coli chemotaxis pathway
David Kentner
&
Victor Sourjik
doi:10.1038/msb.2008.77
Published online:
20 January 2009
Synopsis | Full Text | PDF (4,641K) | Supplementary information
Efficient protein depletion by genetically controlled deprotection of a dormant N-degron
Christof Taxis,
Gunter Stier,
Roberta Spadaccini
&
Michael Knop
doi:10.1038/msb.2009.25
Published online:
28 April 2009
Full Text | PDF (3,548K) | Supplementary information
An atlas of chaperone–protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell
Yunchen Gong,
Yoshito Kakihara,
Nevan Krogan,
Jack Greenblatt,
Andrew Emili,
Zhaolei Zhang
&
Walid A Houry
doi:10.1038/msb.2009.26
Published online:
16 June 2009
Synopsis | Full Text | PDF (3,373K) | Supplementary information
A comprehensive framework of E2–RING E3 interactions of the human ubiquitin–proteasome system
Sjoerd J L van Wijk,
Sjoerd J de Vries,
Patrick Kemmeren,
Anding Huang,
Rolf Boelens,
Alexandre M J J Bonvin
&
H Th Marc Timmers
doi:10.1038/msb.2009.55
Published online:
18 August 2009
Synopsis | Full Text | PDF (5,801K) | Supplementary information
The switching dynamics of the bacterial flagellar motor
Siebe B van Albada,
Sorin T
nase-Nicola
&
Pieter Rein ten Wolde
doi:10.1038/msb.2009.74
Published online:
13 October 2009
Full Text | PDF (7,604K) | Supplementary information
Complex topology rather than complex membership is a determinant of protein dosage sensitivity
Richard Oberdorf
&
Tanja Kortemme
doi:10.1038/msb.2009.9
Published online:
17 March 2009
Synopsis | Full Text | PDF (1,241K) | Supplementary information
2008
The role of disorder in interaction networks: a structural analysis
Philip M Kim,
Andrea Sboner,
Yu Xia
&
Mark Gerstein
doi:10.1038/msb.2008.16
Published online:
25 March 2008
Full Text | PDF (201K) | Supplementary information
Constraints imposed by non-functional protein–protein interactions on gene expression and proteome size
Jingshan Zhang,
Sergei Maslov
&
Eugene I Shakhnovich
doi:10.1038/msb.2008.48
Published online:
05 August 2008
Synopsis | Full Text | PDF (1,746K) | Supplementary information
Hepatitis C virus infection protein network
B de Chassey,
V Navratil,
L Tafforeau,
M S Hiet,
A Aublin-Gex,
S Agaugué,
G Meiffren,
F Pradezynski,
B F Faria,
T Chantier,
M Le Breton,
J Pellet,
N Davoust,
P E Mangeot,
A Chaboud,
F Penin,
Y Jacob,
P O Vidalain,
M Vidal,
P André,
C Rabourdin-Combe
&
V Lotteau
doi:10.1038/msb.2008.66
Published online:
04 November 2008
Synopsis | Full Text | PDF (2,603K) | Supplementary information
2007
Network-based prediction of protein function
Roded Sharan,
Igor Ulitsky
&
Ron Shamir
doi:10.1038/msb4100129
Published online:
13 March 2007
Full Text | PDF (353K)
2006
Synthetic protein–protein interaction domains created by shuffling Cys2His2 zinc-fingers
Astrid V Giesecke,
Rui Fang
&
J Keith Joung
doi:10.1038/msb4100053
Published online:
21 March 2006
Synopsis | Full Text | PDF (661K) | Supplementary information
Residues crucial for maintaining short paths in network communication mediate signaling in proteins
Antonio del Sol,
Hirotomo Fujihashi,
Dolors Amoros
&
Ruth Nussinov
doi:10.1038/msb4100063
Published online:
02 May 2006
Synopsis | Full Text | PDF (611K) | Supplementary information
Markov propagation of allosteric effects in biomolecular systems: application to GroEL–GroES
Chakra Chennubhotla
&
Ivet Bahar
doi:10.1038/msb4100075
Published online:
04 July 2006
Synopsis | Full Text | PDF (888K) | Supplementary information
2005
Phosphotyrosine interactome of the ErbB-receptor kinase family
Waltraud X Schulze,
Lei Deng
&
Matthias Mann
doi:10.1038/msb4100012
Published online:
25 May 2005
Synopsis | Full Text | PDF (445K) | Supplementary information
Circadian clocks go in vitro: purely post-translational oscillators in cyanobacteria
Felix Naef
doi:10.1038/msb4100027
Published online:
13 September 2005
Full Text | PDF (132K)