Subject archive

Chromatin & Transcription

2008

Ultrasensitive gene regulation by positive feedback loops in nucleosome modification

Kim Sneppen, Mille A Micheelsen & Ian B Dodd

doi:10.1038/msb.2008.21
Published online: 15 April 2008

Genomic analysis of estrogen cascade reveals histone variant H2A.Z associated with breast cancer progression

Sujun Hua, Caleb B Kallen, Ruby Dhar, Maria T Baquero, Christopher E Mason, Beth A Russell, Parantu K Shah, Jiang Liu, Andrey Khramtsov, Maria S Tretiakova, Thomas N Krausz, Olufunmilayo I Olopade, David L Rimm & Kevin P White

doi:10.1038/msb.2008.25
Published online: 15 April 2008

On the relation between promoter divergence and gene expression evolution

Itay Tirosh, Adina Weinberger, Dana Bezalel, Mark Kaganovich & Naama Barkai

doi:10.1038/msb4100198
Published online: 15 January 2008

2007

Tissue-specific regulatory elements in mammalian promoters

Andrew D Smith, Pavel Sumazin & Michael Q Zhang

doi:10.1038/msb4100114
Published online: 16 January 2007

Reconstructing dynamic regulatory maps

Jason Ernst, Oded Vainas, Christopher T Harbison, Itamar Simon & Ziv Bar-Joseph

doi:10.1038/msb4100115
Published online: 16 January 2007

Genome-wide transcriptional plasticity underlies cellular adaptation to novel challenge

Shay Stern, Tali Dror, Elad Stolovicki, Naama Brenner & Erez Braun

doi:10.1038/msb4100147
Published online: 24 April 2007

Modeling the regulatory network of histone acetylation in Saccharomyces cerevisiae

Hung Pham, Roberto Ferrari, Shawn J Cokus, Siavash K Kurdistani & Matteo Pellegrini

doi:10.1038/msb4100194
Published online: 18 December 2007

2006

Systems-level analyses identify extensive coupling among gene expression machines

Karolina Maciag, Steven J Altschuler, Michael D Slack, Nevan J Krogan, Andrew Emili, Jack F Greenblatt, Tom Maniatis & Lani F Wu

doi:10.1038/msb4100045
Published online: 17 January 2006

Deciphering principles of transcription regulation in eukaryotic genomes

Dat H Nguyen & Patrik D'haeseleer

doi:10.1038/msb4100054
Published online: 18 April 2006

A quantitative study of the benefits of co-regulation using the spoIIA operon as an example

Dagmar Iber

doi:10.1038/msb4100084
Published online: 22 August 2006

Communication between levels of transcriptional control improves robustness and adaptivity

Alexander M Tsankov, Christopher R Brown, Michael C Yu, Moe Z Win, Pamela A Silver & Jason M Casolari

doi:10.1038/msb4100106
Published online: 28 November 2006

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