Original Research Article

Molecular Psychiatry (2005) 10, 950–960. doi:10.1038/sj.mp.4001704; published online 19 July 2005

Haplotypes in the gene encoding protein kinase c-beta (PRKCB1) on chromosome 16 are associated with autism

A Philippi1, E Roschmann1, F Tores1, P Lindenbaum1, A Benajou1, L Germain-Leclerc1, C Marcaillou1, K Fontaine1, M Vanpeene1, S Roy1, S Maillard1, V Decaulne1, J P Saraiva1, P Brooks1, F Rousseau1 and J Hager1

1IntegraGen SA, Genopole, Evry, France

Correspondence: Dr J Hager, Integragen SA, 4 rue Pierre Fontaine, Genopole, Evry 91058, France. E-mail: jorg.hager@integragen.com

Received 9 March 2005; Revised 17 May 2005; Accepted 24 May 2005; Published online 19 July 2005.

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Abstract

Autism is a developmental disorder characterized by impairments in social interaction and communication associated with repetitive patterns of interest or behavior. Autism is highly influenced by genetic factors. Genome-wide linkage and candidate gene association approaches have been used to try and identify autism genes. A few loci have repeatedly been reported linked to autism. Several groups reported evidence for linkage to a region on chromosome 16p. We have applied a direct physical identity-by-descent (IBD) mapping approach to perform a high-density (0.85 megabases) genome-wide linkage scan in 116 families from the AGRE collection. Our results confirm linkage to a region on chromosome 16p with autism. High-resolution single-nucleotide polymorphism (SNP) genotyping and analysis of this region show that haplotypes in the protein kinase c-beta gene are strongly associated with autism. An independent replication of the association in a second set of 167 trio families with autism confirmed our initial findings. Overall, our data provide evidence that the PRKCB1 gene on chromosome 16p may be involved in the etiology of autism.

Keywords:

autism, linkage mapping, SNP, haplotype, association, PRKCB1

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