Original Article

Modern Pathology (2007) 20, 482–496. doi:10.1038/modpathol.3800761; published online 2 March 2007

Detection of SS18-SSX fusion transcripts in formalin-fixed paraffin-embedded neoplasms: analysis of conventional RT-PCR, qRT-PCR and dual color FISH as diagnostic tools for synovial sarcoma

Maria Fernanda C Amary1,2, Fitim Berisha2, Fabiola Del Carlo Bernardi1, Amanda Herbert3, Michelle James4, Jorge Sérgio Reis-Filho4, Cyril Fisher5, Andrew G Nicholson6, Roberto Tirabosco2, Timothy C Diss7 and Adrienne M Flanagan2,7,8

  1. 1Santa Casa School of Medical Sciences and University of Sao Paulo, Sao Paulo, Brazil
  2. 2Department of Histopathology, Royal National Orthopaedic Hospital, Stanmore, Middlesex, UK
  3. 3Histopathology Department, St Thomas' Hospital, London, UK
  4. 4The Breakthrough Breast Cancer Research Centre, Institute of Cancer Research, London, UK
  5. 5Department of Histopathology, Royal Marsden Hospital, London, UK
  6. 6Department of Histopathology, Royal Brompton Hospital, London, UK
  7. 7Institute of Orthopaedics and Musculoskeletal Science, University College London, Stanmore, Middlesex, UK
  8. 8Department of Histopathology, University College Hospital, London, UK

Correspondence: Professor AM Flanagan, MD, FRC Path, PhD, Institute of Orthopaedics and Musculoskeletal Science, University College London, Royal National Orthopaedic Hospital, Stanmore, Middlesex HA7 4LP, UK. E-mail: a.flanagan@ucl.ac.uk

Received 11 December 2006; Revised 11 January 2007; Accepted 16 January 2007; Published online 2 March 2007.

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Abstract

Synovial Sarcoma consistently harbors t(X;18) resulting in SS18-SSX1, SS18-SSX2 and rarely SS18-SSX4 fusion transcripts. Of 328 cases included in our study, synovial sarcoma was either the primary diagnosis or was very high in the differential diagnosis in 134 cases: of these, amplifiable cDNA was obtained from 131. SS18-SSX fusion products were found in 126 (96%) cases (74 SS18-SSX1, 52 SS18-SSX2), using quantitative and 120 by conventional reverse transcriptase–polymerase chain reaction (RT-PCR). One hundred and one cases in a tissue microarray, analyzed by fluorescence in situ hybridization (FISH), revealed that 87 (86%) showed SS18 rearrangement: four RT-PCR positive cases, reported as negative for FISH, showed loss of one spectrum green signal, and 15 cases had multiple copies of the SS18 gene: both findings are potentially problematic when interpreting results. One of three cases, not analyzed by RT-PCR reaction owing to poor quality RNA, was positive by FISH. SS18-SSX1 was present in 56 monophasic and 18 biphasic synovial sarcoma: SS18-SSX2 was detected in 41 monophasic and 11 biphasic synovial sarcoma. Poorly differentiated areas were identified in 44 cases (31%). There was no statistically significant association between biphasic, monophasic and fusion type. Five cases were negative for SS18 rearrangement by all methods, three of which were pleural-sited neoplasms. Following clinical input, a diagnosis of mesothelioma was favored in one case, a sarcoma, not otherwise specified in another and a solitary fibrous tumor in the third case. The possibility of a malignant peripheral nerve sheath tumor could not be excluded in the other two cases. We concluded that the employment of a combination of molecular approaches is a powerful aid to diagnosing synovial sarcoma giving at least 96% sensitivity and 100% specificity but results must be interpreted in the light of other modalities such as clinical findings and immunohistochemical data.

Keywords:

synovial sarcoma, FISH, RT-PCR, soft tissue, SS18-SSX, SYT-SSX

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