Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Original Article
  • Published:

Lymphoma

Distinctive patterns of BCL6 molecular alterations and their functional consequences in different subgroups of diffuse large B-cell lymphoma

Abstract

Gene expression profiling of diffuse large B-cell lymphoma (DLBCL) has revealed biologically and prognostically distinct subgroups: germinal center B-cell-like (GCB), activated B-cell-like (ABC) and primary mediastinal (PM) DLBCL. The BCL6 gene is often translocated and/or mutated in DLBCL. Therefore, we examined the BCL6 molecular alterations in these DLBCL subgroups, and their impact on BCL6 expression and BCL6 target gene repression. BCL6 translocations at the major breakpoint region (MBR) were detected in 25 (18.8%) of 133 DLBCL cases, with a higher frequency in the PM (33%) and ABC (24%) subgroups than in the GCB (10%) subgroup. Translocations at the alternative breakpoint region (ABR) were detected in five (6.4%) of 78 DLBCL cases, with three cases in ABC and one case each in the GCB and the unclassifiable subgroups. The translocated cases involved IgH and non-IgH partners in about equal frequency and were not associated with different levels of BCL6 mRNA and protein expression. BCL6 mutations were detected in 61% of DLBCL cases, with a significantly higher frequency in the GCB and PM subgroups (>70%) than in the ABC subgroup (44%). Exon-1 mutations were mostly observed in the GCB subgroup. The repression of known BCL6 target genes correlated with the level of BCL6 mRNA and protein expression in GCB and ABC subgroups but not with BCL6 translocation and intronic mutations. No clear inverse correlation between BCL6 expression and p53 expression was observed. Patients with higher BCL6 mRNA or protein expression had a significantly better overall survival. The biological role of BCL6 in translocated cases where repression of known target genes is not demonstrated is intriguing and warrants further investigation.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1
Figure 2
Figure 3
Figure 4
Figure 5
Figure 6
Figure 7

Similar content being viewed by others

Accession codes

Accessions

GenBank/EMBL/DDBJ

References

  1. Anderson JR, Armitage JO, Weisenburger DD . Epidemiology of the non-Hodgkin's lymphomas: distributions of the major subtypes differ by geographic locations. Non-Hodgkin's Lymphoma Classification Project. Ann Oncol 1998; 9: 717–720.

    Article  CAS  Google Scholar 

  2. Bea S, Zettl A, Wright G, Salaverria I, Jehn P, Moreno V et al. Diffuse large B-cell lymphoma subgroups have distinct genetic profiles that influence tumor biology and improve gene-expression-based survival prediction. Blood 2005; 106: 3183–3190.

    Article  CAS  Google Scholar 

  3. Gatter KC, Warnke R . Diffuse large B-cell lymphoma. In: Jaffe ES, Harris NL, Stein H, Vardiman JW (eds) World Health Organization Classification of Tumours Pathology and Genetics of Tumours of Haematopoietic and Lymphoid Tissues. IARC Press: Lyon, 2001, p 171–174.

    Google Scholar 

  4. Rosenwald A, Wright G, Chan WC, Connors JM, Campo E, Fisher RI et al. The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma. N Engl J Med 2002; 346: 1937–1947.

    Article  Google Scholar 

  5. Alizadeh AA, Eisen MB, Davis RE, Ma C, Lossos IS, Rosenwald A et al. Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature 2000; 403: 503–511.

    Article  CAS  Google Scholar 

  6. Rosenwald A, Wright G, Leroy K, Yu X, Gaulard P, Gascoyne RD et al. Molecular diagnosis of primary mediastinal B cell lymphoma identifies a clinically favorable subgroup of diffuse large B cell lymphoma related to hodgkin lymphoma. J Exp Med 2003; 198: 851–862.

    Article  CAS  Google Scholar 

  7. Savage KJ, Monti S, Kutok JL, Cattoretti G, Neuberg D, De Leval L et al. The molecular signature of mediastinal large B-cell lymphoma differs from that of other diffuse large B-cell lymphomas and shares features with classical Hodgkin lymphoma. Blood 2003; 102: 3871–3879.

    Article  CAS  Google Scholar 

  8. Iqbal J, Sanger WG, Horsman DE, Rosenwald A, Pickering DL, Dave B et al. BCL2 translocation defines a unique tumor subset within the germinal center B-cell-like diffuse large B-cell lymphoma. Am J Pathol 2004; 165: 159–166.

    Article  CAS  Google Scholar 

  9. Ye BH, Lista F, Lo Coco F, Knowles DM, Offit K, Chaganti RS et al. Alterations of a zinc finger-encoding gene, BCL-6, in diffuse large-cell lymphoma. Science 1993; 262: 747–750.

    Article  CAS  Google Scholar 

  10. Baron BW, Nucifora G, McCabe N, Espinosa III R, Le Beau MM, McKeithan TW . Identification of the gene associated with the recurring chromosomal translocations t(3;14)(q27;q32) and t(3;22)(q27;q11) in B-cell lymphomas. Proc Natl Acad Sci USA 1993; 90: 5262–5266.

    Article  CAS  Google Scholar 

  11. Cattoretti G, Chang CC, Cechova K, Zhang J, Ye BH, Falini B et al. BCL-6 protein is expressed in germinal-center B cells. Blood 1995; 86: 45–53.

    CAS  PubMed  Google Scholar 

  12. Chang CC, Ye BH, Chaganti RS, Dalla-Favera R . BCL-6, a POZ/zinc-finger protein, is a sequence-specific transcriptional repressor. Proc Natl Acad Sci USA 1996; 93: 6947–6952.

    Article  CAS  Google Scholar 

  13. Dent AL, Shaffer AL, Yu X, Allman D, Staudt LM . Control of inflammation, cytokine expression, and germinal center formation by BCL-6. Science 1997; 276: 589–592.

    Article  CAS  Google Scholar 

  14. Cattoretti G, Pasqualucci L, Ballon G, Tam W, Nandula SV, Shen Q et al. Deregulated BCL6 expression recapitulates the pathogenesis of human diffuse large B cell lymphomas in mice. Cancer Cell 2005; 7: 445–455.

    Article  CAS  Google Scholar 

  15. Jerkeman M, Aman P, Cavallin-Stahl E, Torlakovic E, Akerman M, Mitelman F et al. Prognostic implications of BCL6 rearrangement in uniformly treated patients with diffuse large B-cell lymphoma – a Nordic Lymphoma Group study. Int J Oncol 2002; 20: 161–165.

    CAS  PubMed  Google Scholar 

  16. Kramer MH, Hermans J, Wijburg E, Philippo K, Geelen E, van Krieken JH et al. Clinical relevance of BCL2, BCL6, and MYC rearrangements in diffuse large B-cell lymphoma. Blood 1998; 92: 3152–3162.

    CAS  PubMed  Google Scholar 

  17. Barrans SL, O’Connor SJ, Evans PA, Davies FE, Owen RG, Haynes AP et al. Rearrangement of the BCL6 locus at 3q27 is an independent poor prognostic factor in nodal diffuse large B-cell lymphoma. Br J Haematol 2002; 117: 322–332.

    Article  CAS  Google Scholar 

  18. Bastard C, Deweindt C, Kerckaert JP, Lenormand B, Rossi A, Pezzella F et al. LAZ3 rearrangements in non-Hodgkin's lymphoma: correlation with histology, immunophenotype, karyotype, and clinical outcome in 217 patients. Blood 1994; 83: 2423–2427.

    CAS  PubMed  Google Scholar 

  19. Migliazza A, Martinotti S, Chen W, Fusco C, Ye BH, Knowles DM et al. Frequent somatic hypermutation of the 5′ noncoding region of the BCL6 gene in B-cell lymphoma. Proc Natl Acad Sci USA 1995; 92: 12520–12524.

    Article  CAS  Google Scholar 

  20. Vitolo U, Botto B, Capello D, Vivenza D, Zagonel V, Gloghini A et al. Point mutations of the BCL-6 gene: clinical and prognostic correlation in B-diffuse large cell lymphoma. Leukemia 2002; 16: 268–275.

    Article  CAS  Google Scholar 

  21. Pasqualucci L, Migliazza A, Basso K, Houldsworth J, Chaganti RS, Dalla-Favera R . Mutations of the BCL6 proto-oncogene disrupt its negative autoregulation in diffuse large B-cell lymphoma. Blood 2003; 101: 2914–2923.

    Article  CAS  Google Scholar 

  22. Pasqualucci L, Migliazza A, Fracchiolla N, William C, Neri A, Baldini L et al. BCL-6 mutations in normal germinal center B cells: evidence of somatic hypermutation acting outside Ig loci. Proc Natl Acad Sci USA 1998; 95: 11816–11821.

    Article  CAS  Google Scholar 

  23. Lossos IS, Jones CD, Warnke R, Natkunam Y, Kaizer H, Zehnder JL et al. Expression of a single gene, BCL-6, strongly predicts survival in patients with diffuse large B-cell lymphoma. Blood 2001; 98: 945–951.

    Article  CAS  Google Scholar 

  24. Wright G, Tan B, Rosenwald A, Hurt EH, Wiestner A, Staudt LM . A gene expression-based method to diagnose clinically distinct subgroups of diffuse large B cell lymphoma. Proc Natl Acad Sci USA 2003; 100: 9991–9996.

    Article  CAS  Google Scholar 

  25. Hans CP, Weisenburger DD, Greiner TC, Gascoyne RD, Delabie J, Ott G et al. Confirmation of the molecular classification of diffuse large B-cell lymphoma by immunohistochemistry using a tissue microarray. Blood 2004; 103: 275–282.

    Article  CAS  Google Scholar 

  26. Zu Y, Steinberg SM, Campo E, Hans CP, Weisenburger DD, Braziel RM et al. Validation of tissue microarray immunohistochemistry staining and interpretation in diffuse large B-cell lymphoma. Leuk Lymphoma 2005; 46: 693–701.

    Article  CAS  Google Scholar 

  27. Chen W, Butler M, Rao PH, Chaganti SR, Louie DC, Dalla-Favera R et al. The t(2;3)(q21;q27) translocation in non-Hodgkin's lymphoma displays BCL6 mutations in the 5′ regulatory region and chromosomal breakpoints distant from the gene. Oncogene 1998; 17: 1717–1722.

    Article  CAS  Google Scholar 

  28. Bosga-Bouwer AG, Haralambieva E, Booman M, Boonstra R, van den Berg A et al. BCL6 alternative translocation breakpoint cluster region associated with follicular lymphoma grade 3B. Genes Chromosomes Cancer 2005; 44: 301–304.

    Article  CAS  Google Scholar 

  29. Greiner TC, Smith LM, Rosenwald A, Weisenburger DW, Gascoyne R, Connor J et al. mRNA expression patterns in p53 mutant vs. wildtype subgroups of diffuse large B-cell lymphoma. Blood 2003; 102, [Abstract# 1338].

  30. Greiner TC . Enhanced detection of TP53 mutations utilizing a GC-clamp in denaturing high performance liquid chromatography. Diagn Mol Pathol 2007; 16: 32–37.

    Article  CAS  Google Scholar 

  31. Shaffer AL, Yu X, He Y, Boldrick J, Chan EP, Staudt LM . BCL-6 represses genes that function in lymphocyte differentiation, inflammation, and cell cycle control. Immunity 2000; 13: 199–212.

    Article  CAS  Google Scholar 

  32. Phan RT, Dalla-Favera R . The BCL6 proto-oncogene suppresses p53 expression in germinal-centre B cells. Nature 2004; 432: 635–639.

    Article  CAS  Google Scholar 

  33. Phan RT, Saito M, Basso K, Niu H, Dalla-Favera R . BCL6 interacts with the transcription factor Miz-1 to suppress the cyclin-dependent kinase inhibitor p21 and cell cycle arrest in germinal center B cells. Nat Immunol 2005; 6: 1054–1060.

    Article  CAS  Google Scholar 

  34. Li Z, Wang X, Yu RY, Ding BB, Yu JJ, Dai XM et al. BCL-6 negatively regulates expression of the NF-kappaB1 p105/p50 subunit. J Immunol 2005; 174: 205–214.

    Article  CAS  Google Scholar 

  35. Capello D, Vitolo U, Pasqualucci L, Quattrone S, Migliaretti G, Fassone L et al. Distribution and pattern of BCL-6 mutations throughout the spectrum of B-cell neoplasia. Blood 2000; 95: 651–659.

    CAS  PubMed  Google Scholar 

  36. Lossos IS, Levy R . Mutation analysis of the 5′ noncoding regulatory region of the BCL-6 gene in non-Hodgkin lymphoma: evidence for recurrent mutations and intraclonal heterogeneity. Blood 2000; 95: 1400–1405.

    CAS  PubMed  Google Scholar 

  37. Artiga MJ, Saez AI, Romero C, Sanchez-Beato M, Mateo MS, Navas C et al. A short mutational hot spot in the first intron of BCL-6 is associated with increased BCL-6 expression and with longer overall survival in large B-cell lymphomas. Am J Pathol 2002; 160: 1371–1380.

    Article  CAS  Google Scholar 

  38. Jardin F, Ruminy P, Parmentier F, Picquenot JM, Courel MN, Bertrand P et al. Clinical and biological relevance of single-nucleotide polymorphisms and acquired somatic mutations of the BCL6 first intron in follicular lymphoma. Leukemia 2005; 19: 1824–1830.

    Article  CAS  Google Scholar 

  39. Takeda N, Arima M, Tsuruoka N, Okada S, Hatano M, Sakamoto A et al. Bcl6 is a transcriptional repressor for the IL-18 gene. J Immunol 2003; 171: 426–431.

    Article  CAS  Google Scholar 

  40. Toney LM, Cattoretti G, Graf JA, Merghoub T, Pandolfi PP, Dalla-Favera R et al. BCL-6 regulates chemokine gene transcription in macrophages. Nat Immunol 2000; 1: 214–220.

    Article  CAS  Google Scholar 

  41. Chen YW, Liang AC, Au WY, Chu KM, Wong KY, Hu X et al. Multiple BCL6 translocation partners in individual cases of gastric lymphoma. Blood 2003; 102: 1931–1932, author reply 1932.

    Article  CAS  Google Scholar 

  42. Xu WS, Liang RH, Srivastava G . Identification and characterization of BCL6 translocation partner genes in primary gastric high-grade B-cell lymphoma: heat shock protein 89 alpha is a novel fusion partner gene of BCL6. Genes Chromosomes Cancer 2000; 27: 69–75.

    Article  CAS  Google Scholar 

  43. Akasaka T, Miura I, Takahashi N, Akasaka H, Yonetani N, Ohno H et al. A recurring translocation, t(3;6)(q27;p21), in non-Hodgkin's lymphoma results in replacement of the 5′ regulatory region of BCL6 with a novel H4 histone gene. Cancer Res 1997; 57: 7–12.

    CAS  PubMed  Google Scholar 

  44. Baron BW, Anastasi J, Montag A, Huo D, Baron RM, Karrison T et al. The human BCL6 transgene promotes the development of lymphomas in the mouse. Proc Natl Acad Sci USA 2004; 101: 14198–14203.

    Article  CAS  Google Scholar 

  45. Malpeli G, Barbi S, Moore PS, Scardoni M, Chilosi M, Scarpa A et al. Primary mediastinal B-cell lymphoma: hypermutation of the BCL6 gene targets motifs different from those in diffuse large B-cell and follicular lymphomas. Haematologica 2004; 89: 1091–1099.

    CAS  PubMed  Google Scholar 

  46. Miki T, Kawamata N, Hirosawa S, Aoki N . Gene involved in the 3q27 translocation associated with B-cell lymphoma, BCL5, encodes a Kruppel-like zinc-finger protein. Blood 1994; 83: 26–32.

    CAS  PubMed  Google Scholar 

  47. Offit K, Lo Coco F, Louie DC, Parsa NZ, Leung D, Portlock C et al. Rearrangement of the bcl-6 gene as a prognostic marker in diffuse large-cell lymphoma. N Engl J Med 1994; 331: 74–80.

    Article  CAS  Google Scholar 

  48. Katzenberger T, Ott G, Klein T, Kalla J, Muller-Hermelink HK, Ott MM . Cytogenetic alterations affecting BCL6 are predominantly found in follicular lymphomas grade 3B with a diffuse large B-cell component. Am J Pathol 2004; 165: 481–490.

    Article  CAS  Google Scholar 

  49. Ye BH, Chaganti S, Chang CC, Niu H, Corradini P, Chaganti RS et al. Chromosomal translocations cause deregulated BCL6 expression by promoter substitution in B cell lymphoma. EMBO J 1995; 14: 6209–6217.

    Article  CAS  Google Scholar 

  50. Akasaka T, Ueda C, Kurata M, Akasaka H, Yamabe H, Uchiyama T et al. Nonimmunoglobulin (non-Ig)/BCL6 gene fusion in diffuse large B-cell lymphoma results in worse prognosis than Ig/BCL6. Blood 2000; 96: 2907–2909.

    CAS  PubMed  Google Scholar 

  51. Ueda C, Uchiyama T, Ohno H . Immunoglobulin (Ig)/BCL6 versus non-Ig/BCL6 gene fusion in diffuse large B-cell lymphoma corresponds to a high- versus low-level expression of BCL6 mRNA. Blood 2002; 99: 2624–2625.

    Article  CAS  Google Scholar 

  52. Ueda C, Akasaka T, Kurata M, Maesako Y, Nishikori M, Ichinohasama R et al. The gene for interleukin-21 receptor is the partner of BCL6 in t(3;16)(q27;p11), which is recurrently observed in diffuse large B-cell lymphoma. Oncogene 2002; 21: 368–376.

    Article  CAS  Google Scholar 

  53. Davis RE, Brown KD, Siebenlist U, Staudt LM . Constitutive nuclear factor kappaB activity is required for survival of activated B cell-like diffuse large B cell lymphoma cells. J Exp Med 2001; 194: 1861–1874.

    Article  CAS  Google Scholar 

  54. Feuerhake F, Kutok JL, Monti S, Chen W, LaCasce AS, Cattoretti G et al. NFkappaB activity, function, and target-gene signatures in primary mediastinal large B-cell lymphoma and diffuse large B-cell lymphoma subtypes. Blood 2005; 106: 1392–1399.

    Article  CAS  Google Scholar 

  55. Niu H, Ye BH, Dalla-Favera R . Antigen receptor signaling induces MAP kinase-mediated phosphorylation and degradation of the BCL-6 transcription factor. Genes Dev 1998; 12: 1953–1961.

    Article  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported in part by US Public Health Service grants CA36727 and CA84967 awarded by the National Cancer Institute, Department of Health and Human Services and Lymphoma Research Foundation.

Author information

Authors and Affiliations

Authors

Consortia

Corresponding author

Correspondence to W C Chan.

Additional information

Supplementary Information accompanies the paper on the Leukemia website (http://www.nature.com/leu)

Supplementary information

Rights and permissions

Reprints and permissions

About this article

Cite this article

Iqbal, J., Greiner, T., Patel, K. et al. Distinctive patterns of BCL6 molecular alterations and their functional consequences in different subgroups of diffuse large B-cell lymphoma. Leukemia 21, 2332–2343 (2007). https://doi.org/10.1038/sj.leu.2404856

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/sj.leu.2404856

Keywords

This article is cited by

Search

Quick links