Original Article
Leukemia (2006) 20, 840–846. doi:10.1038/sj.leu.2404145; published online 23 February 2006
High-resolution genome-wide array-based comparative genome hybridization reveals cryptic chromosome changes in AML and MDS cases with trisomy 8 as the sole cytogenetic aberration
K Paulsson1, M Heidenblad1, B Strömbeck1, J Staaf2, G Jönsson2, Å Borg2,3, T Fioretos1 and B Johansson1
- 1Department of Clinical Genetics, Lund University Hospital, Lund, Sweden
- 2Department of Oncology, Lund University Hospital, Lund, Sweden
- 3Lund Strategic Research Center for Stem Cell Biology and Cell Therapy, Lund University, Lund, Sweden
Correspondence: Dr K Paulsson, Department of Clinical Genetics, University Hospital, Lund SE-221 85, Sweden. E-mail: kajsa.paulsson@med.lu.se
Received 15 November 2005; Revised 12 January 2006; Accepted 17 January 2006; Published online 23 February 2006.
Abstract
Although trisomy 8 as the sole chromosome aberration is the most common numerical abnormality in acute myeloid leukemia (AML) and myelodysplastic syndromes (MDS), little is known about its pathogenetic effects. Considering that +8 is a frequent secondary change in AML/MDS, cryptic – possibly primary – genetic aberrations may occur in cases with trisomy 8 as the apparently single anomaly. However, no such hidden anomalies have been reported. We performed a high-resolution genome-wide array-based comparative genome hybridization (array CGH) analysis of 10 AML/MDS cases with isolated +8, utilizing a 32K bacterial artificial chromosome array set, providing >98% coverage of the genome with a resolution of 100 kb. Array CGH revealed intrachromosomal imbalances, not corresponding to known genomic copy number polymorphisms, in 4/10 cases, comprising nine duplications and hemizygous deletions ranging in size from 0.5 to 2.2 Mb. A 1.8 Mb deletion at 7p14.1, which had occurred prior to the +8, was identified in MDS transforming to AML. Furthermore, a deletion including ETV6 was present in one case. The remaining seven imbalances involved more than 40 genes. The present results show that cryptic genetic abnormalities are frequent in trisomy 8-positive AML/MDS cases and that +8 as the sole cytogenetic aberration is not always the primary genetic event.
Keywords:
acute myeloid leukemia, myelodysplastic syndromes, trisomy 8, chromosome aberration, array CGH
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