Original Article

Leukemia (2006) 20, 840–846. doi:10.1038/sj.leu.2404145; published online 23 February 2006

High-resolution genome-wide array-based comparative genome hybridization reveals cryptic chromosome changes in AML and MDS cases with trisomy 8 as the sole cytogenetic aberration

K Paulsson1, M Heidenblad1, B Strömbeck1, J Staaf2, G Jönsson2, Å Borg2,3, T Fioretos1 and B Johansson1

  1. 1Department of Clinical Genetics, Lund University Hospital, Lund, Sweden
  2. 2Department of Oncology, Lund University Hospital, Lund, Sweden
  3. 3Lund Strategic Research Center for Stem Cell Biology and Cell Therapy, Lund University, Lund, Sweden

Correspondence: Dr K Paulsson, Department of Clinical Genetics, University Hospital, Lund SE-221 85, Sweden. E-mail: kajsa.paulsson@med.lu.se

Received 15 November 2005; Revised 12 January 2006; Accepted 17 January 2006; Published online 23 February 2006.

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Abstract

Although trisomy 8 as the sole chromosome aberration is the most common numerical abnormality in acute myeloid leukemia (AML) and myelodysplastic syndromes (MDS), little is known about its pathogenetic effects. Considering that +8 is a frequent secondary change in AML/MDS, cryptic – possibly primary – genetic aberrations may occur in cases with trisomy 8 as the apparently single anomaly. However, no such hidden anomalies have been reported. We performed a high-resolution genome-wide array-based comparative genome hybridization (array CGH) analysis of 10 AML/MDS cases with isolated +8, utilizing a 32K bacterial artificial chromosome array set, providing >98% coverage of the genome with a resolution of 100 kb. Array CGH revealed intrachromosomal imbalances, not corresponding to known genomic copy number polymorphisms, in 4/10 cases, comprising nine duplications and hemizygous deletions ranging in size from 0.5 to 2.2 Mb. A 1.8 Mb deletion at 7p14.1, which had occurred prior to the +8, was identified in MDS transforming to AML. Furthermore, a deletion including ETV6 was present in one case. The remaining seven imbalances involved more than 40 genes. The present results show that cryptic genetic abnormalities are frequent in trisomy 8-positive AML/MDS cases and that +8 as the sole cytogenetic aberration is not always the primary genetic event.

Keywords:

acute myeloid leukemia, myelodysplastic syndromes, trisomy 8, chromosome aberration, array CGH

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