Perspective

Journal of Investigative Dermatology (2008) 128, 776–782; doi:10.1038/sj.jid.5700986

A Systems Biology Approach to Anatomic Diversity of Skin

John L Rinn1, Jordon K Wang1, Helen Liu1, Kelli Montgomery2, Matt van de Rijn2 and Howard Y Chang1

  1. 1Program in Epithelial Biology, Department of Dermatology, Stanford University, Stanford, California, USA
  2. 2Program in Epithelial Biology, Department of Pathology, Stanford University, Stanford, California, USA

Correspondence: Professor Howard Y. Chang, CCSR2155c, 269 Campus Drive, Stanford, California 94305, USA. E-mail: howchang@stanford.edu

Received 15 February 2007; Revised 10 April 2007; Accepted 5 May 2007.

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Abstract

Human skin exhibits exquisite site-specific morphologies and functions. How are these site-specific differences specified during development, maintained in adult homeostasis, and potentially perturbed by disease processes? Here, we review progress in understanding the anatomic patterning of fibroblasts, a major constituent cell type of the dermis and key participant in epithelial–mesenchymal interactions. The gene expression programs of human fibroblasts largely reflect the superimposition of three gene expression profiles that demarcate the fibroblast's position relative to three developmental axes. The HOX family of homeodomain transcription factors is implicated in specifying site-specific transcriptional programs. The use of gene, tiling, and tissue microarrays together gives a comprehensive view of the gene regulation involved in patterning the skin.

Abbreviations:

EC, endothelial cell; nt, nucleotide

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