Original Article
Subject Categories: Genetics
Journal of Investigative Dermatology (2007) 127, 312–318. doi:10.1038/sj.jid.5700506; published online 30 November 2006
Follow-Up Analysis of PSORS9 in 151 Chinese Families Confirmed the Linkage to 4q31–32 and Refined the Evidence to the Families of Early-Onset Psoriasis
Kai-Lin Yan1,2,7, Wei Huang3,7, Xue-Jun Zhang1,2, Sen Yang1,2, Yu-Ming Chen4, Feng-Li Xiao1,2, Xing Fan1,2, Min Gao1,2, Yong Cui1,2, Guo-Long Zhang1,2, Liang-dan Sun1,2, Pei-Guang Wang1,2, Jian-Jun Chen1,2, Wei Li1,2, Ze-hua Chen4, Zhi-Min Wang3,5, Da-zhi Wang3, Kai-Yue Zhang3 and Jian-Jun Liu1,2,6
- 1Institute of Dermatology & Department of Dermatology at No.1 Hospital, Anhui Medical University, Hefei, China
- 2The Key Laboratory of Gene Resource Utilization for Severe Diseases, Ministry of Education, Hefei, China
- 3Chinese National Human Genome Center at Shanghai, Shanghai, China
- 4Department of Statistics & Applied Probability, National University of Singapore, Singapore, Singapore
- 5State Key Laboratory of Genetic Engineering and Center for Anthropological Studies, School of Life Sciences, Fudan University, Shanghai, China
- 6Genome Institute of Singapore, Singapore, Singapore
Correspondence: Professor Xue-Jun Zhang, Institute of Dermatology, Anhui Medical University, 69 Meishan Road, Hefei, Anhui 230032, PR China. E-mail: ayzxj@vip.sina.com; Dr Jian-Jun Liu, Genome Institute of Singapore, Singapore, Singapore. E-mail: liuj3@gis.a-star.edu.sg
7These two authors contributed equally to the work
Received 9 March 2006; Revised 9 May 2006; Accepted 12 June 2006; Published online 30 November 2006.
Abstract
Psoriasis linkage to 4q28–32 (PSORS9) was initially identified by our genome-wide scan in 61 Chinese families and subsequently supported by a meta-analysis of five genome-wide linkage scans of European populations. In this study, we performed a follow-up analysis of PSORS9 using an additional 90 families and improved marker coverage. Joint analysis of all 151 families obtained significant linkage evidence (HLOD=4.53, nonparametric linkage (NPL)=4.03 (P=0.000003)) at the marker interval D4S2997–D4S3033, and the same was obtained for the analysis of the independent new families (HLOD=4.33, NPL=3.15 (P=0.00004)). The linkage evidences from the whole families and the new families exceeded the genome-wide criteria for significant linkage. Furthermore, by performing an ordered subset analysis using mean age at onset as a covariate, we demonstrated that evidence for linkage to PSORS9 is concentrated in the early-onset families and suggested that further study of PSORS9 should focus on early-onset patients. This finding is contradictory to what was found in the Icelandic population and, together with other linkage results, suggests that Chinese and European populations are genetically different for linkage to PSORS9, which may partially explain the influence of ethnic factors on the varying prevalence of psoriasis.
Abbreviations:
AAO, age at onset; NPL, nonparametric linkage; OSA, ordered subset analysis
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