Reciprocal molecular cross-talk between the mesenchyme and the epithelium is essential to appendage formation and often maintenance of this interaction is required to keep the tissues in a differentiated state. A good example of this phenomenon is the cycling of the hair follicle. Hair-shaft production occurs throughout adult life in a cyclical manner. Hair-shaft growth during anagen is the result of the interaction between the epithelial matrix cells and the mesenchymal condensation called the dermal papilla (DP). These interactions periodically cease to allow remodelling of the hair follicle at catagen to occur. After a resting period (telogen), the DP interacts with the remaining hair-follicle progenitor cells and instructs them to produce a new hair-forming structure (Cotsarelis et al, 1990).
The DP has a central role as a source of secreted factors that act upon the overlying epithelial matrix cells causing them to proliferate and differentiate to produce the concentric cell layers of the hair shaft (Paus, 1998). The importance of the DP is highlighted by its removal by wounding rat vibrissae, which leads to the complete cessation of hair-shaft growth (Jahoda and Oliver, 1984a). Growth of the hair shaft, however, is later re-established, presumably via the de novo production of a new DP (Jahoda and Oliver, 1984b). It is believed that this is due to the recruitment of non-inductive cells from the adjacent dermal sheath (DS) by the action of the remaining matrix cells (Jahoda and Reynolds, 2001). This classic observation leads to three interesting postulates. First, that the DP and DS are closely related tissues; secondly, transient gene expression differences in the DP that are caused by the influence of the matrix lead to hair-shaft formation. Thirdly and most importantly, genes expressed in the DP because of the interaction between the matrix and the DP should be lost when the DP is removed from the inductive environment.
Many of the genes whose expression is critical to hair-shaft formation and the cycling of the hair follicle are classical developmental genes discovered in model systems such as Xenopus and Drosophila, in particular, secreted factors of the WNT and bone morphogenetic protein (BMP) families. Active WNT signalling has been observed in all sites of epithelial–mesenchymal interaction (Maretto et al, 2003) and activation of canonical WNT signalling, via the adhesion protein/transcription factor
-catenin, is also critical for the switching of keratinocytes from an epidermal to a hair-shaft-forming fate (Huelsken et al, 2001;Niemann et al, 2002) at the end of telogen and throughout anagen. Local activation of lymphoid enhancing factor (LEF1) is observed in the precortex of the hair follicle (DasGupta and Fuchs, 1999), as well as in the matrix and DP (Maretto et al, 2003). Additionally, canonical WNT signalling is required to maintain cultured DP cells in an inductive state (Kishimoto et al, 2000), but interestingly is unable to recapitulate inductive ability in long-term cultured papilla-enriched cell populations (Shimizu and Morgan, 2004).
BMPs are morphogens whose expression levels specify tissue identity during early development (Jones and Smith, 1998). It is not surprising that control of BMP-signalling levels is important in the development of the hair follicle. Overexpression of the BMP antagonist noggin leads to severe malformation of the hair shaft and an apparent lack of hair-shaft differentiation (Kulessa et al, 2000). Conversely, noggin null mice demonstrate retarded hair-follicle development until their perinatal death (Botchkarev et al, 1999).
Recent attempts to characterize gene expression in the DP have relied upon the expansion of cell number by repeated passages in culture (Sleeman et al, 2000). According to the above postulate, many important genes expressed in anagen would not be present in DP cells in culture, and therefore they do not accurately model the in vivo status of the DP in an anagen hair follicle.
In this paper, we use microarray hybridization to analyze the gene expression profiles of DP and DS from freshly microdissected rat vibrissae, to identify genes expressed in the DP because of its interaction with the matrix. A number of known genes that modulate BMP and transforming growth factor
(TGF
signalling, as well as an orthologue of the Xenopus-secreted protein, Wise, a context-dependent modulator of WNT signalling;Itasaki et al, 2003) were expressed in the DP during anagen. Many signalling molecules such as BMP4 and Inhibin A were expressed both in the DP and DS. Wise expression was interaction dependent as it rapidly decreased in DP cells in culture. Wise overexpression led to downregulation of BMP and TGF
signalling in addition to enhancing WNT signalling. Widespread expression of Wise was observed during morphogenesis both in the developing DP and the downgrowing epithelium of the developing hair follicle. Wise expression was particularly high in the precortex and the bulge region during anagen. We observed cyclic changes in the expression of Wise in the vibrissa, with Wise expression lost in the DP and epithelium in catagen, potentially mirroring what occurred to Wise expression in DP cell culture.
Results
The gene expression profile of the DP reflects the signalling environment in the base of the hair follicle during anagen
The DP and the DS comprise the contiguous follicular dermis, the outermost layer of the hair follicle. In the rat vibrissae as the DS is separated from the hair-follicle epithelium by a glassy membrane (Figure 1a), we hypothesized that any genes that were exclusively expressed in the DP during anagen would be expressed as the result of reciprocal interactions between the DP and the matrix epithelium. To identify these genes we performed microarray hybridization analyses comparing the expression of over 8000 genes in RNA from pooled freshly dissected DP and DS from male brown Norway rats. Twenty-three genes were expressed at higher levels in the DP based on a statistical analysis of the expression data (Table S1). Consistent with the hypothesis that genes were induced in the DP during anagen, no genes were consistently expressed at higher levels in the DS.
Figure 1.
Outlines of the dissections for hybridization and confirmation of selected hybridization results by RT-PCR. (A) Schematic of a hair follicle showing the major tissues and outlining the dissections used in the hybridization experiments. The horizontal line shows the level of transection below which DP and DS are obtained (gray tissues). ORS, outer root sheath; IRS, inner root sheath; HS, hair shaft; DP, dermal papilla; DS, dermal sheath. (B) Conformation of differential expression for selected genes upregulated in the DP.
smooth muscle actin (AMSA), NCAM, and
-actin were used as hair follicle mesenchyme and loading controls. (C) Expression of Igfbp2 in the mid-anagen vibrissa, showing both DP and epithelial staining. (D) Expression of ID3 in the mid-anagen vibrissa is restricted to the follicular mesenchyme and is increased in the tip of the DP. (E) Vimentin expression in the mid-anagen vibrissa. Scale bar, 100
m.
Over 50% of the induced in the anagen DP encoded-secreted factors. Protease nexin 1 (Yu et al, 1995), a well-characterized DP marker, was induced as well as the fasciclin-like protein periostin, the SPARC-like gene (SC1/Ecm2), fibulin 5, fibronectin1, and versican, which are all involved in cell adhesion (Adams and Watt 1990;du Cros et al, 1995;Girard and Springer, 1995;Gillan et al, 2002;Schiemann et al, 2002). Interestingly, the rat orthologue of Xenopus Wise, a modulator of WNT signalling (Itasaki et al, 2003) was the most highly induced gene in the DP.
Other DP-induced genes modulated the major signalling pathways active in the hair follicle. The procollagenase-C-proteinase (Pcolce) enhancer protein enhances the ability of the tolloid-like protein BMP1 to inactivate BMP signalling (Hulmes et al, 1997). The latent TGF
-binding protein 1 (Ltbp1) binds TGF
, inactivating it in the latent-associated complex (Taipale et al, 1994), whereas the insulin growth factor-binding protein 2 (Igfbp2) performs a similar role with the insulin-like growth factors (Zhou and Bondy, 1992). Interestingly, various members of the inhibitor of DNA-binding (Id) gene family were also induced in the DP.
Over 1300 genes were determined to be present in DP and DS but were not differentially expressed (Table S2). Although the vast majority of these genes were housekeeping/metabolic control genes, a number of them encoded proteins that are modulated by the DP-induced genes. For example, the insulin growth factors (IGF) 1 and 2 were expressed in both DP and DS. Some genes were notably absent, for example, the BMP inhibitor Noggin was present on the chip, but not detected. WNT 5a and 4 were, however, not present on the array, but we have detected expression in the DP and DS by RT-PCR previously (O'Shaughnessy et al, unpublished). Also, the well-described markers of follicular dermis, alkaline phosphatase, and smooth muscle actin were present in both the DP and DS. RT-PCR analysis confirmed differential expression of DP-induced genes (Figure 1b). Expression patterns of known genes that were DP induced or present in both DP and DS were compared. Igfbp2 showed expression in both the matrix cells and the DP but not the DS (Figure 1c), showing that expression in the DP did not preclude expression in the epithelial portion of the hair follicle. In contrast, ID3 was expressed at a higher level in the tip of the DP (Figure 1d). Vimentin, a non-differentially expressed gene was clearly restricted to the follicular dermis but was not differentially expressed (Figure 1e).
Interaction-dependent expression of a subset of genes in DP cells
To test whether the DP–matrix interaction was required for the continued expression of the induced genes at anagen, we performed RT-PCR analysis of serially passaged DP cells with the hypothesis that culture of the DP would eliminate the expression of the gene of interest if it was dependent on factors from the adjacent matrix cells. Furthermore, we would expect expression to be maintained throughout the initial explant stage, where the cultured DP cells still had access to the factors produced by the matrix cells, and then be eliminated after the first passage, where trypsin treatment would degrade any extracellular components in the culture system (Figure 2a). Consistent with this model, Wise expression was maintained during explant and then rapidly declined in subsequent passages, whereas expression of another gene induced in the DP during anagen, the Pcolce, was maintained over two passages (Figure 2b).
Figure 2.
The dermal papilla (DP) explant culture model and RT-PCR of DP cells. (A) Rationale behind the DP cell culture model. Gray scale denotes the degree of interaction-dependent gene expression. The anagen DP in vivo have access to the matrix keratinocytes and the factors produced by these cells (arrows). Upon dissection and initial explant, the fresh DP structures still contain these matrix-derived factors and the explanted cells have access to them, maintaining interaction-dependent expression. Upon passaging, these factors are removed by the proteases used to detach the cells, thus reducing interaction-dependent gene expression. (B) RT-PCR analysis of selected genes in explant culture and subsequent passages.
Full figure and legend (17K)Characterization of rWise and expression of transcripts in the hair follicle
Wise is a secreted cysteine knot-containing protein (Figure 3a), the Xenopus homologue of which is able to modulate signalling by the canonical and non-canonical WNT (Itasaki et al, 2003). As WNT signalling is critical to both the development and the cycling of the hair follicle, we chose this gene for further analysis. Wise transcripts were expressed in the DP, the inner root sheath and strongly in the precortex of both anagen vibrissae (Figure 3b and sense probe, Figure 3c) and pelage follicles (Figure 3d). Expression in the DP in middle anagen in both the vibrissae and pelage follicle was relatively low compared with the precortical region. DP cells, however, clearly show signal with the antisense probe compared with sense controls (Figure 3e and f). A C-terminal Myc-tagged Wise was expressed in a perinuclear vesicular pattern characteristic of secreted proteins (Figure 3g), and was detected in the insoluble fraction of the Triton X-100 (TX) lysate by western blot, together providing evidence that the protein was present in secretory vesicles (Figure 3g). Interestingly, the protein was not detected in the supernatant. Possibly, this could be due to the loss of the epitope by post-translational modification, or, in common with a number of WNT signalling involved proteins (Willert et al, 2003), Wise was not freely soluble.
Figure 3.
Primary sequence and expression of rWise. (A) Primary sequence of rat Wise, the black underline is the secretion motif, the black box is the cysteine knot region, and the gray box is the region to which the AK-1 antibody was raised. (B) Localization of Wise transcripts in the anagen vibrissa. O, outer root sheath; i, inner root sheath; dp, dermal papilla; Hs, hair shaft. (C) Sense control, m, melanin pigment. (D) Detail of dermal papilla cells from anti-sense (AS) and sense (S) hybridizations. (E) Localization of Wise transcripts in the anagen pelage follicle. ors, outer root sheath; ds, dermal sheath. In all cases, the dermal papilla is specified by dotted lines. (F) Expression of Myc-Tagged rWise in 3T3 cells. (G) Western blots of Triton X-100 soluble (s) and insoluble (i) fractions of lysates from WISE- and vector-transfected 3T3 cells incubated with either anti-myc or the AK-1 antibody. IVT, in vitro translation product of rWise RNA. Scale bars, 100
m (B–D) and 10
m (E, F).
An antibody was raised to the C-terminal 20 amino acids of Wise, AK1, and used to probe total lysates from untransfected cells. We detected proteins of 26 and 18 kDa, a similar size to Xenopus Wise with the 26 kDa protein corresponding to the Wise-A subunit of the Xenopus protein and 18 kDa potentially being the result of post-translational modification (Figure 3g andItasaki et al, 2003). In agreement with this, in vitro translation of the Wise RNA, in an assay where post-translational modification was not possible, produced a single protein product of 26 kDa (Figure 3g).
rWise enhances WNT signalling and indirectly inhibits BMP and TGF
signalling
As the rat homologue of Wise was uncharacterized, we performed animal cap explants from Xenopus laevis embryos injected with rat Wise RNA. In caps, the pan-neural marker and WNT target gene NCAM (Sasai et al, 1994) was induced, as was the cement gland marker, and marker of BMP inhibition, CG-13 (Sasai et al, 1994), whereas the forebrain marker Otx-2 (Blitz and Cho, 1995) was not induced (Figure 4a). In whole embryos, however, injection of Wise led to a marked increase in all anterior neural markers. This weak neutralization as well as a concomitant reduction in BMP transcripts is diagnostic of WNT signalling (Baker et al, 1999). To confirm this, we performed RT-PCR on the dorsal and ventral marginal zone (DMZ and VMZ, respectively) of Wise injected early gastrula embryos (Figure 4b). In whole embryos and the DMZ, there was increased expression of the WNT target Siamois (Sasai et al, 1995), whereas in the VMZ and whole embryos, BMP4 transcripts were reduced. Taken together, rWise had a comparable function to the Xenopus orthologue.
Figure 4.
Molecular analysis of Wise expression in Xenopus explants and NIH3T3 cells. (A) Ectodermal explants were grown to late tailbud stages from uninjected and USAG-1-injected embryos (500 pg into each of four blastomeres). Anterior markers were assayed by RT-PCR. (B) Dorsal (DMZ) and ventral marginal zone (VMZ) explants were removed from early gastrulae injected as in (A). Expression of the WNT target Siamois and BMP4 were assayed by RT-PCR. (C–F) Indirect immunofluoresence of Smad 5 (C, D), and Smads 2 and 3 (E, F) on Usag-transfected (C, E) and vector-transfected (D, F) NIH3T3 cells. Scale bar, 50
m. (G) Representative luciferase assay, performed in triplicate on transfected cells. Error bars are 2
standard deviation. (H) Northern blot analysis of Ltbp1 in transfected cells.
-actin is the loading control.
We also investigated downstream signalling from BMP4 and TGF
in Wise-transfected NIH3T3 fibroblasts. Consistent with the experiments in Xenopus, Smad 5, a BMP target, was mostly excluded from the nuclei of transfected cells (figures compared with Figure 4d) whereas expression of the TGF
/activin target Smads 2 and 3 was nuclear in both vector and Wise-transfected cells; however, there was a consistent increase in cytoplasmic Smads 2 and 3 in the Wise-expressing cells (Figure 4e and f). Reporter gene transcription from the TGF
responsive promoter DE-Luc (Germain et al, 2000) was reduced (p<0.05, paired t test), but there was no reduction from an activin-responsive promoter, ARE-Luc (Figure 4g) in the Wise-transfected cells. Since Ltbp1 expression was induced in the anagen DP and would only inhibit TGF
signalling, we tested whether this could be a possible cause of the reduction of nuclear SMAD 2/3 in the 3T3 cells. There was a marked increase in Ltbp1 transcripts compared with untransfected controls (Figure 4h).
Dynamic expression of rWise during hair-follicle morphogenesis
In the 15.0 d post-coitum (dpc) rat snout, there was no pelage hair-follicle development, but the initial stages of vibrissae development were clear as thickenings of the single-cell layer epidermis. At this stage, the expression of Wise was widespread throughout the epidermis and dermis (Figure 5a), although at this stage clear determination of a dermal condensate was not possible. When the nuclei were overlaid in a merged image (Figure 5b), almost all of the Wise staining was associated with the cells. In the developing basal lamina, between the hair placode and the presumptive dermal condensate, there was, however, clear Wise positivity (Figure 5b, arrows).
Figure 5.
Expression of Wise in embryo snout hair follicles and the epidermis. (A) Wise expression in embryonic day 15 snout epidermis showing developing vibrissa. Dotted line shows the separation between dermis and epidermis. (B) Overlay of nuclear counterstain to show cells. Arrowheads show region of Wise expression in the separation between dermis and epidermis. (C) Wise expression in an adjacent region of snout epidermis containing well-developed vibrissa follicles. Dotted lines show dermal papillae. Filled arrowheads point to the high expressing precortical regions, and the empty arrowhead points to the non-expressing outer root sheath. (D) Wise expression in day 17 snout epidermis, showing two follicles in the hair peg stage of differentiation, and a more developed follicle. Large dashed lines denote the basal lamina, and dotted lines delineate the dermal condensate and dermal papilla. (E) Wise expression in E17 epidermis. Dotted line shows basal lamina. (F) Expression of Wise in adult epidermis. Scale bar, 100
m.
In 17.0 dpc embryos, the pelage hair follicles were in various stages of development. By the hair peg stage, there was expression in the DP and the hair peg itself (Figure 5d). At later stages of development, when the DP is surrounded by the epithelium, Wise expression was maintained in both the DP and the epithelium. Later stages of hair-follicle development were represented by the 17.0 dpc vibrissa follicles, which had initiated hair-shaft formation (Figure 5c). Wise expression was reduced slightly in the DP and was markedly increased in the precortex whereas still being absent in the outer root sheath and DS (Figure 5c). Dynamic changes in the epidermis were seen between the developing embryo and the adult. In the 17.0 dpc, embryo there was high expression in both the epidermis and dermis (Figure 5e), which by the adult had reduced significantly in the epidermis, restricted to the basal layer, as well as almost completely eliminated in the dermis (Figure 5f). During the same period, there was the expression of Wise in the outermost periderm layer at 17.0 dpc, whereas in the adult, the expression appeared to be associated with the cornified envelope (Figure 5e and f).
Dynamic expression of Wise during the hair cycle
We examined the expression of Wise in the vibrissae follicle since changes in expression would be more easily determined in the larger DP. In early anagen follicles prior to hair-shaft differentiation, the number of cells in the DP was at a maximum. Furthermore, Wise expression was at its highest, with continuous expression throughout the papilla space (Figure 6a). At this time, expression in the DP was very high compared with the DS (Figure 6a, arrowheads). Wise was also expressed throughout the matrix epithelial cells in the bulb. By mid-anagen (Figure 6b), when hair-shaft formation was fully underway, Wise was expressed at a significantly lower level; in the DP, with expression being largely confined to the cells themselves. There were, however, focal areas of high expression in the DP, notably at the tip of the papilla in proximity to the precortex, which also had very high levels of expression at this time. During catagen, the smaller DP did not express Wise, and the epithelial column near to the papilla expressed low levels of Wise (Figure 6c). Magnification of the DP showed high expression in DP cells and in the intercellular spaces at early anagen (Figure 6d). Expression fell both inside and outside the cell from middle anagen (Figure 6e), falling completely by catagen (Figure 6f). The other compartment that was notably Wise high expressing was the bulge region, comprising the lower epithelium of the very early anagen hair follicle (Figure 6g) and restricted to the outer root sheath cells adjacent to the erector pili muscle in the mid/late anagen hair follicle (Figure 6h).
Figure 6.
Expression of Wise in the cycling vibrissae and pelage hair follicle. (A) Wise expression in the early anagen vibrissae. Arrowhead points to low expressing dermal sheath cells. (B) Wise expression in the mid-anagen vibrissa; arrowheads point to the high expressing regions of the precortex and the dermal papilla (DP). (C) Wise expression in the catagen vibrissae. Arrowheads point to the epithelial column. In all panels the DP is indicated by a dotted line and the red signal is the propidium iodide counterstain. Scale bar, 100
m. (D–F) Magnification of the dermal papilla region of the vibrissae. (D) Early anagen; (E) middle anagen; (F) catagen. Scale bar, 10
m. (G) Expression of Wise in the bulge in the middle anagen follicle. Bracket denotes the bulge region. (H) Expression of Wise in the bulge region near the club hair at anagen onset. Scale bar, 50
m. (I) Schematic of dynamic Wise expression during the hair cycle, gray scale denotes the level of expression.
Discussion
Gene expression and signalling pathways active in the anagen DP
In this paper, we have captured a glimpse of the specific gene expression pathways that are activated in response to interaction of the DP with the overlying matrix cells. It was therefore informative to examine the secreted factors expressed by the DP in the context of the known biology of the hair follicle. Pcolce1 was induced in the DP, and activates BMP1 (Hulmes et al, 1997), the higher vertebrate homologue of the BMP inhibitor tolloid (Suzuki et al, 1996). As Pcolce1 expression was maintained in culture, it is likely that inhibition of BMP signalling is an intrinsic property of DP cells. Ltbp1 was similarly upregulated in the DP during anagen, consistent with the role of TGF
1 in the hair follicle of inducing catagen (Foitzik et al, 2000). Ltbp1 may sequester any TGF
into the latency-associated peptide, and in so doing prolong anagen. Paradoxically, Igfbp2, however, functions by binding IGF1, which has been reported to prolong anagen (Rudman et al, 1997). This suggests there is a balance of opposing signalling pathways that control the length of the anagen phase of the hair cycle.
Many extracellular matrix (ECM) proteins are specifically induced in the DP. It has been proposed that one of the roles of the DP is the production of a specialized ECM (Matsuzaki and Yoshizato, 1998). Our analyses clearly show this is the case, with increased synthesis of developmentally important matrix components such as the SPARC-like gene SC1, an important part of the stem cell niche in the hematopoietic system (Oritani and Kincade, 1998). Fibulin 5, Osf2, versican, and fibronectin all bind integrins (Adams and Watt, 1990;du Cros et al, 1995;Girard and Springer, 1995;Gillan et al, 2002;Schiemann et al, 2002), which would be important in the control of keratinocyte differentiation in the hair shaft.
One surprising finding from the array data was that many signalling molecules typically associated with the DP and hair follicle, namely BMP4, IGF1 and 2, and members of the WNT family (4 and 5a), were expressed in both the DP and DS, whereas it was the modulators of these pathways that were expressed in an interaction-dependent fashion in the anagen DP. It may be that the delicate fine-tuning of the signalling pathways that is necessary during the hair cycle is more easily achieved by varying the concentration of the modulators, rather than altering the absolute levels of the signalling protein itself.
Wise function in the DP, hair follicle, and interfollicular epidermis
Wise binds the WNT co-receptor, LRP6, and can either repress or activate WNT signalling (Itasaki et al, 2003). Our experiments seem to show a similar function for rat Wise. From these experiments, it is, however, not clear whether in the hair follicle, Wise plays a repressive or activatory role in the hair follicle. In the topgal transgenic mouse (DasGupta and Fuchs, 1999), the
-catenin co-transcription factor LEF1 is active at two distinct phases in the hair-follicle cycle, firstly during bulge activation in telogen, and in the precortex in anagen. The expression of Wise we observe in the precortex region exactly agrees to the zone of LEF1 activation in the topgal mouse. Expression in the DP can be explained if we invoke the more recent WNT-signalling reporter mouse described byMaretto et al (2003). Here reporter gene activity in the anagen hair follicle was widespread in the DP and the matrix cells, which was exactly what we observed with Wise expression. LEF1 is unlikely, based on the above findings, to play a role in activating WNT signalling in the DP; however, there is evidence that other Tcf family members and
-catenin are expressed in the DP (Ridanpaa et al, 2001). Cultured DP cells that express WNT 4 and 5a, but are unable to induce follicle induction, do not express Wise, and hence cannot activate WNT signalling, providing a potential explanation for the recent results ofShimizu and Morgan (2004), who found that adding WNT to long-term cultured DP cells is unable to rescue their inductive ability.
The downgrowth of the developing follicle is the result of concomitant WNT signalling and a reduction in BMP signalling (Jamora et al, 2003). This is exactly the effect of rWise expression in the Xenopus, so by extension, Wise is likely to have the same effect in the developing hair follicle, where expression is seen throughout the hair peg. Expression of Wise is widespread in the dermis and epidermis during development, which may be necessary for signalling by large number of WNT family members in the dermis or epidermis to occur during late embryonic development (Reddy et al, 2001). If this is also the case in the adult, then in the follicle, WNT signalling is concentrated in the DP and the Matrix at different times, with WNT signalling in the DP being at a maximum just after the initial onset of anagen, and WNT signalling in the matrix and precortex at a maximum in middle anagen. WNT signalling is virtually absent at catagen. The time-lag in Wise expression in the DP, compared with the precortex, may be a necessary component of the timing of the hair cycle, particularly if, as was the case with Ltbp1, Wise expression caused some, if not all, of the anagen DP gene-specific changes we identified in the microarray screen. Expression of Wise in the bulge region in early anagen argues that Bulge activation causes Wise expression in the downgrowing hair follicle, which activates DP gene expression, which produces a signalling environment that allows for gene expression changes in the matrix to occur to allow hair growth. By this time in the hair cycle, Wise expression has fallen in the DP and hence, as a result, the gene expression changes in the precortex finish, preventing hair-shaft differentiation and eventually leading to catagen (Figure 6i).
Finally Wise is clearly expressed in a non-epithelial/non-mesenchymal population, in the vessels at the base of the hair follicle, and in the basement membrane of the developing hair follicle. There is little or no evidence of a role for WNT signalling in the function of the basement membrane; however, expression of Wise in the basement membrane would be consistent, and necessary for it to function in epithelial–mesenchymal interactions.
Gene expression changes in cultured DP cells
Compared with other gene expression analyses on the DP (Sleeman et al, 2000) many of the same genes were expressed in the DP and cultured DP cells. Although differences between the two analyses were reflected by the fact that there were differences in methodology (EST sequencing vs array hybridization), there were still clear differences in the biology of the in vivo DP and cultured DP cells, even after a single passage. Although there may be trivial reasons for these differences, namely, the contamination of the DP cells with matrix keratinocytes or components of the vasculature, the fact that we detect very low levels of expression of Wise in the passage 1 DP cells would argue against an ectodermal contamination. An equally valid reason would be the culture environment of the DP cells lacking crucial components that the matrix cells provide. This is consistent with the reports that the inductive ability of DP cells can be maintained through many more passages than normal by co-implanting germinative epithelial cells (Reynolds and Jahoda, 1996).
Materials and Methods
Microarray hybridization
DP and DS were obtained from Brown Norway rat vibrissae (Charles River, Wilmington). Thirty of each were pooled for a single experiment. 0.1
g RNA was extracted (RNeasy kit, Qiagen, Valencia, Spain), and poly-A+ RNA was selected using the Oligotex system (Qiagen). Second-strand cDNA was synthesized using the Superscript II kit (Invitrogen, Carlsbad, New Mexico) after the RNA was annealed with a T7 promoter-poly-T primer (Genset, Evry, France). Biotin-labelled cRNA was made from this cDNA (Enzo Diagnostics, Farmingdale, New York). The whole probe was hybridized to the RG34A rat genome chip (Affymetrix, Santa Clara, California) according to the manufacturers' specifications. Three DP hybridizations and two DS hybridzations allowed six crosswise comparisons, with the DS being the baseline in all analyses. Genes that were tagged as present and increased in all six analyses with a p-value of less than or equal to 0.01 by Mann–Whitney analysis, and two or more highly expressed in the DP in absolute terms compared with the DS, were regarded as differentially expressed.
RT-PCR analysis of vibrissal tissue
Differential expression was confirmed with another set of DP and DS by RT-PCR and comparison with loading controls. Comparisons were made between the DP and the matrix component liberated after collagen capsule inversion by RT-PCR. DP used in RT-PCR analysis of Wise expression were explant cultured undisturbed for 11 d, after which they could be serially passaged. Primers were as follows: NCAM F: ATTGTCACCATCATGGGGCT, R: GTGAGCTGCCTTGGATTTTC;
-smooth muscle actin F: TCATTGGGATGGAGTCAGCG, R: CAGCTTCGTCGTATTCCTGT;
-actin F: GTGTGACGTTGACATCCGTA, R: ACTCATCGTACTCCTGCTTG; rWise F: CATGCTTCCTCCTGCCATTCA, R: GGCTCCAGTACTTTGTTCC; protease nexin 1 F: CATCATCCCTCACATCAGTAC, R: GTCACTACTGCGGCTTTGGTC; SC1 F: ACCACCCCATTGAACTTCTC, R: CAAAGAAGCGCGTTATGCAG;CD81 F: ATGGGGGTGGAGGGCTGC, R: GTACACGGAGCTGTTCCGG; SPARC F: CCGAGAGTTCCCAGCATCAT, R: AGCTTGTGGCCCTTCTTGGT.
Immunofluorescence analysis rat embryo snout and vibrissa
Throughout this study, all experiments on animal tissue were performed after institutional approval by Columbia University, and Institutional and national guides for the care and use of laboratory animals were followed. Tissues were embedded in OCT and 8
m sections were fixed in 4% paraformaldehyde in phosphate-buffered saline (PBS), before blocking and permeabilizing in 0.2% fish skin gelatin (Sigma, St Louis, Missouri), 0.4% TX in PBS. Incubations of primary and secondary antibodies were performed in the same solution. The following antibodies and dilutions were used; Goat anti-Igfbp2 (Santa Cruz Biotechnology, Santa Cruz, California), 1/50; rabbit anti-ID3 (Santa Cruz Biotechnology), 1/100 and goat anti-vimentin (Santa Cruz Biotechnology), 1/100; AK-1 (anti-rat Wise), 1/5; swine anti-rabbit (Sigma) 1/100. Donkey anti-goat (Santa Cruz Biotechnology) 1/250. Images were taken using a Zeiss Axiophot microscope and the Axiovision imaging system (Zeiss, Thornwood, New York). Slides were counterstained in a 5 ng per mL solution of propidium iodide in PBS.
In situ hybridization
Sections were fixed as described above. Digoxygenin-labelled RNA probes were synthesized using the RNA synthesis kit (Roche, Basel, Switzerland) from the Wise PCR product cloned into pGemTeasy (Promega, Madison, Wisconsin). No fragmentation of probes was required. Slides were hybridized for 12 h at 60°C, before incubating with an alkaline phosphatase-conjugated sheep anti-digoxygenin antibody (1/2000, Roche) and subsequently incubated in NBT/BCIP solution (tablets from Sigma) until sufficient color development was observed. Sections were post-fixed before microscopic examination.
Analysis of Wise expression and BMP/TGF
signalling in NIH3T3 cells
The full-length rat Wise cDNA was cloned into pcDNA3.1 myc-his (Invitrogen), and transfected in NIH3T3 cells using the lipofectamine plus system (Invitrogen). Cells were selected in Geneticin (G418, Invitrogen). Cells were fixed and permeabilized before antibody incubation. The following antibodies and dilutions were used; anti-SMAD 2/3, and anti-SMAD 5 goat polyclonals (Santa Cruz Biotechnology) both 1/100; anti-myc mouse monoclonal antibody (Sigma) 1/100.
For luciferase reporter assays, selected cells were additionally transfected with either DE-Luc or ARE-Luc (Both tifts from Caroline Hill, Cancer Research UK). Cells were lysed in the cell lysis buffer (Promega), according to manufacturers' instructions. Luciferase buffer (Promega) was added to the lysates and light production was measured. One microgram of total RNA from Wise and vector-transfected cells was loaded onto a formaldehyde gel and blotted. The blot was hybridized with a radiolabelled random hexamer-labelled probe of the Ltbp1 or
-actin PCR product.
Xenopus embryo manipulations, injections, and RT-PCR analysis
Embryos were obtained from in vitro fertilizations, and cultured in 0.1
Barth's modified ringer solution (MMR). Animal cap explants were taken from mid-blastula embryos, and cultured until tailbud stages. Marginal zones were dissected but not cultured prior to RNA extraction. Five nanoliter injections were performed in 4% ficoll, and embryos cultured in 0.1
MMR/4% ficoll. Wise RNA was obtained by transcription using the mMessagemMachine kit (Ambion, Austin, Texas) from the T7 promoter of the cloned and tagged cDNA.
cDNA was synthesized from 10 embryos equivalent of explants or whole embryos. Each single RT-PCR reaction used a 0.5 embryo equivalent. EF1
was used as a loading control in all analyses. The following primers were previously described: EF1a, Sia (Blumberg et al, 1991); NCAM, CG-13 (Sasai et al, 1994); Otx2 (Blitz and Cho, 1995); BMP4 (Dale et al, 1992).
Western blots and in vitro translation
Protein extracts were made from NIH3T3 cells that were either untransfected, vector transfected, or Wise transfected. TX lysis buffer was used. Soluble and insoluble fractions of the TX lysates were loaded onto denaturing polyacrylamide gels and blotted. The following antibody concentration was used in western blots: anti-myc 9E10 1/1000 and AK-1 1/500. In vitro translation was performed using the full-length rWise RNA in a reticulocyte lysate with S35 methionine (Amersham, Cambridge, UK). The resulting product was run on a gel, which was dried, and subjected to autoradiography.
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Acknowledgments
We thank C. J. Whitehouse for critical reading of the paper and Caroline Hill for DE-luc and ARE-luc. This work was funded in part by the Dermatology Foundation (R. O.) and the Steven and Michelle Kirsch Foundation (A. M. C. and C. A. B. J.).



