Regular Article
Journal of Investigative Dermatology (2001) 116, 750–754; doi:10.1046/j.0022-202x.2001.01323.x
The HCR Gene on 6p21 is Unlikely to be a Psoriasis Susceptibility Gene
Kevin P O'Brien, Sofia J Holm, Staffan Nilsson*, Lina Carlén, Tomas Rosenmüller, Charlotta Enerbäck†, Annica Inerot† and Mona Ståhle-Bäckdahl
- Department of Dermatology, Karolinska Hospital, Stockholm, Sweden
- *School of Mathematics and Computing Sciences, Chalmers University of Technology, Gothenburg, Sweden
- †Department of Dermatology, Sahlgrenska University Hospital, Gothenburg, Sweden
Correspondence: Dr Mona Ståhle-Bäckdahl, Department of Dermatology, Karolinska Hospital, S-171 76, Stockholm, Sweden. Email: mba@hud.ks.se
Received 25 September 2000; Revised 15 December 2000; Accepted 29 January 2001.
Abstract
The PSORS1 locus in the human major histocompatibility complex on 6p21 has been consistently associated with psoriasis in populations of diverse ethnicity. The HLA-C allele Cw*0602, located therein, has been found in up to 67% of psoriasis patients but is no longer considered a candidate gene in itself. The
-helix coiled-coil rod homolog gene (HCR, previously Pg8) is located 110 kb from the HLA-C gene, positioned between the CDSN and SC1 genes, within a region thought to harbor a psoriasis gene (PSORS1). We investigated the HCR gene for disease association by direct sequencing of nine polymerase chain reaction products amplified from a series of Swedish psoriasis patients and controls. We found that HCR is a very polymorphic gene with 25 polymorphisms in the open reading frame alone, of which 10 demonstrated disease association; however, the relationship between HCR polymorphisms and HLA-Cw*0602 indicates that HCR cannot truly be considered a likely candidate gene. We investigated Cw*0602 association while stratifying for HCR single nucleotide polymorphisms. We also investigated HCR single nucleotide polymorphism association with the disease while stratifying for the presence of Cw*0602. We found that whichever single nucleotide polymorphism that was stratified for, there was still a strongly significant Cw*0602 association with psoriasis; however, when we stratified for Cw*0602 presence, only one silent polymorphism showed significant association. In a recent similar study this polymorphism was actually found to be decreased in psoriasis individuals. Thus we conclude that HCR polymorphisms display association with psoriasis due to linkage disequilibrium with Cw*0602 and is, therefore, unlikely to be directly involved in the development of psoriasis.
Keywords:
complex disease, genetics, HLA-C, skin disease
Abbreviations:
AA, amino acids; CI, confidence interval; EST, expressed sequence tags; HCR,
-helix coiled-coil rod homolog gene; HLA-C, major histocompatibility complex; class I, C gene



