Original Article

The Journal of Antibiotics (2011) 64, 683–686; doi:10.1038/ja.2011.64; published online 27 July 2011

Ganodermycin, a novel inhibitor of CXCL10 expression from Ganoderma applanatum

Mathias Jung1, Johannes C Liermann2, Till Opatz2 and Gerhard Erkel3

  1. 1Institute of Biotechnology and Drug Research (IBWF), Kaiserslautern, Germany
  2. 2Institute of Organic Chemistry, University of Mainz, Duesbergweg, Mainz, Germany
  3. 3Department of Biotechnology, University of Kaiserslautern, Kaiserslautern, Germany

Correspondence: Dr G Erkel, Department of Biotechnology, University of Kaiserslautern, Paul-Ehrlich-Strasse 23, Kaiserslautern D-67663, Germany. E-mail: erkel@ibwf.de

Received 10 March 2011; Revised 25 May 2011; Accepted 17 June 2011; Published online 27 July 2011.



CXCL10 (inducible protein-10) is a highly inducible chemoattractant, which contributes to the recruitment of inflammatory cells, such as macrophages and T-lymphocytes, and thereby has important roles in chronic inflammatory conditions. In a search for new inhibitors of CXCL10 expression in MonoMac6 cells, a novel compound, designated as Ganodermycin, was isolated from fermentations of the basidiomycete Ganoderma applanatum. The structure was determined by a combination of spectroscopic techniques. Ganodermycin inhibited the lipopolysaccharide (LPS)/interferon (IFN)-γ-induced CXCL10 promoter activity in transiently transfected MonoMac6 cells in a dose-dependent manner with IC50 values of 15–20μgml−1 (53–71μM). Ganodermycin also reduced LPS/IFN-γ-induced CXCL10 protein synthesis and excretion.


CXCL10; Ganoderma; inhibitor; new metabolite



CXCL10/interferon (IFN)-γ-inducible protein-10, a member of the non-ELR CXC chemokine family, is a critical component of immune responses by acting as a chemoattractant for activated natural killer and Th1 cells into sites of inflammation. CXCL10 is produced by several cell types, such as endothelial cells, keratinocytes, eosinophil and neutrophils. Furthermore, it is produced by cells of the monocytic system (macrophages and monocytes), which have a major role in immune defense by presenting processed antigens to T cells, phagocytosis of foreign material and coordination of the immune response by secretion of cytokines and chemokines. CXCL10 also participates in the regulation of T-cell responses due to modulation of T-cell proliferation in response to an antigenic challenge and favoritism of Th1-type cytokine production while downregulating Th2 cytokines.1, 2, 3 The chemokine was first identified as an early response gene induced by IFN-γ in a variety of cells but it can also be induced by IFN-α and IFN-β, as well as by bacterial lipopolysaccharide (LPS). Although essential for effective host defense against infections, an increased expression of CXCL10 may also contribute to the induction and exacerbation of chronic inflammatory reactions associated with graft rejection or allergic and autoimmune diseases.3 An increased expression of CXCL10 has been observed in patients with COPD, asthma and in acute inflammation in response to pathogens. Furthermore, CXCL10 has been reported to occur in higher levels in patients with inflammatory bowel diseases, as well as in the serum and synovial fluid of rheumatoid arthritis patients.3, 4 The expression of CXCL10 is mainly regulated at the transcriptional level by the activation of the nuclear factor (NF)-κB, STAT1 and IRF-3 transcription factors after cytokine induction and engagement of the Toll-like receptors by LPS.5

Therefore, CXCL10 might be an attractive target for the development of new therapeutics against various inflammatory conditions including inflammatory bowel disease or rheumatoid arthritis.6 In a screening of fungal extracts inhibiting the inducible CXCL10 promoter activity, we found that Ganoderma applanatum produced a new metabolite with inhibitory activity on the CXCL10 promoter-dependent luciferase reporter gene expression in transiently transfected MonoMac6 cells. In this paper, the fermentation, structure elucidation and some biological properties of the compound that we have named ganodermycin are described.


Results and Discussion


Strain IBWF09003 was isolated from fruiting bodies collected in French Guiana and showed the typical morphological characteristics of the genus Ganoderma. The strain was identified by internal transcribed spacer (ITS) sequence comparison. The ITS sequence was 100% identical to Ganoderma applanatum ITS1-5.8S rDNA-ITS2 (GenBank Accession No.: AY884179.1).

Structure elucidation

Ganodermycin was isolated from the culture fluid extract by bioactivity-guided fractionation as described in the experimental section. Mass spectrometric data gave an elemental composition of C15H20O5, requiring six unsaturations and giving evidence for a sesquiterpenoid structure. The 13C NMR spectrum gave two olefinic carbon resonances at 155.9 and 138.4p.p.m., respectively, along with a ketone carbonyl at 197.5p.p.m. and an aldehyde carbonyl at 194.8p.p.m. The proton at 6.88p.p.m., bound to the carbon resonating at 138.4p.p.m. as judged by HSQC, showed heteronuclear multiple bond correlation (HMBC, Figure 1) to all aforementioned carbon atoms, suggesting a derivative of fumaraldehyde. HMBC contacts from the aldehyde proton and the olefinic proton showed that the quaternary olefinic carbon was bound to a methine carbon atom, which was part of a cyclohexane-4-carboxylic acid moiety. The ketone carbonyl of the endione fragment was HMBC correlated to a methine proton at 3.51p.p.m., being part of an oxirane with two geminal methyl groups bound to the other carbon.

Figure 1.
Figure 1 - Unfortunately we are unable to provide accessible alternative text for this. If you require assistance to access this image, please contact help@nature.com or the author

The 2D NMR correlations found for ganodermycin.

Full figure and legend (46K)

The double bond's E-configuration was evident from correlations between the aldehyde proton and the olefinic proton in the NOESY spectrum. The residues on the cyclohexane are trans to each other, as both methine protons in the ring (3.22 and 2.41p.p.m.) exhibited large coupling constants of around 12Hz, which requires axial positions in both cases. The resulting stereochemistry was confirmed by the analysis of the relevant NOESY contacts (Figure 1). Matching coupling constants and chemical shifts were reported for juvabione analogs7 and hymenoic acid.8 The relative configuration of the stereogenic center in the oxirane unit could, however, not be determined.

There are some examples of other sesquiterpenoids,7, 8, 9 as well as diterpenes,10, 11 with cyclohexane carboxylic acid fragments. The structure of ganodermycin is also related to juvabione, a juvenile hormone from balsam fir.12

Biological activity

To search for compounds and to characterize the influence of ganodermycin on CXCL10 expression, we used a human CXCL10 promoter-dependent transcriptional reporter in transiently transfected monocytic MonoMac6 cells, which reflects the activation of the transcription factors binding to the regulatory sites of the CXCL10 gene. Cells of the monocytic system (macrophages and monocytes) form a central part in immune defense by presenting processed antigen to T cells, phagocytosis of foreign material and orchestrating the immune response by secretion of cytokines. Typically, these cells, when triggered by an immunogen, produce proinflammtory cytokines (for example, tumor necrosis factor-α, interleukin-1β and interleukin-6), chemokines (for example, CXCL10 and CXCL8) and proinflammtory enzymes (for example, COX-2).13 Transfection of MonoMac6 cells with a hCXCL10 promoter-driven luciferase reporter plasmid and stimulation with 1μgml−1 LPS and 10ngml−1 IFN-γ increased luciferase activity 8- to 10-fold compared with non-stimulated cells. As shown in Figure 2a, the inducible promoter activity was dose dependently inhibited by ganodermycin with IC50 values of 15–20μgml−1 (53–71μM). The response of the 972-bp CXCL10 promoter construct largely depends on two proximal NF-κB-, three distal IFN-stimulated response elements and two Stat recognition sites.14 We therefore investigated the effect of ganodermycin on NF-κB-, Stat1- and IFN-stimulated response element-driven expression of the reporter gene luciferase in LPS/IFN-γ-stimulated MonoMac6 cells. As shown in Figure 2a, the Stat1-driven expression of the reporter gene was preferentially inhibited by ganodermycin with IC50 values of 5–10μgml−1 (18–36μM), whereas the NF-κB- and IFN-stimulated response element-dependent transcriptional reporters were inhibited with IC50 values of 20μgml−1 (71μM). The constitutive activity of the EF-1α-promoter-driven expression of the reporter gene renilla luciferase was not affected up to a concentration of 30μgml−1 (106μM) ganodermycin, indicating that the compound does not interfere with transcription in a general manner.

Figure 2.
Figure 2 - Unfortunately we are unable to provide accessible alternative text for this. If you require assistance to access this image, please contact help@nature.com or the author

Effect of ganodermycin on CXCL10 promoter activity and expression. (a) MonoMac6 cells were transiently transfected with a CXCL10, nuclear factor-κB, STAT1, interferon (IFN)-stimulated response element or EF1α promoter-dependent reporter construct and stimulated with 1μgml−1 lipopolysaccharide (LPS) and 10ngml−1 IFN-γ for 4h with or without ganodermycin. Control (100%): stimulation only. The expression of the reporter genes was determined as described in Methods. Results represent the mean±s.e.m. of at least three independent experiments. (b) Effect of ganodermycin on CXCL10 production and cell viability. MonoMac6 cells were pretreated for 1h with or without the test compound and stimulated with 1μgml−1 LPS and 10ngml−1 IFN-γ for additional 16h. CXCL10 concentrations in cell supernatants were determined by enzyme-linked immunosorbent assay. Cell viability was determined by 2,3-bis(2-methoxy-4-nitro-5-sulfophenyl)-2H-tetrazolium-5-carboxanilide sodium colorimetric assay. Data are shown as mean values ±s.e.m. of three independent experiments.

Full figure and legend (74K)

Next, we analyzed the influence of ganodermycin on CXCL10 synthesis and excretion in MonoMac6 cells, which release significant amounts of CXCL10 following LPS/IFN-γ treatment for 16h. As shown in Figure 2b, pretreatment of MonoMac6 cells with various concentrations of ganodermycin and stimulation with LPS/IFN-γ for 16h resulted in a dose-dependent inhibition of CXCL10 synthesis and excretion with IC50 values around 40μgml−1 (142μM). Cytotoxic properties of ganodermycin were evaluated against MonoMac6 cells by measuring the reduction of the tetrazolium compound 2,3-bis(2-methoxy-4-nitro-5-sulfophenyl)-2H-tetrazolium-5-carboxanilide sodium into a colored formazan product, which is directly proportional to the living cells in culture. No cytotoxic activities against MonoMac6 cells could be observed up to 60μgml−1 (213μM) of the compound during a 24-h incubation period (Figure 2b). In addition, antifungal activities against the yeast Nematospora coryli and antibacterial activities against the Gram-positive bacteria Bacillus subtilis, Bacillus brevis and Micrococcus luteus could be observed at concentrations starting at 50μg per disc in the agar diffusion assay (Table 1).

The structurally related compound hymenoic acid, isolated from a Hymenochaetaceae species, has recently been described as a selective inhibitor of the human DNA polymerase-λ, which has a role in base excision repair and in non-homologous end joining of DNA double-strand breaks in DNA-damaged cells with an IC50 value of 91.7μM.8 Our data show that ganodermycin interferes with STAT1-, NF-κB- and IRF-dependent signal transduction pathways, which participate in the transcriptional activation of the CXCL10 gene. In addition the compound exhibited no cytotoxic effects up to 213μM. In summary, we have identified a novel inhibitor of CXCL10 expression, which may serve as lead structure for the development of transcriptionally based inhibitors of chronic inflammatory disorders. Further investigations on the cellular targets and the mode of action of ganodermycin are now under way.



Producing organism

The producing fungus Ganoderma applanatum (IBWF09003) is deposited in the culture collection of the Institute of Biotechnology and Drug Research (IBWF eV), Kaiserslautern, Germany. The fungus was identified by PCR amplification and ITS sequence analysis of the ITS1-5.8S rDNA-ITS2 region of nuclear DNA as described previously.15 For maintenance, the fungus was grown on HA agar slants (yeast extract 0.4%, malt extract 1%, glucose 0.4%, the pH value was adjusted to 5.5 before autoclaving). Solid media contained 2% of the agar.

Fermentation and isolation of ganodermycin

Well-grown seed cultures of the producing strain (200ml HA medium) were used to inoculate a Biolafitte C-6 fermenter (DCI-Biolafitte, Mauze, France) containing 20l of HA medium with aeration (3.0l airmin−1) and stirring (120r.p.m.) at 22°C. The production of ganodermycin was followed by the inhibitory effect of various concentrations of a crude extract of the culture fluid in the CXCL10 promoter-dependent reporter gene assay as described below. The compound was isolated from the culture fluid by bioactivity-guided fractionation using the transcriptional reporter assay in MonoMac6 cells. After 9 days, the culture fluid was separated from the mycelia by filtration, extracted twice with an equal volume of EtOAc and dried over Na2SO4. After concentration in vacuo, the crude extract (8.3g) was fractionated by subsequent chromatography on silica gel (Merck 60, eluent:cyclohexane:EtOAc, 50:50 v/v) (Merck, Darmstadt, Germany). The enriched product (469mg) was further purified by preparative HPLC (Macherey & Nagel, Düren, Germany; Nucleosil RP18; column 250 × 21mm, flow 20mlmin−1; gradients: 0.1% HCOOH–MeCN 30–60% in 20min, 60–100% in 5min) to yield 88mg pure ganodermycin. Using ultraviolet detection at 210 and 250nm, the retention time of the fractions containing ganodermycin was 18min.


1H NMR (400MHz) and 13C NMR (101MHz) were recorded with a Bruker (Bremen, Germany) Avance-II spectrometer equipped with a 5mm BBO probehead. The spectra were measured in CDCl3, and the chemical shifts were referenced to the residual solvent signal (δH=7.26p.p.m. and δC=77.16p.p.m.).16 APCI-MS spectra were measured from a solution of the analyte in acetonitrile/water with a Hewlett Packard MSD 1100 (Agilent, Waldbronn, Germany) using an evaporator temperature of 400°C and a drying gas temperature of 350°C at a flow of 6lh−1 (N2). In positive ionization mode, the capillary voltage amounted to 3.5kV and the corona discharge current was 4μA. In negative ionization mode, the capillary voltage amounted to 2.2kV and the corona discharge current was 6μA. ESI-HRMS data were measured from a solution of the analyte in acetonitrile with a Waters (Eschborn, Germany) Q-TOF-Ultima 3 equipped with a LockSpray interface (tri-n-octylamine as external reference). IR and UV spectra were measured with a Bruker IFS48 FTIR spectrometer and a Perkin-Elmer Lambda-16 spectrophotometer (Perkin-Elmer, Rodgau, Germany), respectively. The optical rotation was measured on a Perkin-Elmer 241 polarimeter at 578nm and 546nm and extrapolated to 589nm using Drude's equation.


Yellow oil; (Figure 3) [α]D22 (c 0.41, CDCl3) –21; ultraviolet λmaxMeOH (nm; log ε) 250 (4.06); infrared νmax (KBr; cm–1) 3434, 2932, 1698, 1391, 1203 and 1100; APCI-MS (negative) m/z 279.1 (100) [M–H]; ESI-HRMS m/z 303.1220 (calculated for C15H20O5+Na+ 303.1208). 1H and 13C nuclear magnetic resonanceNMR data are presented in Table 2.

Figure 3.
Figure 3 - Unfortunately we are unable to provide accessible alternative text for this. If you require assistance to access this image, please contact help@nature.com or the author

Structure of ganodermycin.

Full figure and legend (29K)

Biological assays

MonoMac6 (DSMZ ACC124) cells were maintained in RPMI 1640 medium containing 25mM HEPES buffer, 2mM L-glutamine, supplemented with 10% fetal calf serum, 100Uml−1 penicillin and 100μgml−1 streptomycin at 37°C and 5% CO2. The assays for antimicrobial activity were carried out as described previously.17 The cytotoxicity against MonoMac6 cells was determined in an 2,3-bis(2-methoxy-4-nitro-5-sulfophenyl)-2H-tetrazolium-5-carboxanilide sodium-based cell viability assay.18

The 972-bp human CXCL10 promoter (−875 to +97 relative to the transcription start site) was cloned into the pGL4 basic vector (Promega, Mannheim, Germany) to generate the hCXCL10 promoter-driven luciferase reporter plasmid. The plasmid pRL-EF1α for normalizing transfection efficiency was obtained from Promega. The NF-κB-, Stat1- and IRF-driven reporter plasmids pNFκB-Luc, pGAS-Luc and pISRE-Luc, respectively, were obtained from Clontech (Saint-Germain-en-Laye, France). Transient transfections of MonoMac6 cells were performed by electroporation (Bio-Rad, Munich, Germany, Gen Pulser) 3 × 107cellsml−1 in 0.4ml RPMI 1640 medium containing 25mM HEPES buffer together with 40μg of the indicated plasmids at 200V and 975μF.19 After electroporation the cells were seeded at 1 × 106cellsml−1 RPMI 1640 medium containing 10% fetal calf serum in a 24-well plate with and without test compounds, and luciferase expression was induced with 1μgml−1 LPS and 10ngml−1 IFN-γ. Luciferase activity was measured 4h after induction using the luciferase assay system (Promega) according to the manufacturer's instructions with a luminometer.

For analyzing CXCL10 synthesis, MonoMac6 cells were starved for 16h in RPMI 1640 medium containing 0.5% fetal calf serum, pretreated for 1h with the test compound and subsequently induced with 1μgml−1 LPS and 10ngml−1 IFN-γ for additional 16h. Subsequently, the cells were centrifuged and the cell culture supernatant was analyzed using the CXCL10 ELISA kit (R&D Systems, Wiesbaden-Nordenstadt, Germany) according to the manufacturer's instructions.


Conflict of interest

The authors declare no conflict of interest.



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This work was supported by a grant from the Stiftung Rheinland-Pfalz für Innovation. We thank Professor Dr T Anke for providing Gonoderma applanatum (IBWF09003), Dr N Hanold for mass spectrometric analyses and A Meffert for expert technical assistance.