TABLE OF CONTENTS
Volume 3, Issue 5 (May 2009)
Original Articles
Microbial Population and Community Ecology
Discriminative detection and enumeration of microbial life in marine subsurface sediments
Yuki Morono, Takeshi Terada, Noriaki Masui and Fumio Inagaki
ISME J 3: 503-511; advance online publication, February 12, 2009; doi:10.1038/ismej.2009.1
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbial population and community ecology
Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata
Shinichi Sunagawa, Todd Z DeSantis, Yvette M Piceno, Eoin L Brodie, Michael K DeSalvo, Christian R Voolstra, Ernesto Weil, Gary L Andersen and Mónica Medina
ISME J 3: 512-521; advance online publication, January 8, 2009; doi:10.1038/ismej.2008.131
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbial population and community ecology
Quantitative detection of culturable methanogenic archaea abundance in anaerobic treatment systems using the sequence-specific rRNA cleavage method
Takashi Narihiro, Takeshi Terada, Akiko Ohashi, Jer-Horng Wu, Wen-Tso Liu, Nobuo Araki, Yoichi Kamagata, Kazunori Nakamura and Yuji Sekiguchi
ISME J 3: 522-535; advance online publication, February 12, 2009; doi:10.1038/ismej.2009.4
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbial population and community ecology
Microbe-Microbe and Microbe-Host Interactions
Culture-independent identification of gut bacteria correlated with the onset of diabetes in a rat model
Luiz FW Roesch, Graciela L Lorca, George Casella, Adriana Giongo, Andres Naranjo, Arianna M Pionzio, Nan Li, Volker Mai, Clive H Wasserfall, Desmond Schatz, Mark A Atkinson, Josef Neu and Eric W Triplett
ISME J 3: 536-548; advance online publication, February 19, 2009; doi:10.1038/ismej.2009.5
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbe-microbe and microbe-host interactions
Evolutionary Genetics
Horizontal gene transfer between Ralstonia solanacearum strains detected by comparative genomic hybridization on microarrays
Alice Guidot, Bénédicte Coupat, Saliou Fall, Philippe Prior and Franck Bertolla
ISME J 3: 549-562; advance online publication, February 26, 2009; doi:10.1038/ismej.2009.14
Subject Category: Evolutionary genetics
Microbial Ecology and Functional Diversity of Natural Habitats
The alkaline phosphatase PhoX is more widely distributed in marine bacteria than the classical PhoA
Marta Sebastian and James W Ammerman
ISME J 3: 563-572; advance online publication, February 12, 2009; doi:10.1038/ismej.2009.10
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbial ecology and functional diversity of natural habitats
Molecular and morphological characterization of cyanobacterial diversity in the stromatolites of Highborne Cay, Bahamas
Jamie S Foster, Stefan J Green, Steven R Ahrendt, Stjepko Golubic, R Pamela Reid, Kevin L Hetherington and Lee Bebout
ISME J 3: 573-587; advance online publication, January 15, 2009; doi:10.1038/ismej.2008.129
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbial ecology and functional diversity of natural habitats
Grazing rates and functional diversity of uncultured heterotrophic flagellates
Ramon Massana, Fernando Unrein, Raquel Rodríguez-Martínez, Irene Forn, Thomas Lefort, Jarone Pinhassi and Fabrice Not
ISME J 3: 588-596; advance online publication, January 8, 2009; doi:10.1038/ismej.2008.130
Subject Category: Microbial ecology and functional diversity of natural habitats
Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment
Sara Hallin, Christopher M Jones, Michael Schloter and Laurent Philippot
ISME J 3: 597-605; advance online publication, January 15, 2009; doi:10.1038/ismej.2008.128
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbial ecology and functional diversity of natural habitats
A reanalysis of phospholipid fatty acids as ecological biomarkers for methanotrophic bacteria
Paul L E Bodelier, Marie-José Bär Gillisen, Kees Hordijk, Jaap S Sinninghe Damsté, W Irene C Rijpstra, Jan A J Geenevasen and Peter F Dunfield
ISME J 3: 606-617; advance online publication, February 5, 2009; doi:10.1038/ismej.2009.6
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbial ecology and functional diversity of natural habitats
In situ transcriptomic analysis of the globally important keystone N2-fixing taxon Crocosphaera watsonii
Ian Hewson, Rachel S Poretsky, Roxanne A Beinart, Angelicque E White, Tuo Shi, Shellie R Bench, Pia H Moisander, Ryan W Paerl, H James Tripp, Joseph P Montoya, Mary Ann Moran and Jonathan P Zehr
ISME J 3: 618-631; advance online publication, February 19, 2009; doi:10.1038/ismej.2009.8
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbial ecology and functional diversity of natural habitats
Short Communication
Microbial population and community ecology
Siderophore production and biofilm formation as linked social traits
Freya Harrison and Angus Buckling
ISME J 3: 632-634; advance online publication, February 19, 2009; doi:10.1038/ismej.2009.9
Abstract | Full Text | PDF | Supplementary information
Subject Category: Microbial population and community ecology
